BLASTX nr result

ID: Cnidium21_contig00008013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008013
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270733.1| PREDICTED: protein EARLY FLOWERING 4 [Vitis ...    98   2e-18
ref|XP_002311221.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
gb|AAW22881.1| putative EARLY flowering 4 protein [Solanum lycop...    91   2e-16
ref|XP_002533647.1| conserved hypothetical protein [Ricinus comm...    91   3e-16
gb|ADQ20089.1| ELF4 protein [Manihot esculenta]                        89   6e-16

>ref|XP_002270733.1| PREDICTED: protein EARLY FLOWERING 4 [Vitis vinifera]
           gi|297736609|emb|CBI25480.3| unnamed protein product
           [Vitis vinifera]
          Length = 145

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 47/58 (81%), Positives = 51/58 (87%)
 Frame = +2

Query: 215 SGDVWRNFTDSFRQVQSILDLNRVLIQQVNENHQSKIHDNMVKNVGLIQEINGNITKV 388
           S +VW  F DSFRQVQS+LD NRVLIQQVNENHQSKI DN+VKNV LIQEINGNI+KV
Sbjct: 48  SAEVWETFNDSFRQVQSVLDRNRVLIQQVNENHQSKIPDNLVKNVALIQEINGNISKV 105


>ref|XP_002311221.1| predicted protein [Populus trichocarpa] gi|222851041|gb|EEE88588.1|
           predicted protein [Populus trichocarpa]
          Length = 122

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 55/105 (52%), Positives = 65/105 (61%)
 Frame = +2

Query: 74  MTSPQNSLSPAESSMDHDFSSSHPTPQTLIXXXXXXXXXXXXAVDTTSGDVWRNFTDSFR 253
           M +  +S S AESSM+   + S  T Q                 D    +VW  F +SFR
Sbjct: 1   MNTTLDSFSAAESSMEDTSNPSITTNQNA------------NKEDEVDAEVWATFNNSFR 48

Query: 254 QVQSILDLNRVLIQQVNENHQSKIHDNMVKNVGLIQEINGNITKV 388
           QVQS+LD NRVLIQQVNENHQS+  DNMVKNV LIQE+NGNI+KV
Sbjct: 49  QVQSVLDRNRVLIQQVNENHQSRTPDNMVKNVSLIQELNGNISKV 93


>gb|AAW22881.1| putative EARLY flowering 4 protein [Solanum lycopersicum]
          Length = 121

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 42/58 (72%), Positives = 50/58 (86%)
 Frame = +2

Query: 215 SGDVWRNFTDSFRQVQSILDLNRVLIQQVNENHQSKIHDNMVKNVGLIQEINGNITKV 388
           + DVW NF++ FRQVQS+LD NR LIQQVNENHQS+  DNMV+NV LIQE+NGNI+KV
Sbjct: 35  NSDVWNNFSNRFRQVQSVLDRNRSLIQQVNENHQSRTTDNMVRNVSLIQELNGNISKV 92


>ref|XP_002533647.1| conserved hypothetical protein [Ricinus communis]
           gi|223526460|gb|EEF28735.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 137

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 46/81 (56%), Positives = 53/81 (65%)
 Frame = +2

Query: 224 VWRNFTDSFRQVQSILDLNRVLIQQVNENHQSKIHDNMVKNVGLIQEINGNITKVKXXXX 403
           VW  F  +FRQVQS+LD NR LIQQVNENHQS+I DNMVKNV LIQE+NGNI+KV     
Sbjct: 49  VWSTFNTTFRQVQSVLDRNRSLIQQVNENHQSRIPDNMVKNVALIQELNGNISKVVSLYS 108

Query: 404 XXXXXXXXXXXXGQDGTGGGN 466
                        ++G G GN
Sbjct: 109 DLNSNFSSSYHQHRNGNGSGN 129


>gb|ADQ20089.1| ELF4 protein [Manihot esculenta]
          Length = 115

 Score = 89.4 bits (220), Expect = 6e-16
 Identities = 43/61 (70%), Positives = 49/61 (80%)
 Frame = +2

Query: 206 DTTSGDVWRNFTDSFRQVQSILDLNRVLIQQVNENHQSKIHDNMVKNVGLIQEINGNITK 385
           D    +VW  F  +FRQVQS+LD NR LIQQVNENHQS+I DNMVKNV LIQE+NGNI+K
Sbjct: 23  DEGDPEVWSTFNSTFRQVQSVLDRNRNLIQQVNENHQSRIPDNMVKNVALIQELNGNISK 82

Query: 386 V 388
           V
Sbjct: 83  V 83


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