BLASTX nr result

ID: Cnidium21_contig00007823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007823
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136382.1| PREDICTED: snakin-2-like [Cucumis sativus] g...   113   2e-23
emb|CAB45241.1| GEG protein [Gerbera hybrid cultivar]                 111   5e-23
ref|XP_002307720.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23
ref|NP_179433.2| Gibberellin-regulated family protein [Arabidops...   110   1e-22
ref|XP_002884133.1| predicted protein [Arabidopsis lyrata subsp....   110   2e-22

>ref|XP_004136382.1| PREDICTED: snakin-2-like [Cucumis sativus]
           gi|449505754|ref|XP_004162560.1| PREDICTED:
           snakin-2-like [Cucumis sativus]
          Length = 102

 Score =  113 bits (282), Expect = 2e-23
 Identities = 50/90 (55%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
 Frame = -1

Query: 401 VLLLIFI-TDFQHIVGLNGPVASPVAPPSINCTASCDTRCSETKRPNLCKRACGSCCGRC 225
           +L+L F+  D Q +VG+    +SP    +I+C  +C +RC  + RPNLC RACG+CC RC
Sbjct: 15  LLVLCFVEADDQMVVGV--AASSPTKTQNIDCGGACASRCKLSSRPNLCHRACGTCCARC 72

Query: 224 HCVPPGTSGNYEACPCYFNLKTHNNTRKCP 135
            CVPPGTSGNYEACPCY  L TH   RKCP
Sbjct: 73  SCVPPGTSGNYEACPCYATLTTHGGRRKCP 102


>emb|CAB45241.1| GEG protein [Gerbera hybrid cultivar]
          Length = 101

 Score =  111 bits (278), Expect = 5e-23
 Identities = 47/93 (50%), Positives = 61/93 (65%)
 Frame = -1

Query: 413 AFAVVLLLIFITDFQHIVGLNGPVASPVAPPSINCTASCDTRCSETKRPNLCKRACGSCC 234
           AFA++ +L+ +   Q    +N    + +A   INC A+C  RC  + RPNLC RACG+CC
Sbjct: 9   AFALLSMLLLLQLGQAYEMVNKIDEATIAASKINCGAACKARCRLSSRPNLCHRACGTCC 68

Query: 233 GRCHCVPPGTSGNYEACPCYFNLKTHNNTRKCP 135
            RC CVPPGTSGN + CPCY+N+ TH   RKCP
Sbjct: 69  ARCRCVPPGTSGNQKVCPCYYNMTTHGGRRKCP 101


>ref|XP_002307720.1| predicted protein [Populus trichocarpa] gi|222857169|gb|EEE94716.1|
           predicted protein [Populus trichocarpa]
          Length = 102

 Score =  111 bits (277), Expect = 7e-23
 Identities = 45/88 (51%), Positives = 61/88 (69%)
 Frame = -1

Query: 398 LLLIFITDFQHIVGLNGPVASPVAPPSINCTASCDTRCSETKRPNLCKRACGSCCGRCHC 219
           LL++ + +  H   +N  +A+   P  I+C ++C+ RC  + RP LCKRACG+CC RC C
Sbjct: 16  LLVLHLAEADHDT-VNSNLAASSPPTKIDCGSACEARCQLSSRPRLCKRACGTCCSRCSC 74

Query: 218 VPPGTSGNYEACPCYFNLKTHNNTRKCP 135
           VPPGT+GNY+ACPCY +L TH   RKCP
Sbjct: 75  VPPGTAGNYDACPCYASLTTHGGRRKCP 102


>ref|NP_179433.2| Gibberellin-regulated family protein [Arabidopsis thaliana]
           gi|357580451|sp|F4IQJ4.1|GASAB_ARATH RecName:
           Full=Gibberellin-regulated protein 11; AltName:
           Full=GAST1 protein homolog 11; Flags: Precursor
           gi|330251674|gb|AEC06768.1| Gibberellin-regulated family
           protein [Arabidopsis thaliana]
          Length = 94

 Score =  110 bits (275), Expect = 1e-22
 Identities = 48/99 (48%), Positives = 61/99 (61%)
 Frame = -1

Query: 431 MAAFSRAFAVVLLLIFITDFQHIVGLNGPVASPVAPPSINCTASCDTRCSETKRPNLCKR 252
           MA F    A +L+ + + DF H       + +    P I+C + C  RCS + RPNLC R
Sbjct: 1   MAVFRVLLASLLISLLVLDFVH-----ADMVTSNDAPKIDCNSRCQERCSLSSRPNLCHR 55

Query: 251 ACGSCCGRCHCVPPGTSGNYEACPCYFNLKTHNNTRKCP 135
           ACG+CC RC+CV PGTSGNY+ CPCY +L TH   RKCP
Sbjct: 56  ACGTCCARCNCVAPGTSGNYDKCPCYGSLTTHGGRRKCP 94


>ref|XP_002884133.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297329973|gb|EFH60392.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 94

 Score =  110 bits (274), Expect = 2e-22
 Identities = 49/99 (49%), Positives = 60/99 (60%)
 Frame = -1

Query: 431 MAAFSRAFAVVLLLIFITDFQHIVGLNGPVASPVAPPSINCTASCDTRCSETKRPNLCKR 252
           MA F    A +L+ + + DF H   +    A     P I+C + C  RCS + RPNLC R
Sbjct: 1   MAVFRVLLASLLISLLVLDFVHADMVTSDNA-----PKIDCKSRCQERCSLSSRPNLCHR 55

Query: 251 ACGSCCGRCHCVPPGTSGNYEACPCYFNLKTHNNTRKCP 135
           AC +CC RC+CVPPGT GNY+ CPCY NL TH   RKCP
Sbjct: 56  ACETCCARCNCVPPGTYGNYDKCPCYANLTTHGGRRKCP 94


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