BLASTX nr result

ID: Cnidium21_contig00007906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007906
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27434.3| unnamed protein product [Vitis vinifera]               78   7e-13
ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
gb|AFK36982.1| unknown [Medicago truncatula]                           76   2e-12
ref|XP_003613588.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    76   2e-12
ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12

>emb|CBI27434.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 40/126 (31%), Positives = 66/126 (52%)
 Frame = +1

Query: 1   KTWRGIWVMHPHLVFDEEFFTQLVSKKEKKMRVSEVLKTISNILLLHTGPVLTFHLSIPK 180
           K WR  W+  PHLV D     +L+ +++     +E++  +  +LLLH GP++ F L + +
Sbjct: 73  KKWRYKWLTLPHLVIDNALGKKLLGRQQSAK--NELVSAVYQVLLLHKGPIVKFVLEVDE 130

Query: 181 YLPLHQCLDTGFWISNISNNGVRNLEIKNKQSVVYKMPSYIFSCVDLTCLNLEKCVLNPP 360
              L    D   WI+ +SN+ ++   +   ++  YK+PSY F+ + L  L L  C   PP
Sbjct: 131 ---LESYSDIDHWINFLSNHDIQEFTLSRAKTEHYKLPSYFFTFLHLRHLKLRGCAFRPP 187

Query: 361 LGFGGF 378
             F GF
Sbjct: 188 PRFKGF 193


>ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|222844192|gb|EEE81739.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 43/128 (33%), Positives = 68/128 (53%)
 Frame = +1

Query: 1   KTWRGIWVMHPHLVFDEEFFTQLVSKKEKKMRVSEVLKTISNILLLHTGPVLTFHLSIPK 180
           + WR  W   PH+VFD +  +  +S +++    ++++  I +ILLLH GP+  F LS   
Sbjct: 125 RKWRYKWSQIPHIVFDSQGIS--ISSQDQTTIKNKLVNIIDHILLLHNGPIYKFKLS--- 179

Query: 181 YLPLHQCLDTGFWISNISNNGVRNLEIKNKQSVVYKMPSYIFSCVDLTCLNLEKCVLNPP 360
           +  L    D   WI ++S    +   ++  +   YK+PS +FS  +L  L L  C+L PP
Sbjct: 180 HCDLLAVSDIDRWILHLSRGSTKEFVLEIWKGQQYKLPSCLFSFKNLVYLELFNCLLKPP 239

Query: 361 LGFGGFCN 384
           L F GF N
Sbjct: 240 LAFKGFRN 247


>gb|AFK36982.1| unknown [Medicago truncatula]
          Length = 418

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 47/127 (37%), Positives = 69/127 (54%), Gaps = 1/127 (0%)
 Frame = +1

Query: 1   KTWRGIWVMHPHLVFDEEFFTQLVSKKEKKMRVSEVLKTISNILLLHTGPVLTFHLSIPK 180
           + WR IW+  P L FD++FF  L   K+ K    EV   I+ +LLLH GP+  F L IP 
Sbjct: 45  RKWRDIWISFPWLEFDKDFF-DLYDLKDFKDHSPEVCIIITEVLLLHNGPINKFTLFIPS 103

Query: 181 YLPL-HQCLDTGFWISNISNNGVRNLEIKNKQSVVYKMPSYIFSCVDLTCLNLEKCVLNP 357
              +   C+    WI  +S  GV+ +++ + +SV Y++PS+ FS   LT + + K  L  
Sbjct: 104 GFNIPFGCIVK--WILFLSRKGVKFIQLASNESVPYRVPSHFFSFQKLTHVRICKFKLLV 161

Query: 358 PLGFGGF 378
           P  F GF
Sbjct: 162 PPNFCGF 168


>ref|XP_003613588.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355514923|gb|AES96546.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 499

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 47/127 (37%), Positives = 69/127 (54%), Gaps = 1/127 (0%)
 Frame = +1

Query: 1   KTWRGIWVMHPHLVFDEEFFTQLVSKKEKKMRVSEVLKTISNILLLHTGPVLTFHLSIPK 180
           + WR IW+  P L FD++FF  L   K+ K    EV   I+ +LLLH GP+  F L IP 
Sbjct: 126 RKWRDIWISFPWLEFDKDFF-DLYDLKDFKDHSPEVCIIITEVLLLHNGPINKFTLFIPS 184

Query: 181 YLPL-HQCLDTGFWISNISNNGVRNLEIKNKQSVVYKMPSYIFSCVDLTCLNLEKCVLNP 357
              +   C+    WI  +S  GV+ +++ + +SV Y++PS+ FS   LT + + K  L  
Sbjct: 185 GFNIPFGCIVK--WILFLSRKGVKFIQLASNESVPYRVPSHFFSFQKLTHVRICKFKLLV 242

Query: 358 PLGFGGF 378
           P  F GF
Sbjct: 243 PPNFCGF 249


>ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|222835217|gb|EEE73652.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 43/128 (33%), Positives = 68/128 (53%)
 Frame = +1

Query: 1   KTWRGIWVMHPHLVFDEEFFTQLVSKKEKKMRVSEVLKTISNILLLHTGPVLTFHLSIPK 180
           + WR  W   PHLVFD +  +  ++ +++ +  + ++  I N+LLLH GP+  F LS   
Sbjct: 36  RKWRYQWSQIPHLVFDTQCAS--ITSQDQTIAKNNLVNIIDNVLLLHNGPIYKFKLSHRD 93

Query: 181 YLPLHQCLDTGFWISNISNNGVRNLEIKNKQSVVYKMPSYIFSCVDLTCLNLEKCVLNPP 360
            L +    D   WI ++S    +   ++  +   YK+PS +FS  +LT L L  C+L PP
Sbjct: 94  LLGVS---DIDRWILHLSRGSTKEFVLEIWKGQRYKLPSCLFSFENLTHLELFNCLLKPP 150

Query: 361 LGFGGFCN 384
             F GF N
Sbjct: 151 PAFKGFRN 158


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