BLASTX nr result
ID: Cnidium21_contig00007873
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00007873 (862 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002275902.2| PREDICTED: ABC transporter B family member 2... 92 6e-23 ref|XP_004139927.1| PREDICTED: ABC transporter B family member 2... 86 1e-21 gb|ABK96695.1| unknown [Populus trichocarpa x Populus deltoides] 86 3e-21 ref|XP_002532928.1| Transporter ATM1, mitochondrial precursor, p... 87 6e-21 ref|XP_002319987.1| ABC transporter family of the mitochondria f... 84 1e-20 >ref|XP_002275902.2| PREDICTED: ABC transporter B family member 25, mitochondrial-like [Vitis vinifera] gi|297745734|emb|CBI15790.3| unnamed protein product [Vitis vinifera] Length = 726 Score = 91.7 bits (226), Expect(2) = 6e-23 Identities = 47/76 (61%), Positives = 58/76 (76%), Gaps = 6/76 (7%) Frame = +2 Query: 5 NSSFTIKVVQA------DKVLNVQVPFLFKLAVDWLTTTSGNATSLAAFTTVNSTSVAVF 166 N F +V+ A KVLNVQVPFLFKLAVDWLTTT+GNAT+LA+FTT NST++A+F Sbjct: 133 NPEFRFRVIMALGFLVGAKVLNVQVPFLFKLAVDWLTTTTGNATALASFTTANSTALALF 192 Query: 167 AAPAAILMG*RIAHGG 214 +PAA+L+G IA G Sbjct: 193 VSPAAVLVGYGIARSG 208 Score = 42.4 bits (98), Expect(2) = 6e-23 Identities = 24/35 (68%), Positives = 28/35 (80%) Frame = +3 Query: 204 RMGASAFNVTFL*KLRIAVFSKVSLRTIRSVSRKL 308 R GASAFN +LR AVFSKV+LRTIRSVSR++ Sbjct: 206 RSGASAFN-----ELRTAVFSKVALRTIRSVSRRV 235 >ref|XP_004139927.1| PREDICTED: ABC transporter B family member 25, mitochondrial-like [Cucumis sativus] Length = 762 Score = 86.3 bits (212), Expect(2) = 1e-21 Identities = 44/76 (57%), Positives = 54/76 (71%), Gaps = 6/76 (7%) Frame = +2 Query: 5 NSSFTIKVVQA------DKVLNVQVPFLFKLAVDWLTTTSGNATSLAAFTTVNSTSVAVF 166 NS F +V+ A K+LNVQVPFLFKLAVDWLTT SGNA +LA+FT NST + +F Sbjct: 168 NSEFRFRVIMALGFLVGAKILNVQVPFLFKLAVDWLTTASGNAAALASFTAANSTMLTLF 227 Query: 167 AAPAAILMG*RIAHGG 214 + PAA+L+G IA G Sbjct: 228 STPAAVLVGYGIARSG 243 Score = 43.5 bits (101), Expect(2) = 1e-21 Identities = 25/35 (71%), Positives = 28/35 (80%) Frame = +3 Query: 204 RMGASAFNVTFL*KLRIAVFSKVSLRTIRSVSRKL 308 R GASAFN +LR AVFSKV+LRTIRSVSRK+ Sbjct: 241 RSGASAFN-----ELRTAVFSKVALRTIRSVSRKV 270 >gb|ABK96695.1| unknown [Populus trichocarpa x Populus deltoides] Length = 533 Score = 86.3 bits (212), Expect(2) = 3e-21 Identities = 46/76 (60%), Positives = 56/76 (73%), Gaps = 6/76 (7%) Frame = +2 Query: 5 NSSFTIKVVQA------DKVLNVQVPFLFKLAVDWLTTTSGNATSLAAFTTVNSTSVAVF 166 N F ++VV A KVLNVQVPFLFKLAVDWLTT +GNA +LA+FTT NST +A+F Sbjct: 167 NPEFRLRVVLALGFLVGAKVLNVQVPFLFKLAVDWLTTATGNAAALASFTTANSTLLALF 226 Query: 167 AAPAAILMG*RIAHGG 214 A PA++L+G IA G Sbjct: 227 ATPASVLIGYGIARTG 242 Score = 42.4 bits (98), Expect(2) = 3e-21 Identities = 24/35 (68%), Positives = 28/35 (80%) Frame = +3 Query: 204 RMGASAFNVTFL*KLRIAVFSKVSLRTIRSVSRKL 308 R G+SAFN +LR AVFSKV+LRTIRSVSRK+ Sbjct: 240 RTGSSAFN-----ELRTAVFSKVALRTIRSVSRKV 269 >ref|XP_002532928.1| Transporter ATM1, mitochondrial precursor, putative [Ricinus communis] gi|223527304|gb|EEF29455.1| Transporter ATM1, mitochondrial precursor, putative [Ricinus communis] Length = 720 Score = 87.4 bits (215), Expect(2) = 6e-21 Identities = 46/76 (60%), Positives = 57/76 (75%), Gaps = 6/76 (7%) Frame = +2 Query: 5 NSSFTIKVVQA------DKVLNVQVPFLFKLAVDWLTTTSGNATSLAAFTTVNSTSVAVF 166 N F ++V+ A KVLNVQVPFLFKLAVDWLTT SGNAT+LA+FT+ NST +A+F Sbjct: 127 NLEFRLRVITALAFLVGAKVLNVQVPFLFKLAVDWLTTASGNATALASFTSANSTLLALF 186 Query: 167 AAPAAILMG*RIAHGG 214 A PA++L+G IA G Sbjct: 187 ATPASVLIGYGIARTG 202 Score = 40.0 bits (92), Expect(2) = 6e-21 Identities = 23/35 (65%), Positives = 26/35 (74%) Frame = +3 Query: 204 RMGASAFNVTFL*KLRIAVFSKVSLRTIRSVSRKL 308 R GASAFN +LR AVFS V+LRTIR VSRK+ Sbjct: 200 RTGASAFN-----ELRTAVFSNVALRTIRQVSRKV 229 >ref|XP_002319987.1| ABC transporter family of the mitochondria family [Populus trichocarpa] gi|222858363|gb|EEE95910.1| ABC transporter family of the mitochondria family [Populus trichocarpa] Length = 762 Score = 84.0 bits (206), Expect(2) = 1e-20 Identities = 45/76 (59%), Positives = 55/76 (72%), Gaps = 6/76 (7%) Frame = +2 Query: 5 NSSFTIKVVQA------DKVLNVQVPFLFKLAVDWLTTTSGNATSLAAFTTVNSTSVAVF 166 N F ++VV A KVLNVQVPFLFKLAVDWLTT + NA +LA+FTT NST +A+F Sbjct: 169 NPEFRLRVVLALGFLVGAKVLNVQVPFLFKLAVDWLTTATSNAAALASFTTANSTLLALF 228 Query: 167 AAPAAILMG*RIAHGG 214 A PA++L+G IA G Sbjct: 229 ATPASVLIGYGIARTG 244 Score = 42.4 bits (98), Expect(2) = 1e-20 Identities = 24/35 (68%), Positives = 28/35 (80%) Frame = +3 Query: 204 RMGASAFNVTFL*KLRIAVFSKVSLRTIRSVSRKL 308 R G+SAFN +LR AVFSKV+LRTIRSVSRK+ Sbjct: 242 RTGSSAFN-----ELRTAVFSKVALRTIRSVSRKV 271