BLASTX nr result

ID: Cnidium21_contig00007913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007913
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002869158.1| hypothetical protein ARALYDRAFT_491238 [Arab...   154   1e-35
ref|XP_002272147.1| PREDICTED: upstream activation factor subuni...   153   4e-35
emb|CAN78429.1| hypothetical protein VITISV_011142 [Vitis vinifera]   153   4e-35
gb|AAK62445.1|AF387000_1 putative protein [Arabidopsis thaliana]      151   1e-34
ref|NP_195155.1| SWIB/MDM2 domain-containing protein [Arabidopsi...   151   2e-34

>ref|XP_002869158.1| hypothetical protein ARALYDRAFT_491238 [Arabidopsis lyrata subsp.
           lyrata] gi|297314994|gb|EFH45417.1| hypothetical protein
           ARALYDRAFT_491238 [Arabidopsis lyrata subsp. lyrata]
          Length = 144

 Score =  154 bits (390), Expect = 1e-35
 Identities = 79/137 (57%), Positives = 94/137 (68%)
 Frame = +2

Query: 2   TTLFAVTTPAAVKSSCFPVPKKAIFVLNNPCSANMHRLTCATSATPKAVKETKKIREPRG 181
           +T F     A  +SS    P       + P +  M R   + +A       T K REPRG
Sbjct: 9   STTFLCVDTAPFRSSLLS-PSSLRLSPHRPANLRMVRAVTSATAASSDPTTTTKTREPRG 67

Query: 182 ITKPRPVTPEMQDIVGVPEIPRTQALKVIWAYIKQHNLQDPENKKIIICDEKLKKIFKGN 361
           I KPRPV+PEMQD+VGVPEIPRTQALK IWAYIK+H+LQDP+NK+ IICDEKLKKIF+G 
Sbjct: 68  IMKPRPVSPEMQDVVGVPEIPRTQALKRIWAYIKEHDLQDPQNKRDIICDEKLKKIFEGK 127

Query: 362 DRVGFLEVAGLISPHFL 412
           +RVGFLE+A LI PHFL
Sbjct: 128 ERVGFLEIAKLIGPHFL 144


>ref|XP_002272147.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
           vinifera]
          Length = 145

 Score =  153 bits (386), Expect = 4e-35
 Identities = 74/100 (74%), Positives = 83/100 (83%)
 Frame = +2

Query: 113 LTCATSATPKAVKETKKIREPRGITKPRPVTPEMQDIVGVPEIPRTQALKVIWAYIKQHN 292
           +T A ++ P A    K  REPRGI KPR ++PEMQD +GVPEIPRTQALK IWAYIKQHN
Sbjct: 47  VTSAAASKPPAAATGK--REPRGIMKPRRISPEMQDFLGVPEIPRTQALKQIWAYIKQHN 104

Query: 293 LQDPENKKIIICDEKLKKIFKGNDRVGFLEVAGLISPHFL 412
           LQDPENKKII+CDEKLK IF G DRVGFLE+AGLI+PHFL
Sbjct: 105 LQDPENKKIIVCDEKLKSIFAGKDRVGFLEIAGLINPHFL 144


>emb|CAN78429.1| hypothetical protein VITISV_011142 [Vitis vinifera]
          Length = 145

 Score =  153 bits (386), Expect = 4e-35
 Identities = 74/100 (74%), Positives = 83/100 (83%)
 Frame = +2

Query: 113 LTCATSATPKAVKETKKIREPRGITKPRPVTPEMQDIVGVPEIPRTQALKVIWAYIKQHN 292
           +T A ++ P A    K  REPRGI KPR ++PEMQD +GVPEIPRTQALK IWAYIKQHN
Sbjct: 47  VTSAAASKPPAAATGK--REPRGIMKPRRISPEMQDFLGVPEIPRTQALKQIWAYIKQHN 104

Query: 293 LQDPENKKIIICDEKLKKIFKGNDRVGFLEVAGLISPHFL 412
           LQDPENKKII+CDEKLK IF G DRVGFLE+AGLI+PHFL
Sbjct: 105 LQDPENKKIIVCDEKLKSIFAGKDRVGFLEIAGLINPHFL 144


>gb|AAK62445.1|AF387000_1 putative protein [Arabidopsis thaliana]
          Length = 144

 Score =  151 bits (382), Expect = 1e-34
 Identities = 77/137 (56%), Positives = 94/137 (68%)
 Frame = +2

Query: 2   TTLFAVTTPAAVKSSCFPVPKKAIFVLNNPCSANMHRLTCATSATPKAVKETKKIREPRG 181
           +T F     A ++SS    P       N+P +  M R   + +A       T K REPRG
Sbjct: 9   STTFLCVDTAPLRSSML-TPSSLRLSPNHPTNLRMVRAVTSAAAASSDPTTTTKTREPRG 67

Query: 182 ITKPRPVTPEMQDIVGVPEIPRTQALKVIWAYIKQHNLQDPENKKIIICDEKLKKIFKGN 361
           I KPRPV+  MQD+VGVPEIPRTQALK IWAYIK+H+LQDP+NK+ I+CDEKLKKIF+G 
Sbjct: 68  IMKPRPVSQAMQDVVGVPEIPRTQALKRIWAYIKEHDLQDPQNKRDILCDEKLKKIFEGK 127

Query: 362 DRVGFLEVAGLISPHFL 412
           +RVGFLE+A LI PHFL
Sbjct: 128 ERVGFLEIAKLIGPHFL 144


>ref|NP_195155.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
           gi|4455174|emb|CAB36706.1| putative protein [Arabidopsis
           thaliana] gi|7270379|emb|CAB80146.1| putative protein
           [Arabidopsis thaliana] gi|24899741|gb|AAN65085.1|
           putative protein [Arabidopsis thaliana]
           gi|332660955|gb|AEE86355.1| SWIB/MDM2 domain-containing
           protein [Arabidopsis thaliana]
          Length = 144

 Score =  151 bits (381), Expect = 2e-34
 Identities = 77/137 (56%), Positives = 94/137 (68%)
 Frame = +2

Query: 2   TTLFAVTTPAAVKSSCFPVPKKAIFVLNNPCSANMHRLTCATSATPKAVKETKKIREPRG 181
           +T F     A ++SS    P       N+P +  M R   + +A       T K REPRG
Sbjct: 9   STTFLCVDTAPLRSSMLS-PSSLRLSPNHPTNLRMVRAVTSAAAASSDPTTTTKTREPRG 67

Query: 182 ITKPRPVTPEMQDIVGVPEIPRTQALKVIWAYIKQHNLQDPENKKIIICDEKLKKIFKGN 361
           I KPRPV+  MQD+VGVPEIPRTQALK IWAYIK+H+LQDP+NK+ I+CDEKLKKIF+G 
Sbjct: 68  IMKPRPVSQAMQDVVGVPEIPRTQALKRIWAYIKEHDLQDPQNKRDILCDEKLKKIFEGK 127

Query: 362 DRVGFLEVAGLISPHFL 412
           +RVGFLE+A LI PHFL
Sbjct: 128 ERVGFLEIAKLIGPHFL 144


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