BLASTX nr result

ID: Cnidium21_contig00007879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007879
         (1128 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_179713.1| triosephosphate isomerase [Arabidopsis thaliana...   334   e-112
ref|XP_002880361.1| hypothetical protein ARALYDRAFT_900526 [Arab...   332   e-112
ref|XP_002274871.1| PREDICTED: triosephosphate isomerase, chloro...   333   e-111
emb|CBI37923.3| unnamed protein product [Vitis vinifera]              333   e-111
gb|ADG27841.1| triosephosphate isomerase [Gossypium hirsutum]         328   e-111

>ref|NP_179713.1| triosephosphate isomerase [Arabidopsis thaliana]
           gi|13431953|sp|Q9SKP6.1|TPIC_ARATH RecName:
           Full=Triosephosphate isomerase, chloroplastic;
           Short=TIM; Short=Triose-phosphate isomerase; Flags:
           Precursor gi|7839391|gb|AAF70259.1|AF247559_1
           triosephosphate isomerase [Arabidopsis thaliana]
           gi|14190441|gb|AAK55701.1|AF378898_1 At2g21170/F26H11.7
           [Arabidopsis thaliana] gi|4803926|gb|AAD29799.1|
           putative triosephosphate isomerase [Arabidopsis
           thaliana] gi|15450569|gb|AAK96462.1| At2g21170/F26H11.7
           [Arabidopsis thaliana] gi|21593477|gb|AAM65444.1|
           putative triosephosphate isomerase [Arabidopsis
           thaliana] gi|330252037|gb|AEC07131.1| triosephosphate
           isomerase [Arabidopsis thaliana]
          Length = 315

 Score =  334 bits (856), Expect(2) = e-112
 Identities = 156/178 (87%), Positives = 172/178 (96%)
 Frame = +2

Query: 353 GKFFVGGNWKCNGTKDSISKLVSDLNNSTLEADVDVVVSPPFVYIDQVKNSLTDKIDIAA 532
           GKFFVGGNWKCNGTKDSI+KL+SDLN++TLEADVDVVVSPPFVYIDQVK+SLTD+IDI+ 
Sbjct: 64  GKFFVGGNWKCNGTKDSIAKLISDLNSATLEADVDVVVSPPFVYIDQVKSSLTDRIDISG 123

Query: 533 QNSWIGKGGAFTGEISIEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSQDVGV 712
           QNSW+GKGGAFTGEIS+EQLKD+GCKWVILGHSERRHVIGE D+FIGKKAAYALS+ +GV
Sbjct: 124 QNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSERRHVIGEKDEFIGKKAAYALSEGLGV 183

Query: 713 IACIGELLQEREEGKTFDVCFRQMKAFADAVPSWDNVVVAYEPVWAIGTGKVASPQQA 886
           IACIGE L+ERE GKTFDVCF Q+KAFADAVPSWDN+VVAYEPVWAIGTGKVASPQQA
Sbjct: 184 IACIGEKLEEREAGKTFDVCFAQLKAFADAVPSWDNIVVAYEPVWAIGTGKVASPQQA 241



 Score = 99.8 bits (247), Expect(2) = e-112
 Identities = 49/51 (96%), Positives = 50/51 (98%)
 Frame = +1

Query: 976  KTRIIYGGSVNGGNCAELAKEEDIDGFLVGGASLKGPEFATIINSVTSKKV 1128
            KTRIIYGGSVNGGN AELAKEEDIDGFLVGGASLKGPEFATI+NSVTSKKV
Sbjct: 263  KTRIIYGGSVNGGNSAELAKEEDIDGFLVGGASLKGPEFATIVNSVTSKKV 313


>ref|XP_002880361.1| hypothetical protein ARALYDRAFT_900526 [Arabidopsis lyrata subsp.
           lyrata] gi|297326200|gb|EFH56620.1| hypothetical protein
           ARALYDRAFT_900526 [Arabidopsis lyrata subsp. lyrata]
          Length = 314

 Score =  332 bits (850), Expect(2) = e-112
 Identities = 155/178 (87%), Positives = 171/178 (96%)
 Frame = +2

Query: 353 GKFFVGGNWKCNGTKDSISKLVSDLNNSTLEADVDVVVSPPFVYIDQVKNSLTDKIDIAA 532
           GKFFVGGNWKCNGTKDSI+KLVSDLN++TLEADVDVVVSPPFVYIDQVK+SLTD+IDI+ 
Sbjct: 63  GKFFVGGNWKCNGTKDSIAKLVSDLNSATLEADVDVVVSPPFVYIDQVKSSLTDRIDISG 122

Query: 533 QNSWIGKGGAFTGEISIEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSQDVGV 712
           QNSW+GKGGAFTGEIS+EQLKD+GCKWVILGHSERRHVIGE D+FIGKKAAYALS+ +GV
Sbjct: 123 QNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSERRHVIGEKDEFIGKKAAYALSEGLGV 182

Query: 713 IACIGELLQEREEGKTFDVCFRQMKAFADAVPSWDNVVVAYEPVWAIGTGKVASPQQA 886
           IACIGE L+ERE G+TFDVCF Q+KAF DAVPSWDN+VVAYEPVWAIGTGKVASPQQA
Sbjct: 183 IACIGEKLEEREAGRTFDVCFAQLKAFGDAVPSWDNIVVAYEPVWAIGTGKVASPQQA 240



 Score = 99.8 bits (247), Expect(2) = e-112
 Identities = 49/51 (96%), Positives = 50/51 (98%)
 Frame = +1

Query: 976  KTRIIYGGSVNGGNCAELAKEEDIDGFLVGGASLKGPEFATIINSVTSKKV 1128
            KTRIIYGGSVNGGN AELAKEEDIDGFLVGGASLKGPEFATI+NSVTSKKV
Sbjct: 262  KTRIIYGGSVNGGNSAELAKEEDIDGFLVGGASLKGPEFATIVNSVTSKKV 312


>ref|XP_002274871.1| PREDICTED: triosephosphate isomerase, chloroplastic-like isoform 1
           [Vitis vinifera]
          Length = 324

 Score =  333 bits (855), Expect(2) = e-111
 Identities = 158/178 (88%), Positives = 172/178 (96%)
 Frame = +2

Query: 353 GKFFVGGNWKCNGTKDSISKLVSDLNNSTLEADVDVVVSPPFVYIDQVKNSLTDKIDIAA 532
           GKFFVGGNWKCNGTKDSISKLVSDLN++ LEADVDVVV+PPFVY+DQVKNSLTD+I+I+A
Sbjct: 73  GKFFVGGNWKCNGTKDSISKLVSDLNSAKLEADVDVVVAPPFVYLDQVKNSLTDRIEISA 132

Query: 533 QNSWIGKGGAFTGEISIEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSQDVGV 712
           QNSW+GKGGAFTGEIS+EQLKDIGC WVILGHSERRHVIGEDDQFIGKKAAYALSQ + V
Sbjct: 133 QNSWVGKGGAFTGEISVEQLKDIGCNWVILGHSERRHVIGEDDQFIGKKAAYALSQGLKV 192

Query: 713 IACIGELLQEREEGKTFDVCFRQMKAFADAVPSWDNVVVAYEPVWAIGTGKVASPQQA 886
           IACIGELLQERE GKTFDVCF+QMKAFADAVPSWD+VV+AYEPVWAIGTGKVA+P QA
Sbjct: 193 IACIGELLQEREAGKTFDVCFQQMKAFADAVPSWDDVVIAYEPVWAIGTGKVATPLQA 250



 Score = 97.1 bits (240), Expect(2) = e-111
 Identities = 46/51 (90%), Positives = 49/51 (96%)
 Frame = +1

Query: 976  KTRIIYGGSVNGGNCAELAKEEDIDGFLVGGASLKGPEFATIINSVTSKKV 1128
            KTRIIYGGSVNG NC+ELAK+EDIDGFLVGGASLKGPEFA I+NSVTSKKV
Sbjct: 272  KTRIIYGGSVNGSNCSELAKQEDIDGFLVGGASLKGPEFAVIVNSVTSKKV 322


>emb|CBI37923.3| unnamed protein product [Vitis vinifera]
          Length = 256

 Score =  333 bits (855), Expect(2) = e-111
 Identities = 158/178 (88%), Positives = 172/178 (96%)
 Frame = +2

Query: 353 GKFFVGGNWKCNGTKDSISKLVSDLNNSTLEADVDVVVSPPFVYIDQVKNSLTDKIDIAA 532
           GKFFVGGNWKCNGTKDSISKLVSDLN++ LEADVDVVV+PPFVY+DQVKNSLTD+I+I+A
Sbjct: 5   GKFFVGGNWKCNGTKDSISKLVSDLNSAKLEADVDVVVAPPFVYLDQVKNSLTDRIEISA 64

Query: 533 QNSWIGKGGAFTGEISIEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSQDVGV 712
           QNSW+GKGGAFTGEIS+EQLKDIGC WVILGHSERRHVIGEDDQFIGKKAAYALSQ + V
Sbjct: 65  QNSWVGKGGAFTGEISVEQLKDIGCNWVILGHSERRHVIGEDDQFIGKKAAYALSQGLKV 124

Query: 713 IACIGELLQEREEGKTFDVCFRQMKAFADAVPSWDNVVVAYEPVWAIGTGKVASPQQA 886
           IACIGELLQERE GKTFDVCF+QMKAFADAVPSWD+VV+AYEPVWAIGTGKVA+P QA
Sbjct: 125 IACIGELLQEREAGKTFDVCFQQMKAFADAVPSWDDVVIAYEPVWAIGTGKVATPLQA 182



 Score = 97.1 bits (240), Expect(2) = e-111
 Identities = 46/51 (90%), Positives = 49/51 (96%)
 Frame = +1

Query: 976  KTRIIYGGSVNGGNCAELAKEEDIDGFLVGGASLKGPEFATIINSVTSKKV 1128
            KTRIIYGGSVNG NC+ELAK+EDIDGFLVGGASLKGPEFA I+NSVTSKKV
Sbjct: 204  KTRIIYGGSVNGSNCSELAKQEDIDGFLVGGASLKGPEFAVIVNSVTSKKV 254


>gb|ADG27841.1| triosephosphate isomerase [Gossypium hirsutum]
          Length = 307

 Score =  328 bits (842), Expect(2) = e-111
 Identities = 152/178 (85%), Positives = 170/178 (95%)
 Frame = +2

Query: 353 GKFFVGGNWKCNGTKDSISKLVSDLNNSTLEADVDVVVSPPFVYIDQVKNSLTDKIDIAA 532
           GKFFVGGNWKCNGTKDSI+KLVSDLN++ LE DVDVVVSPPFVY+DQV  SLT +I+++A
Sbjct: 56  GKFFVGGNWKCNGTKDSITKLVSDLNSAKLETDVDVVVSPPFVYLDQVTASLTSRIEVSA 115

Query: 533 QNSWIGKGGAFTGEISIEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSQDVGV 712
           QNSWIGKGGAFTGEIS+EQLKDIGCKWVILGHSERRH+IGEDDQFIGKKAAYAL++ +GV
Sbjct: 116 QNSWIGKGGAFTGEISVEQLKDIGCKWVILGHSERRHIIGEDDQFIGKKAAYALNEGLGV 175

Query: 713 IACIGELLQEREEGKTFDVCFRQMKAFADAVPSWDNVVVAYEPVWAIGTGKVASPQQA 886
           IACIGELL+ERE GKTFDVCFRQ+KAFAD VPSWDN+V+AYEPVWAIGTGKVA+PQQA
Sbjct: 176 IACIGELLEEREAGKTFDVCFRQLKAFADVVPSWDNIVIAYEPVWAIGTGKVATPQQA 233



 Score =  100 bits (248), Expect(2) = e-111
 Identities = 48/51 (94%), Positives = 50/51 (98%)
 Frame = +1

Query: 976  KTRIIYGGSVNGGNCAELAKEEDIDGFLVGGASLKGPEFATIINSVTSKKV 1128
            KTRIIYGGSVNG NCAELAK+EDIDGFLVGGASLKGPEFATI+NSVTSKKV
Sbjct: 255  KTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNSVTSKKV 305


Top