BLASTX nr result
ID: Cnidium21_contig00007871
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00007871
(1687 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002529478.1| protein with unknown function [Ricinus commu... 500 e-139
ref|XP_002327990.1| predicted protein [Populus trichocarpa] gi|2... 488 e-135
ref|XP_002271000.1| PREDICTED: F-box protein SKIP16-like [Vitis ... 485 e-134
ref|XP_003606823.1| F-box protein SKIP16 [Medicago truncatula] g... 477 e-132
ref|XP_002271295.2| PREDICTED: F-box protein SKIP16-like [Vitis ... 473 e-131
>ref|XP_002529478.1| protein with unknown function [Ricinus communis]
gi|223531036|gb|EEF32888.1| protein with unknown function
[Ricinus communis]
Length = 446
Score = 500 bits (1288), Expect = e-139
Identities = 259/456 (56%), Positives = 325/456 (71%), Gaps = 3/456 (0%)
Frame = +3
Query: 105 MSIENVGGLAIYKILSKLGPRDTARVGCVSHRFVEWAFDEFLWYQFCIQELQLSSPEDPL 284
M +E VG LA+ +ILS LGP +TA V CVS R A +E LW +FC Q+L LSSP DP
Sbjct: 1 MGLEAVGDLALNEILSILGPEETAIVACVSKRLKASASEESLWSKFCFQDLHLSSPLDPH 60
Query: 285 GNPTPSFKVAYQSWRESFGMYPWSLVLRVRRCWRRIKSWLVVNFPEAMTTLRKGATEDEL 464
GNP PSFK AY SWRE+F MYPW LV RV+RCW R+K+WL NFPEA TL++GATEDE+
Sbjct: 61 GNPLPSFKFAYGSWREAFAMYPWPLVKRVKRCWDRLKNWLTTNFPEAAATLQQGATEDEI 120
Query: 465 NNLEKSLEVKLPLATRLLYRFCDGQ--DQVEYSESFSESLLGLIGGYSFCGHLVNVYLLP 638
EK LEVKLPL TR+LYRF +GQ + + S + LGLIGGY+F HLVNVYLLP
Sbjct: 121 RRFEKVLEVKLPLPTRVLYRFYNGQVFQEKDALTSAHGNNLGLIGGYAFYHHLVNVYLLP 180
Query: 639 LDEVISVTNDVRRQLFEDVRLVF-GTEYLVVAASSTEGEKFFFLSCRNGELSAGTGNLLE 815
LD+VI T + L + F T+Y+VVAASS EKFFFL+C NG+L GT NL
Sbjct: 181 LDQVILETKQIVCHL--GISGGFNSTKYIVVAASSAFIEKFFFLNCTNGQLYVGTRNLPI 238
Query: 816 NGEMSPCVPDDLIRSIHDVRDCQQQDGLLLWLEEHGRHLESGLVKVSEEMSEEMITRYIS 995
+GEM PCVP+ L+RS+HD QQ+DG+LLWLEEHGR L+ G++K+ EE + R I
Sbjct: 239 DGEMMPCVPNALLRSVHDPSSDQQRDGMLLWLEEHGRRLQDGIIKLREERN----IRTIC 294
Query: 996 LFPENSSLCSAAVTNGVQVRASALFIPELSETNLESNHYRFAYSIRMSLKPEGCIVNGMR 1175
FPE CS A+TNGV+VRASA+F+PE ++ + S+ Y FAYSIRMSL P+GCIVNGM
Sbjct: 295 QFPEEPPSCSTAITNGVKVRASAIFVPEAADLDGGSDKYWFAYSIRMSLLPDGCIVNGMY 354
Query: 1176 FDSCQLYQAHWTVRENDNIVSEIIEENVVGKNPLLHSGEKEFVYQGCVPIRTPQGSIKGS 1355
F SCQL + HW +R N+ +VS+++ E V+GK P+L GE+EFVY+ C+P+ T GS++GS
Sbjct: 355 FASCQLQKRHWIIRANETVVSDVVGEGVIGKYPVLCPGEQEFVYESCMPLPTSPGSVEGS 414
Query: 1356 YTFVPGRLTDPKGAEFEVEVPQIFLKSFFEDPNYIF 1463
+TFVP RLT PKGA FEVEV + L+ P+YIF
Sbjct: 415 FTFVPDRLTHPKGAPFEVEVARFHLQL----PDYIF 446
>ref|XP_002327990.1| predicted protein [Populus trichocarpa] gi|222837399|gb|EEE75778.1|
predicted protein [Populus trichocarpa]
Length = 442
Score = 488 bits (1257), Expect = e-135
Identities = 253/453 (55%), Positives = 315/453 (69%), Gaps = 2/453 (0%)
Frame = +3
Query: 111 IENVGGLAIYKILSKLGPRDTARVGCVSHRFVEWAFDEFLWYQFCIQELQLSSPEDPLGN 290
I +G LA+ IL+KLGP++TA+V CVS RF + A +E LW FC+Q+L LS+P D GN
Sbjct: 5 INKLGDLALNIILTKLGPKETAKVSCVSKRFKDLASEESLWSLFCLQDLDLSAPLDHHGN 64
Query: 291 PTPSFKVAYQSWRESFGMYPWSLVLRVRRCWRRIKSWLVVNFPEAMTTLRKGATEDELNN 470
P SFK Y+ WRE+F MYPWSLV RV+ CW R+KSWL NFPE TL +GA+E E+
Sbjct: 65 PLRSFKATYKLWREAFCMYPWSLVKRVKSCWDRLKSWLTTNFPEVKATLGRGASEGEIQE 124
Query: 471 LEKSLEVKLPLATRLLYRFCDGQDQV--EYSESFSESLLGLIGGYSFCGHLVNVYLLPLD 644
LE+ L+VKLPL TRLLYRF DGQ+ + + LLGLIGGY F HLVNVYLLPL
Sbjct: 125 LERILKVKLPLPTRLLYRFHDGQNLTGENLNTDAAACLLGLIGGYCFYDHLVNVYLLPLH 184
Query: 645 EVISVTNDVRRQLFEDVRLVFGTEYLVVAASSTEGEKFFFLSCRNGELSAGTGNLLENGE 824
EVI T ++ R L L G++++VVAASS+ KFFFL+C +G+L GT NLL GE
Sbjct: 185 EVILETREIVRHL----DLPNGSQFIVVAASSSNIGKFFFLNCSDGQLYVGTQNLLTIGE 240
Query: 825 MSPCVPDDLIRSIHDVRDCQQQDGLLLWLEEHGRHLESGLVKVSEEMSEEMITRYISLFP 1004
M PCVP LI +HD QQQD +LLWLEEHG L +G++K+ +E + + ISLFP
Sbjct: 241 MIPCVPQTLISPVHDFNIDQQQDAMLLWLEEHGHRLHNGMIKLRDEGN----IKSISLFP 296
Query: 1005 ENSSLCSAAVTNGVQVRASALFIPELSETNLESNHYRFAYSIRMSLKPEGCIVNGMRFDS 1184
E S LCS AVTNGV+VRASA+F+PE + S Y FAYSIRMSL PEGCI+NGMRF S
Sbjct: 297 EESPLCSTAVTNGVKVRASAIFVPEAVDL---SRKYLFAYSIRMSLPPEGCIINGMRFSS 353
Query: 1185 CQLYQAHWTVRENDNIVSEIIEENVVGKNPLLHSGEKEFVYQGCVPIRTPQGSIKGSYTF 1364
CQL+ HW + +D + S + E V+GK PLL GEKEFVY+ C P+R+P GS++GS+TF
Sbjct: 354 CQLHLRHWVISADDTVASNVNAEAVIGKFPLLLPGEKEFVYESCTPLRSPTGSVEGSFTF 413
Query: 1365 VPGRLTDPKGAEFEVEVPQIFLKSFFEDPNYIF 1463
VPGRL DPKG FE EV + L+ P+YIF
Sbjct: 414 VPGRLIDPKGMPFEAEVARFPLQL----PDYIF 442
>ref|XP_002271000.1| PREDICTED: F-box protein SKIP16-like [Vitis vinifera]
Length = 444
Score = 485 bits (1249), Expect = e-134
Identities = 256/455 (56%), Positives = 315/455 (69%), Gaps = 1/455 (0%)
Frame = +3
Query: 102 EMSIENVGGLAIYKILSKLGPRDTARVGCVSHRFVEWAFDEFLWYQFCIQELQLSSPEDP 281
EM +E++G LAI I+SKL +DT V CVS + A +E LW C Q+L LS+P DP
Sbjct: 2 EMGLEDLGDLAINAIISKLDTKDTVAVSCVSKKLRVSASEESLWLNHCSQDLGLSAPIDP 61
Query: 282 LGNPTPSFKVAYQSWRESFGMYPWSLVLRVRRCWRRIKSWLVVNFPEAMTTLRKGATEDE 461
LG P PSFK Y+ WRESFGMYPW LV RV+RCW R+K+WL NFPEA TLRKGATE E
Sbjct: 62 LGKPAPSFKETYRLWRESFGMYPWPLVKRVKRCWDRLKNWLSANFPEADATLRKGATEVE 121
Query: 462 LNNLEKSLEVKLPLATRLLYRFCDGQDQVE-YSESFSESLLGLIGGYSFCGHLVNVYLLP 638
+ LE L+VKLPL TRLLYRFCDGQ+ + + S LG+IGGY F HLVNV LLP
Sbjct: 122 IEALENILKVKLPLPTRLLYRFCDGQELTDDVGGTALGSSLGIIGGYCFYDHLVNVCLLP 181
Query: 639 LDEVISVTNDVRRQLFEDVRLVFGTEYLVVAASSTEGEKFFFLSCRNGELSAGTGNLLEN 818
L +VI T ++ QL ++Y++VAASST KFFFL+C G+L GT +L+
Sbjct: 182 LRQVILETKEITDQLGFSTT----SKYVIVAASSTYIGKFFFLNCTTGQLYVGTRSLVSA 237
Query: 819 GEMSPCVPDDLIRSIHDVRDCQQQDGLLLWLEEHGRHLESGLVKVSEEMSEEMITRYISL 998
GEM PCVP+ LI +HD QQQD +LLWLEEH R L++G++K + E + R I+L
Sbjct: 238 GEMIPCVPNALISPMHDSNTGQQQDAMLLWLEEHVRRLQNGIIK----LRNEGMIRSINL 293
Query: 999 FPENSSLCSAAVTNGVQVRASALFIPELSETNLESNHYRFAYSIRMSLKPEGCIVNGMRF 1178
FPE S LCS AVTNGVQVRASA+FIPE ES+ Y FAYSIRM L PEGCIVNG F
Sbjct: 294 FPEESPLCSTAVTNGVQVRASAVFIPEGCNLLDESHKYLFAYSIRMRLLPEGCIVNGTSF 353
Query: 1179 DSCQLYQAHWTVRENDNIVSEIIEENVVGKNPLLHSGEKEFVYQGCVPIRTPQGSIKGSY 1358
SCQL HW +R ND++VSE+ E V+GK PLL+ G +EFVY+ C P+ + QGSI+G++
Sbjct: 354 GSCQLNWRHWIIRANDHVVSEVNAEAVIGKYPLLYPGGEEFVYESCTPLSSSQGSIEGAF 413
Query: 1359 TFVPGRLTDPKGAEFEVEVPQIFLKSFFEDPNYIF 1463
TFVPGRL DPKG+ FEVEV + L+ P+YIF
Sbjct: 414 TFVPGRLADPKGSAFEVEVGRFPLQC----PDYIF 444
>ref|XP_003606823.1| F-box protein SKIP16 [Medicago truncatula]
gi|355507878|gb|AES89020.1| F-box protein SKIP16
[Medicago truncatula]
Length = 443
Score = 477 bits (1228), Expect = e-132
Identities = 242/455 (53%), Positives = 317/455 (69%), Gaps = 2/455 (0%)
Frame = +3
Query: 105 MSIENVGGLAIYKILSKLGPRDTARVGCVSHRFVEWAFDEFLWYQFCIQELQLSSPEDPL 284
M +E+VG LAI++I+ L P D AR+ CVS+RF + D+ LW + C +EL L+ P D L
Sbjct: 1 MDLESVGDLAIHEIMENLKPEDIARISCVSNRFKSFTSDDSLWSKICFRELSLTQPIDHL 60
Query: 285 GNPTPSFKVAYQSWRESFGMYPWSLVLRVRRCWRRIKSWLVVNFPEAMTTLRKGATEDEL 464
GNPTPSFK AYQ+WRE+F MYPWSLV RV+RCW IK+WL NFPEA TL +GA+E E+
Sbjct: 61 GNPTPSFKEAYQTWREAFVMYPWSLVKRVKRCWDNIKTWLTNNFPEAKETLCEGASEVEI 120
Query: 465 NNLEKSLEVKLPLATRLLYRFCDGQ--DQVEYSESFSESLLGLIGGYSFCGHLVNVYLLP 638
LE L VKLPL TR+LYRF +GQ ++ ++ S S+ LG+IGGYSF H VNVYLLP
Sbjct: 121 QELEDVLNVKLPLPTRILYRFHNGQEIEKHDHDTSTSDISLGIIGGYSFYDHFVNVYLLP 180
Query: 639 LDEVISVTNDVRRQLFEDVRLVFGTEYLVVAASSTEGEKFFFLSCRNGELSAGTGNLLEN 818
+ +VI T +Q+ ++ + ++Y++VAASST EK FFL+C NG+L GT NLL N
Sbjct: 181 ISQVIQET----QQISHNLGFLRRSKYVLVAASSTYREKLFFLNCTNGQLYVGTRNLLTN 236
Query: 819 GEMSPCVPDDLIRSIHDVRDCQQQDGLLLWLEEHGRHLESGLVKVSEEMSEEMITRYISL 998
++ PCVP +LI H++ + QD +LLWLEEHGR L+ G +K+ EE + + ISL
Sbjct: 237 RDLMPCVPQNLISLHHEMDSEKIQDAMLLWLEEHGRRLQRGFIKLLEEGN----AKSISL 292
Query: 999 FPENSSLCSAAVTNGVQVRASALFIPELSETNLESNHYRFAYSIRMSLKPEGCIVNGMRF 1178
FPE S +CS AVTNGVQ+RASAL +PE + + Y F+YSIRMSL+P+GC++NGM
Sbjct: 293 FPEESPVCSTAVTNGVQIRASALLVPEGVDLQGDREKYLFSYSIRMSLQPQGCVINGMSH 352
Query: 1179 DSCQLYQAHWTVRENDNIVSEIIEENVVGKNPLLHSGEKEFVYQGCVPIRTPQGSIKGSY 1358
SCQLY HW +R ND +VS++ E V+G PLL G+KEFVYQ C P+ T GSI+GS+
Sbjct: 353 SSCQLYWRHWIIRANDAVVSDVNGEAVIGMYPLLRPGDKEFVYQSCSPLPTSSGSIEGSF 412
Query: 1359 TFVPGRLTDPKGAEFEVEVPQIFLKSFFEDPNYIF 1463
TFVPGRL DP+G F V+V L+ P+YIF
Sbjct: 413 TFVPGRLVDPRGDPFLVQVAHFPLQL----PDYIF 443
>ref|XP_002271295.2| PREDICTED: F-box protein SKIP16-like [Vitis vinifera]
Length = 443
Score = 473 bits (1216), Expect = e-131
Identities = 248/455 (54%), Positives = 313/455 (68%), Gaps = 2/455 (0%)
Frame = +3
Query: 105 MSIENVGGLAIYKILSKLGPRDTARVGCVSHRFVEWAFDEFLWYQFCIQELQLSSPEDPL 284
M +E++G LAI I+SKL +DT V CVS + A +E LW C Q+L LS+P DPL
Sbjct: 1 MRLEDLGDLAINAIISKLDAKDTVAVSCVSKKLRVSASEESLWLNHCSQDLGLSAPIDPL 60
Query: 285 GNPTPSFKVAYQSWRESFGMYPWSLVLRVRRCWRRIKSWLVVNFPEAMTTLRKGATEDEL 464
G P PSFK YQ WRESFGMYPW LV RV+RCW R+K+WL NFP+A TLRKGATE E+
Sbjct: 61 GKPAPSFKETYQLWRESFGMYPWPLVKRVKRCWDRLKNWLSANFPDADATLRKGATEVEI 120
Query: 465 NNLEKSLEVKLPLATRLLYRFCDGQDQVEYSESFSE--SLLGLIGGYSFCGHLVNVYLLP 638
LE L+VKLPL TRLLYRFCDGQ+ E + LG++GGY HLVNV LLP
Sbjct: 121 EALENILKVKLPLPTRLLYRFCDGQELTEEDVGGTALGGSLGIMGGYCCNDHLVNVCLLP 180
Query: 639 LDEVISVTNDVRRQLFEDVRLVFGTEYLVVAASSTEGEKFFFLSCRNGELSAGTGNLLEN 818
L +VI T ++ QL ++Y++VAASST KFFFL+C G+L GT +L+
Sbjct: 181 LRQVILETKEITDQLGFSTT----SKYVIVAASSTYIGKFFFLNCTTGQLYVGTRSLVSA 236
Query: 819 GEMSPCVPDDLIRSIHDVRDCQQQDGLLLWLEEHGRHLESGLVKVSEEMSEEMITRYISL 998
GEM PCVP+ LI +HD+ QQQD +LLWLEEH R L++G++K + +E + R I+L
Sbjct: 237 GEMIPCVPNALISPMHDMNTGQQQDAMLLWLEEHVRRLQNGIIK----LRKEGMIRSINL 292
Query: 999 FPENSSLCSAAVTNGVQVRASALFIPELSETNLESNHYRFAYSIRMSLKPEGCIVNGMRF 1178
FPE LCS AVTNG+QVRASA+FIPE +S+ Y FAYSIRM L PEGCIVNG+ F
Sbjct: 293 FPEEPPLCSTAVTNGIQVRASAVFIPEGCNLRDKSHKYVFAYSIRMRLLPEGCIVNGISF 352
Query: 1179 DSCQLYQAHWTVRENDNIVSEIIEENVVGKNPLLHSGEKEFVYQGCVPIRTPQGSIKGSY 1358
SCQL HW +R ND++VSE+ E V+GK PLL+ G +EFVY+ C + + +GSI+G++
Sbjct: 353 GSCQLNWRHWIIRANDHVVSEVNAEAVIGKYPLLYPGGEEFVYESCTHLSSSRGSIEGAF 412
Query: 1359 TFVPGRLTDPKGAEFEVEVPQIFLKSFFEDPNYIF 1463
TFVPGRL DPKG+ FEVEV + L+ P+YIF
Sbjct: 413 TFVPGRLADPKGSAFEVEVGRFPLQC----PDYIF 443