BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007978
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    60   1e-07
gb|ABO92988.1| F-box domain-containing protein [Solanum tuberosum]     60   2e-07
gb|ABO92989.1| F-box domain-containing protein [Solanum tuberosum]     59   5e-07
ref|XP_002867770.1| hypothetical protein ARALYDRAFT_329378 [Arab...    58   7e-07
gb|AAU93581.1| Putative F-box protein, identical [Solanum demiss...    58   9e-07

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
 Frame = -3

Query: 270 EFNDPLKTLLTDAHYVGASNGFICVFKNEMNDVFLINPTTRKFKKIARSPPEFPTSFGPV 91
           E N PL         +G+ NG +C+  N ++D+ + NP+TRK + +   P E    FG  
Sbjct: 84  ELNHPLMCYNHGIKVLGSVNGLLCI-SNVVDDIAVWNPSTRKHRVVPFLPIELKRYFGTK 142

Query: 90  DNSMC--GFGYDQVNDDYKVVKIAQ 22
             S+   GFGYD V DDYK+V+IAQ
Sbjct: 143 SCSVYVFGFGYDSVRDDYKLVRIAQ 167


>gb|ABO92988.1| F-box domain-containing protein [Solanum tuberosum]
          Length = 424

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/74 (43%), Positives = 44/74 (59%)
 Frame = -3

Query: 228 YVGASNGFICVFKNEMNDVFLINPTTRKFKKIARSPPEFPTSFGPVDNSMCGFGYDQVND 49
           +VG+ NG IC+F N   D ++ NPT RK KK+ +S      S+G    +  GFG+D   D
Sbjct: 132 FVGSVNGLICLF-NRRRDTYIWNPTIRKSKKLPKS------SWGTSCYTKYGFGFDDSRD 184

Query: 48  DYKVVKIAQCYNAY 7
           DYKV+ I  C N+Y
Sbjct: 185 DYKVLFIDHCGNSY 198


>gb|ABO92989.1| F-box domain-containing protein [Solanum tuberosum]
          Length = 404

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/74 (41%), Positives = 42/74 (56%)
 Frame = -3

Query: 228 YVGASNGFICVFKNEMNDVFLINPTTRKFKKIARSPPEFPTSFGPVDNSMCGFGYDQVND 49
           +VG+ NG IC+F N   D ++ NP  RK KK+ +S      S+G    +  GFGYD   D
Sbjct: 132 FVGSVNGLICLF-NRRRDTYIWNPAIRKSKKLVKS------SWGTSCYTKYGFGYDDSRD 184

Query: 48  DYKVVKIAQCYNAY 7
           DYK + I  C N+Y
Sbjct: 185 DYKALFIDHCGNSY 198


>ref|XP_002867770.1| hypothetical protein ARALYDRAFT_329378 [Arabidopsis lyrata subsp.
           lyrata] gi|297313606|gb|EFH44029.1| hypothetical protein
           ARALYDRAFT_329378 [Arabidopsis lyrata subsp. lyrata]
          Length = 406

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
 Frame = -3

Query: 276 VVEFNDPLKTL-LTDAHYVGASNGFICVFKNEMNDVFLINPTTRKFKKIARSPPEFPTSF 100
           V +   PLKT  LT+    G+ NG I +  N   D+ + NP+TR+  ++     +FP   
Sbjct: 76  VTDVEHPLKTGGLTEVF--GSCNGLIGL-SNSPTDIAIFNPSTRQIHRLPAESVDFPEGS 132

Query: 99  GPVDNSMCGFGYDQVNDDYKVVKIAQC 19
                   GFGYD VNDDYKVV++ QC
Sbjct: 133 TTRGYVFYGFGYDSVNDDYKVVRMVQC 159


>gb|AAU93581.1| Putative F-box protein, identical [Solanum demissum]
           gi|142942419|gb|ABO92994.1| F-box domain-containing
           protein [Solanum tuberosum]
          Length = 383

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/83 (36%), Positives = 43/83 (51%)
 Frame = -3

Query: 276 VVEFNDPLKTLLTDAHYVGASNGFICVFKNEMNDVFLINPTTRKFKKIARSPPEFPTSFG 97
           ++  + P++      H VG+ NG ICV      + ++ NP   K K++ +S     TS  
Sbjct: 93  ILHIDSPIERTTLSTHIVGSVNGLICVAHVRQREAYIWNPAITKSKELPKS-----TSNL 147

Query: 96  PVDNSMCGFGYDQVNDDYKVVKI 28
             D   CGFGYD+  DDYKVV I
Sbjct: 148 CSDGIKCGFGYDESRDDYKVVFI 170