BLASTX nr result
ID: Cnidium21_contig00008081
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00008081
(1258 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003536743.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-... 105 2e-35
ref|XP_003555834.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-... 104 4e-35
ref|XP_002273623.1| PREDICTED: E3 ubiquitin-protein ligase CIP8 ... 105 4e-33
ref|XP_002866641.1| hypothetical protein ARALYDRAFT_496711 [Arab... 97 2e-29
ref|NP_201297.1| E3 ubiquitin-protein ligase CIP8 [Arabidopsis t... 98 3e-29
>ref|XP_003536743.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-like isoform 1 [Glycine
max] gi|356536437|ref|XP_003536744.1| PREDICTED: E3
ubiquitin-protein ligase CIP8-like isoform 2 [Glycine
max]
Length = 333
Score = 105 bits (261), Expect(3) = 2e-35
Identities = 40/54 (74%), Positives = 49/54 (90%)
Frame = -2
Query: 687 CAVCKDMVNVGEIAKELPCGHAYHGDCIVPWLASRNTCPVCRFELPTSDPDYEE 526
CA+CKD++ VG++AK LPCGH YHGDCIVPWL+SRN+CPVCR+ELPT D +YEE
Sbjct: 262 CAICKDLLGVGDLAKRLPCGHGYHGDCIVPWLSSRNSCPVCRYELPTDDKEYEE 315
Score = 67.4 bits (163), Expect(3) = 2e-35
Identities = 39/77 (50%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Frame = -1
Query: 982 DILMGFEDHSIEFRLH--GGPAYVGNPGDYVDADGYEAVLRNLAETDXXXXXXXXXXAES 809
+ILMG ED+SIEFRL YVGNP DYVDA YEA+L LAE+D +++
Sbjct: 184 EILMGLEDNSIEFRLQLPESDRYVGNPEDYVDAAEYEALLHTLAESDGGGRRGAPPASKA 243
Query: 808 AVLALKNLQIKSEKEAL 758
AV AL ++I SE EA+
Sbjct: 244 AVEALPTVKIASESEAV 260
Score = 25.0 bits (53), Expect(3) = 2e-35
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3
Query: 1097 ATRGTSRRERILDWA 1053
ATR S R RILDWA
Sbjct: 169 ATRTRSMRNRILDWA 183
>ref|XP_003555834.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-like [Glycine max]
Length = 337
Score = 104 bits (260), Expect(3) = 4e-35
Identities = 41/54 (75%), Positives = 48/54 (88%)
Frame = -2
Query: 687 CAVCKDMVNVGEIAKELPCGHAYHGDCIVPWLASRNTCPVCRFELPTSDPDYEE 526
CA+CKD++ VG+ AK LPCGH YHGDCIVPWL+SRN+CPVCRFELPT D +YEE
Sbjct: 259 CAICKDLLGVGDAAKRLPCGHRYHGDCIVPWLSSRNSCPVCRFELPTDDKEYEE 312
Score = 66.6 bits (161), Expect(3) = 4e-35
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Frame = -1
Query: 982 DILMGFEDHSIEFRLH--GGPAYVGNPGDYVDADGYEAVLRNLAETDXXXXXXXXXXAES 809
+ILMG ED+SIEFRL YVGNP DYVDA YEA+L+ LAE+D +++
Sbjct: 181 EILMGLEDNSIEFRLQLPESDRYVGNPEDYVDAAEYEALLQTLAESDGGGRRGAPPASKA 240
Query: 808 AVLALKNLQIKSEKEAL 758
A+ AL ++I SE EA+
Sbjct: 241 ALEALPTVKIASESEAV 257
Score = 25.0 bits (53), Expect(3) = 4e-35
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3
Query: 1097 ATRGTSRRERILDWA 1053
ATR S R RILDWA
Sbjct: 166 ATRTRSMRNRILDWA 180
>ref|XP_002273623.1| PREDICTED: E3 ubiquitin-protein ligase CIP8 isoform 1 [Vitis
vinifera] gi|359492263|ref|XP_003634390.1| PREDICTED: E3
ubiquitin-protein ligase CIP8 isoform 2 [Vitis vinifera]
gi|147826680|emb|CAN66109.1| hypothetical protein
VITISV_007725 [Vitis vinifera]
Length = 334
Score = 105 bits (262), Expect(2) = 4e-33
Identities = 42/57 (73%), Positives = 51/57 (89%)
Frame = -2
Query: 687 CAVCKDMVNVGEIAKELPCGHAYHGDCIVPWLASRNTCPVCRFELPTSDPDYEEGKK 517
CA+CKD+V++ EIA++LPCGH YHGDCIVPWL SRN+CPVCRFELPT D +YEE +K
Sbjct: 257 CAICKDVVSICEIARKLPCGHGYHGDCIVPWLNSRNSCPVCRFELPTDDSEYEEERK 313
Score = 63.5 bits (153), Expect(2) = 4e-33
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Frame = -1
Query: 979 ILMGFEDHSIEF--RLHGGPAYVGNPGDYVDADGYEAVLRNLAETDXXXXXXXXXXAESA 806
ILM ED +IEF ++ Y GNP DYVDA GYE +L+NLAE+D ++SA
Sbjct: 180 ILMASEDSTIEFHFQMPEPEGYTGNPEDYVDAAGYEELLQNLAESDGAARRGAPPASKSA 239
Query: 805 VLALKNLQIKSEKEAL 758
+ AL +++IKSE++ L
Sbjct: 240 ISALPSVEIKSEEQVL 255
>ref|XP_002866641.1| hypothetical protein ARALYDRAFT_496711 [Arabidopsis lyrata subsp.
lyrata] gi|297312476|gb|EFH42900.1| hypothetical protein
ARALYDRAFT_496711 [Arabidopsis lyrata subsp. lyrata]
Length = 330
Score = 96.7 bits (239), Expect(3) = 2e-29
Identities = 38/58 (65%), Positives = 48/58 (82%)
Frame = -2
Query: 690 LCAVCKDMVNVGEIAKELPCGHAYHGDCIVPWLASRNTCPVCRFELPTSDPDYEEGKK 517
+CAVCKD + +GE K+LPCGH YHGDCI+PWL +RN+CPVCRF+L T D +YEE +K
Sbjct: 254 VCAVCKDGMVMGETGKKLPCGHCYHGDCIMPWLGTRNSCPVCRFQLQTDDAEYEEERK 311
Score = 57.4 bits (137), Expect(3) = 2e-29
Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Frame = -1
Query: 982 DILMGFEDHSIEFRLHGGPAYVGNPGDYV-DADGYEAVLRNLAETD--XXXXXXXXXXAE 812
+ILMG ED+SIEFR+ Y GNP DY+ D+ GYEA+L+NLAE D A+
Sbjct: 175 EILMGIEDNSIEFRME-SERYTGNPADYIDDSAGYEALLQNLAEGDGGGGGRRGAPPAAK 233
Query: 811 SAVLALKNLQIKSEK 767
SA+ AL+ Q+ S +
Sbjct: 234 SAIEALETFQVTSSE 248
Score = 22.7 bits (47), Expect(3) = 2e-29
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 1094 TRGTSRRERILDWA 1053
TR + R RILDWA
Sbjct: 161 TRSRTGRNRILDWA 174
>ref|NP_201297.1| E3 ubiquitin-protein ligase CIP8 [Arabidopsis thaliana]
gi|61211690|sp|Q9SPL2.1|CIP8_ARATH RecName: Full=E3
ubiquitin-protein ligase CIP8; AltName:
Full=COP1-interacting protein 8
gi|5929906|gb|AAD56636.1|AF162150_1 COP1-interacting
protein CIP8 [Arabidopsis thaliana]
gi|8843756|dbj|BAA97304.1| COP1-interacting protein CIP8
[Arabidopsis thaliana] gi|19698865|gb|AAL91168.1|
COP1-interacting protein CIP8 [Arabidopsis thaliana]
gi|30984560|gb|AAP42743.1| At5g64920 [Arabidopsis
thaliana] gi|111146876|gb|ABH07378.1| COP1-interacting
protein 8 [Arabidopsis thaliana]
gi|332010587|gb|AED97970.1| E3 ubiquitin-protein ligase
CIP8 [Arabidopsis thaliana]
Length = 334
Score = 97.8 bits (242), Expect(3) = 3e-29
Identities = 39/58 (67%), Positives = 48/58 (82%)
Frame = -2
Query: 690 LCAVCKDMVNVGEIAKELPCGHAYHGDCIVPWLASRNTCPVCRFELPTSDPDYEEGKK 517
+CAVCKD + +GE K+LPCGH YHGDCIVPWL +RN+CPVCRF+L T D +YEE +K
Sbjct: 256 VCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCRFQLETDDAEYEEERK 313
Score = 57.4 bits (137), Expect(3) = 3e-29
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Frame = -1
Query: 982 DILMGFEDHSIEFRLHGGPAYVGNPGDYV-DADGYEAVLRNLAETD---XXXXXXXXXXA 815
+ILMG ED+SIEFR+ Y GNP DY+ DA GYEA+L+NLAE D A
Sbjct: 176 EILMGIEDNSIEFRME-SDRYAGNPADYIDDAAGYEALLQNLAEGDGGGGGGRRGAPPAA 234
Query: 814 ESAVLALKNLQIKSEK 767
+SA+ AL+ ++ S +
Sbjct: 235 KSAIEALETFEVSSSE 250
Score = 21.2 bits (43), Expect(3) = 3e-29
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 1094 TRGTSRRERILDWA 1053
T+ + R RILDWA
Sbjct: 162 TQSRTGRNRILDWA 175