BLASTX nr result

ID: Cnidium21_contig00007873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007873
         (862 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275902.2| PREDICTED: ABC transporter B family member 2...    92   6e-23
ref|XP_004139927.1| PREDICTED: ABC transporter B family member 2...    86   1e-21
gb|ABK96695.1| unknown [Populus trichocarpa x Populus deltoides]       86   3e-21
ref|XP_002532928.1| Transporter ATM1, mitochondrial precursor, p...    87   6e-21
ref|XP_002319987.1| ABC transporter family of the mitochondria f...    84   1e-20

>ref|XP_002275902.2| PREDICTED: ABC transporter B family member 25, mitochondrial-like
           [Vitis vinifera] gi|297745734|emb|CBI15790.3| unnamed
           protein product [Vitis vinifera]
          Length = 726

 Score = 91.7 bits (226), Expect(2) = 6e-23
 Identities = 47/76 (61%), Positives = 58/76 (76%), Gaps = 6/76 (7%)
 Frame = +2

Query: 5   NSSFTIKVVQA------DKVLNVQVPFLFKLAVDWLTTTSGNATSLAAFTTVNSTSVAVF 166
           N  F  +V+ A       KVLNVQVPFLFKLAVDWLTTT+GNAT+LA+FTT NST++A+F
Sbjct: 133 NPEFRFRVIMALGFLVGAKVLNVQVPFLFKLAVDWLTTTTGNATALASFTTANSTALALF 192

Query: 167 AAPAAILMG*RIAHGG 214
            +PAA+L+G  IA  G
Sbjct: 193 VSPAAVLVGYGIARSG 208



 Score = 42.4 bits (98), Expect(2) = 6e-23
 Identities = 24/35 (68%), Positives = 28/35 (80%)
 Frame = +3

Query: 204 RMGASAFNVTFL*KLRIAVFSKVSLRTIRSVSRKL 308
           R GASAFN     +LR AVFSKV+LRTIRSVSR++
Sbjct: 206 RSGASAFN-----ELRTAVFSKVALRTIRSVSRRV 235


>ref|XP_004139927.1| PREDICTED: ABC transporter B family member 25, mitochondrial-like
           [Cucumis sativus]
          Length = 762

 Score = 86.3 bits (212), Expect(2) = 1e-21
 Identities = 44/76 (57%), Positives = 54/76 (71%), Gaps = 6/76 (7%)
 Frame = +2

Query: 5   NSSFTIKVVQA------DKVLNVQVPFLFKLAVDWLTTTSGNATSLAAFTTVNSTSVAVF 166
           NS F  +V+ A       K+LNVQVPFLFKLAVDWLTT SGNA +LA+FT  NST + +F
Sbjct: 168 NSEFRFRVIMALGFLVGAKILNVQVPFLFKLAVDWLTTASGNAAALASFTAANSTMLTLF 227

Query: 167 AAPAAILMG*RIAHGG 214
           + PAA+L+G  IA  G
Sbjct: 228 STPAAVLVGYGIARSG 243



 Score = 43.5 bits (101), Expect(2) = 1e-21
 Identities = 25/35 (71%), Positives = 28/35 (80%)
 Frame = +3

Query: 204 RMGASAFNVTFL*KLRIAVFSKVSLRTIRSVSRKL 308
           R GASAFN     +LR AVFSKV+LRTIRSVSRK+
Sbjct: 241 RSGASAFN-----ELRTAVFSKVALRTIRSVSRKV 270


>gb|ABK96695.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 533

 Score = 86.3 bits (212), Expect(2) = 3e-21
 Identities = 46/76 (60%), Positives = 56/76 (73%), Gaps = 6/76 (7%)
 Frame = +2

Query: 5   NSSFTIKVVQA------DKVLNVQVPFLFKLAVDWLTTTSGNATSLAAFTTVNSTSVAVF 166
           N  F ++VV A       KVLNVQVPFLFKLAVDWLTT +GNA +LA+FTT NST +A+F
Sbjct: 167 NPEFRLRVVLALGFLVGAKVLNVQVPFLFKLAVDWLTTATGNAAALASFTTANSTLLALF 226

Query: 167 AAPAAILMG*RIAHGG 214
           A PA++L+G  IA  G
Sbjct: 227 ATPASVLIGYGIARTG 242



 Score = 42.4 bits (98), Expect(2) = 3e-21
 Identities = 24/35 (68%), Positives = 28/35 (80%)
 Frame = +3

Query: 204 RMGASAFNVTFL*KLRIAVFSKVSLRTIRSVSRKL 308
           R G+SAFN     +LR AVFSKV+LRTIRSVSRK+
Sbjct: 240 RTGSSAFN-----ELRTAVFSKVALRTIRSVSRKV 269


>ref|XP_002532928.1| Transporter ATM1, mitochondrial precursor, putative [Ricinus
           communis] gi|223527304|gb|EEF29455.1| Transporter ATM1,
           mitochondrial precursor, putative [Ricinus communis]
          Length = 720

 Score = 87.4 bits (215), Expect(2) = 6e-21
 Identities = 46/76 (60%), Positives = 57/76 (75%), Gaps = 6/76 (7%)
 Frame = +2

Query: 5   NSSFTIKVVQA------DKVLNVQVPFLFKLAVDWLTTTSGNATSLAAFTTVNSTSVAVF 166
           N  F ++V+ A       KVLNVQVPFLFKLAVDWLTT SGNAT+LA+FT+ NST +A+F
Sbjct: 127 NLEFRLRVITALAFLVGAKVLNVQVPFLFKLAVDWLTTASGNATALASFTSANSTLLALF 186

Query: 167 AAPAAILMG*RIAHGG 214
           A PA++L+G  IA  G
Sbjct: 187 ATPASVLIGYGIARTG 202



 Score = 40.0 bits (92), Expect(2) = 6e-21
 Identities = 23/35 (65%), Positives = 26/35 (74%)
 Frame = +3

Query: 204 RMGASAFNVTFL*KLRIAVFSKVSLRTIRSVSRKL 308
           R GASAFN     +LR AVFS V+LRTIR VSRK+
Sbjct: 200 RTGASAFN-----ELRTAVFSNVALRTIRQVSRKV 229


>ref|XP_002319987.1| ABC transporter family of the mitochondria family [Populus
           trichocarpa] gi|222858363|gb|EEE95910.1| ABC transporter
           family of the mitochondria family [Populus trichocarpa]
          Length = 762

 Score = 84.0 bits (206), Expect(2) = 1e-20
 Identities = 45/76 (59%), Positives = 55/76 (72%), Gaps = 6/76 (7%)
 Frame = +2

Query: 5   NSSFTIKVVQA------DKVLNVQVPFLFKLAVDWLTTTSGNATSLAAFTTVNSTSVAVF 166
           N  F ++VV A       KVLNVQVPFLFKLAVDWLTT + NA +LA+FTT NST +A+F
Sbjct: 169 NPEFRLRVVLALGFLVGAKVLNVQVPFLFKLAVDWLTTATSNAAALASFTTANSTLLALF 228

Query: 167 AAPAAILMG*RIAHGG 214
           A PA++L+G  IA  G
Sbjct: 229 ATPASVLIGYGIARTG 244



 Score = 42.4 bits (98), Expect(2) = 1e-20
 Identities = 24/35 (68%), Positives = 28/35 (80%)
 Frame = +3

Query: 204 RMGASAFNVTFL*KLRIAVFSKVSLRTIRSVSRKL 308
           R G+SAFN     +LR AVFSKV+LRTIRSVSRK+
Sbjct: 242 RTGSSAFN-----ELRTAVFSKVALRTIRSVSRKV 271


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