BLASTX nr result

ID: Cnidium21_contig00008069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008069
         (1149 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADW66146.1| RING-H2 zinc finger protein [Solanum nigrum]           151   3e-34
emb|CAN82068.1| hypothetical protein VITISV_037474 [Vitis vinifera]   136   1e-29
ref|XP_002533895.1| RING-H2 finger protein ATL3J, putative [Rici...   135   3e-29
ref|XP_002264718.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...   134   3e-29
ref|NP_001240255.1| uncharacterized protein LOC100786803 [Glycin...   130   5e-28

>gb|ADW66146.1| RING-H2 zinc finger protein [Solanum nigrum]
          Length = 144

 Score =  151 bits (381), Expect = 3e-34
 Identities = 74/127 (58%), Positives = 91/127 (71%), Gaps = 1/127 (0%)
 Frame = +2

Query: 767  MGLSPYPTPVDAGVLCLILVNTAKSVSAMKKIVWFILHSLGI-VVSWDEYTTESPIDLSG 943
            MGLSPY TP DAGV C+ILVNTA S+S +K +V  ILH +GI   SW+EY+ E P+D   
Sbjct: 1    MGLSPYTTPADAGVFCVILVNTATSISIVKGMVRSILHVIGINFASWEEYSIEGPLDPFE 60

Query: 944  NRDSCLETSIEEFRSQLPAISYDSVCSYKQLEHECTVCLTEFNPEAVINHLSCGHVFHEI 1123
             R S   + +EEFRS+ PA+ YDS+C       EC VCL +FN +A INHLSCGHVFH++
Sbjct: 61   CRGSPSGSYMEEFRSRTPAVRYDSLCISNLPTQECPVCLADFNHDAEINHLSCGHVFHKL 120

Query: 1124 CLEKWLK 1144
            CLEKWLK
Sbjct: 121  CLEKWLK 127


>emb|CAN82068.1| hypothetical protein VITISV_037474 [Vitis vinifera]
          Length = 223

 Score =  136 bits (342), Expect = 1e-29
 Identities = 71/132 (53%), Positives = 91/132 (68%), Gaps = 3/132 (2%)
 Frame = +2

Query: 761  SDMGLSPYPTPVDAGVLCLILVNTAKSVSAMKKIVWFILHSLGIVVSWDEYTTESPIDLS 940
            S MGLS  P P + GVLC++LVNTA S+S  K IV  ILH +GI +S    +++SP   S
Sbjct: 71   SSMGLSSLPAPSE-GVLCVLLVNTALSISIFKGIVRAILHVIGIHLSATPSSSDSPEPTS 129

Query: 941  GN---RDSCLETSIEEFRSQLPAISYDSVCSYKQLEHECTVCLTEFNPEAVINHLSCGHV 1111
                 R +  ET +EEFRS+ PAI +D+VCS K+ EH+C VCLT F P++ INHL CGH 
Sbjct: 130  EPFEFRRNPSETCMEEFRSRNPAIRFDTVCSCKRPEHDCAVCLTRFEPDSEINHLPCGHF 189

Query: 1112 FHEICLEKWLKY 1147
            FH++CLEKWL Y
Sbjct: 190  FHKVCLEKWLDY 201


>ref|XP_002533895.1| RING-H2 finger protein ATL3J, putative [Ricinus communis]
            gi|223526146|gb|EEF28485.1| RING-H2 finger protein ATL3J,
            putative [Ricinus communis]
          Length = 156

 Score =  135 bits (339), Expect = 3e-29
 Identities = 72/133 (54%), Positives = 89/133 (66%), Gaps = 6/133 (4%)
 Frame = +2

Query: 767  MGLSPYPTPVDAGVLCLILVNTAKSVSAMKKIVWFILHSLGIVVSWDEYTT------ESP 928
            MGLS  P P + GVLC++LVNTA S+S  K IV  ILH +GI +S    +T      E P
Sbjct: 1    MGLSSLPAPSE-GVLCVLLVNTALSISIFKGIVRSILHIVGIRLSSSSSSTASSDYNEDP 59

Query: 929  IDLSGNRDSCLETSIEEFRSQLPAISYDSVCSYKQLEHECTVCLTEFNPEAVINHLSCGH 1108
             DL   R    E+ I EFRS+ PA  +DSVC  KQ+EH+C+VCLT F PE+ IN LSCGH
Sbjct: 60   TDLFEFRLPPSESYINEFRSRTPATRFDSVCRCKQIEHDCSVCLTRFEPESEINCLSCGH 119

Query: 1109 VFHEICLEKWLKY 1147
            +FH++CLEKWL Y
Sbjct: 120  LFHKVCLEKWLDY 132


>ref|XP_002264718.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B [Vitis vinifera]
          Length = 151

 Score =  134 bits (338), Expect = 3e-29
 Identities = 70/130 (53%), Positives = 90/130 (69%), Gaps = 3/130 (2%)
 Frame = +2

Query: 767  MGLSPYPTPVDAGVLCLILVNTAKSVSAMKKIVWFILHSLGIVVSWDEYTTESPIDLSGN 946
            MGLS  P P + GVLC++LVNTA S+S  K IV  ILH +GI +S    +++SP   S  
Sbjct: 1    MGLSSLPAPSE-GVLCVLLVNTALSISIFKGIVRAILHVIGIHLSATPSSSDSPEPTSEP 59

Query: 947  ---RDSCLETSIEEFRSQLPAISYDSVCSYKQLEHECTVCLTEFNPEAVINHLSCGHVFH 1117
               R +  ET +EEFRS+ PAI +D+VCS K+ EH+C VCLT F P++ INHL CGH FH
Sbjct: 60   FEFRRNPSETCMEEFRSRNPAIRFDTVCSCKRPEHDCAVCLTRFEPDSEINHLPCGHFFH 119

Query: 1118 EICLEKWLKY 1147
            ++CLEKWL Y
Sbjct: 120  KVCLEKWLDY 129


>ref|NP_001240255.1| uncharacterized protein LOC100786803 [Glycine max]
            gi|255639664|gb|ACU20126.1| unknown [Glycine max]
          Length = 155

 Score =  130 bits (328), Expect = 5e-28
 Identities = 69/134 (51%), Positives = 87/134 (64%), Gaps = 7/134 (5%)
 Frame = +2

Query: 767  MGLSPYPTPVDAGVLCLILVNTAKSVSAMKKIVWFILHSLGIVVSWDEYTTESPIDLSGN 946
            MGLS  P P + GVLC++LVNT  S+S  K IV  ILH +GI +S    T+ S  D S  
Sbjct: 1    MGLSSLPAPSE-GVLCVLLVNTVLSISIFKGIVRTILHIVGIHLSSSSSTSPSSPDPSLT 59

Query: 947  RDSCLE-------TSIEEFRSQLPAISYDSVCSYKQLEHECTVCLTEFNPEAVINHLSCG 1105
                 E       + IEEFRS+ P + +DSVC  KQ EH+C+VCLT+F PE+ IN LSCG
Sbjct: 60   APESFEFHLSPSESYIEEFRSRTPTLRFDSVCCCKQPEHDCSVCLTQFEPESEINRLSCG 119

Query: 1106 HVFHEICLEKWLKY 1147
            H+FH++CLEKWL Y
Sbjct: 120  HLFHKVCLEKWLDY 133


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