BLASTX nr result
ID: Cnidium21_contig00007791
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00007791
(1778 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274321.2| PREDICTED: pentatricopeptide repeat-containi... 317 9e-84
ref|XP_002512090.1| pentatricopeptide repeat-containing protein,... 308 3e-81
ref|XP_004144175.1| PREDICTED: pentatricopeptide repeat-containi... 302 2e-79
gb|AAM61409.1| unknown [Arabidopsis thaliana] 292 2e-76
ref|NP_564247.1| pentatricopeptide repeat-containing protein [Ar... 292 2e-76
>ref|XP_002274321.2| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
mitochondrial-like [Vitis vinifera]
gi|297738080|emb|CBI27281.3| unnamed protein product
[Vitis vinifera]
Length = 616
Score = 317 bits (811), Expect = 9e-84
Identities = 182/413 (44%), Positives = 274/413 (66%), Gaps = 7/413 (1%)
Frame = -2
Query: 1531 QSRLFTLVMKKFGDVTKTSKEKIID--VHQVSLKKLLEKNQMKAALKYMDFNLESGYVMP 1358
Q+R K F + +T KE + D +++ + L +Q+ AAL+Y+D L+SGY++
Sbjct: 192 QARETEAAEKLFQRMLQTGKESMPDDESYELVVGMLFLTDQIDAALRYVDLTLKSGYMLS 251
Query: 1357 GDMFTEFVFHCYRKRDTKKMDKRLVSFIE--KFMKNDQAFYPSWNSCFYMLDMSIQAQNS 1184
+F E V C K ++D LVS IE K M ++A PSWN C ++ D+++Q NS
Sbjct: 252 MRVFAECVRSCVNKG---RLDA-LVSIIERCKTMDQNKALSPSWNMCIFIADIAMQEDNS 307
Query: 1183 ELAYYALLFIRKFIAASEISEPRMHYFVEEELIIPVLQLAGKTRNIKLFDVACVLLDLSL 1004
+LA+YAL F+ ++IA E + + V+E L++ L AG+T + L D + +L SL
Sbjct: 308 KLAFYALEFMARWIARGENARGPVLLSVDEGLVVSALGTAGRTYSSTLLDASWAILRRSL 367
Query: 1003 GQNVA-EADTFVAKICAYASLGNLKLAHNSLFKLESLYRGA-KEAT-DLFSPFSALNPLV 833
Q A + ++++AKI A A+LGNL+ A ++L + E+ YR + KEA D+FSPF++L+PLV
Sbjct: 368 RQKKAPQPESYLAKIYADAALGNLQRAFSTLHEFETAYRNSPKEAEEDIFSPFTSLHPLV 427
Query: 832 MAYSKDGCATIDSIYYQLEDLSKENPPYKSVVALNCLILGCSNIGDAGRAWQTFESIGTT 653
MA SK G T+D++Y+QLE+LS+ +PPYKSV ALNC+ILGC+NI D RA+QTFE+IG++
Sbjct: 428 MASSKKGFETLDTVYFQLENLSRADPPYKSVAALNCVILGCANIWDLDRAYQTFEAIGSS 487
Query: 652 FGLTPDIDSYNCLICAYLKGDEREEALQLFEDFIYLGVKPNATTYALLLHAHVTARDSKS 473
FGLTPDI SYN L+ A+ K + EA ++FE LG+KPNA +++LL+ AH+ RD K+
Sbjct: 488 FGLTPDIHSYNALMYAFGKLKKTFEASRVFEHLTSLGIKPNAMSFSLLVDAHLINRDQKA 547
Query: 472 ALSIVEEMVISGFEPTKKVLKKIYSCAVMENDAASKVHVRALAIKFNISMSSK 314
ALS++EEM+ +GF P+K++LKK+ + E D S V +LA KF I M ++
Sbjct: 548 ALSVIEEMINAGFAPSKEILKKVRRRCIREMDYESNDQVESLARKFKIRMGTE 600
>ref|XP_002512090.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223549270|gb|EEF50759.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 619
Score = 308 bits (789), Expect = 3e-81
Identities = 188/457 (41%), Positives = 279/457 (61%), Gaps = 20/457 (4%)
Frame = -2
Query: 1624 HHKLLAGVQGRNITTELDSRRYVLNQSDILNQSRLFTLVMKKFGDVTKTSK-EKII---- 1460
+H L A + +L + +L + F LV+K +T+ EK++
Sbjct: 150 NHYLRANLMTNATAVDLLDLLAQMEDYAVLPNTASFNLVLKAMFQARETAAAEKLLQRME 209
Query: 1459 ----------DVHQVSLKKLLEKNQMKAALKYMDFNLESGYVMPGDMFTEFVFHCYRKRD 1310
+ + + + L NQ+ AALKY+D L++G+ + +FTE V C K
Sbjct: 210 LTGNESQPDDESYDLVIGMLFSTNQIDAALKYIDKTLKNGHTLSMRVFTECVKSCVNKG- 268
Query: 1309 TKKMDKRLVSFIEKFMKNDQ--AFYPSWNSCFYMLDMSIQAQNSELAYYALLFIRKFIAA 1136
++D LVS IEK K DQ A P+WN C+Y+ ++++Q NS+LAYYAL F+ K+IA
Sbjct: 269 --RLDT-LVSIIEKCKKVDQNKALSPTWNMCYYIAEVAMQEDNSKLAYYALEFMAKWIAR 325
Query: 1135 SEISEPRMHYFVEEELIIPVLQLAGKTRNIKLFDVACVLLDLSLGQNVAEA-DTFVAKIC 959
E + P + V+E L++ L AG+T + L D + +L SL A + ++++ +I
Sbjct: 326 GENARPAILLSVDEGLVVSALGTAGRTYSSTLLDASWAILRRSLRDKKAPSPESYLGRIY 385
Query: 958 AYASLGNLKLAHNSLFKLESLYRGA-KEATD-LFSPFSALNPLVMAYSKDGCATIDSIYY 785
AYASLGNL+ A +L + ES Y + KEA + LFSPF++LNPLV+A SK G T+D++Y+
Sbjct: 386 AYASLGNLQKAFTTLREYESAYDSSEKEAEEELFSPFTSLNPLVVACSKKGFETLDTVYF 445
Query: 784 QLEDLSKENPPYKSVVALNCLILGCSNIGDAGRAWQTFESIGTTFGLTPDIDSYNCLICA 605
QLE+LS+ PYKSV ALNC+ILGC+NI D RA+QTFE+IG++F LTP+I SYN LI A
Sbjct: 446 QLENLSRAERPYKSVAALNCIILGCANIWDIDRAYQTFEAIGSSFELTPNIHSYNALIYA 505
Query: 604 YLKGDEREEALQLFEDFIYLGVKPNATTYALLLHAHVTARDSKSALSIVEEMVISGFEPT 425
+ + + EA ++FE + LG+KPNATTY LL+ AH+ RD K+ALS++EEM+ +GF P+
Sbjct: 506 FGRLKKTFEAARVFEHLVSLGIKPNATTYLLLVDAHLINRDVKTALSVIEEMMSAGFTPS 565
Query: 424 KKVLKKIYSCAVMENDAASKVHVRALAIKFNISMSSK 314
K+ LKK+ V E D S V ++A I M ++
Sbjct: 566 KETLKKVRRRCVREMDYDSDDRVGSVAKNCKIRMGTE 602
>ref|XP_004144175.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
mitochondrial-like [Cucumis sativus]
gi|449489211|ref|XP_004158247.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g26460,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 302 bits (774), Expect = 2e-79
Identities = 176/413 (42%), Positives = 262/413 (63%), Gaps = 7/413 (1%)
Frame = -2
Query: 1531 QSRLFTLVMKKFGDVTKTSKEKIID--VHQVSLKKLLEKNQMKAALKYMDFNLESGYVMP 1358
Q+R K + +T +E + D + + ++ LL Q+ AALKY+D + G+++
Sbjct: 193 QARETEAAEKLLERMLQTGEESMPDDESYDLVIRMLLSTYQIDAALKYIDLTSKPGHMLS 252
Query: 1357 GDMFTEFVFHCYRKRDTKKMDKRLVSFIEKFMKN--DQAFYPSWNSCFYMLDMSIQAQNS 1184
F+E V C RK ++D LVS I+K ++A P+WNSC+ + + Q NS
Sbjct: 253 LKAFSECVRSCVRKG---RLDT-LVSVIDKCKATVENKALSPTWNSCYDIAIAATQQDNS 308
Query: 1183 ELAYYALLFIRKFIAASEISEPRMHYFVEEELIIPVLQLAGKTRNIKLFDVACVLLDLSL 1004
+LAYYAL F+ ++IA E + P +H V+E L++ L AG+T + L D A +L SL
Sbjct: 309 KLAYYALEFMAQWIARGENARPPVHLSVDEGLVVSTLGTAGRTYSSSLLDAAWSVLKRSL 368
Query: 1003 GQN-VAEADTFVAKICAYASLGNLKLAHNSLFKLESLYRGAKEAT--DLFSPFSALNPLV 833
Q V ++F+ KI ASLGNL+ A ++L + E YR + + + D+FSPF++L+PLV
Sbjct: 369 RQKKVPNPESFLGKIYTLASLGNLQRAFSTLREFEEAYRNSDDGSCEDMFSPFTSLHPLV 428
Query: 832 MAYSKDGCATIDSIYYQLEDLSKENPPYKSVVALNCLILGCSNIGDAGRAWQTFESIGTT 653
+A SK G T+D +Y+QLE+LS+ +PPYKSV ALNC+ILGC+NI D RA+QTFE+IG++
Sbjct: 429 VACSKKGFETLDLVYFQLENLSRADPPYKSVAALNCVILGCANIWDLDRAYQTFEAIGSS 488
Query: 652 FGLTPDIDSYNCLICAYLKGDEREEALQLFEDFIYLGVKPNATTYALLLHAHVTARDSKS 473
FGLTP+I SYN L+ A+ + + EA ++FE + LG+KPNAT+Y+LL AH+ RD KS
Sbjct: 489 FGLTPNIHSYNALMYAFGRLKKTFEAARVFEHLVGLGIKPNATSYSLLADAHLINRDPKS 548
Query: 472 ALSIVEEMVISGFEPTKKVLKKIYSCAVMENDAASKVHVRALAIKFNISMSSK 314
AL+ ++ MV +GF P+K++LKK+ + E D S V LA F I M S+
Sbjct: 549 ALAAIDNMVTAGFAPSKELLKKVRRRCIREQDYDSNDKVGNLAQNFKIRMGSE 601
>gb|AAM61409.1| unknown [Arabidopsis thaliana]
Length = 630
Score = 292 bits (748), Expect = 2e-76
Identities = 164/369 (44%), Positives = 242/369 (65%), Gaps = 5/369 (1%)
Frame = -2
Query: 1405 ALKYMDFNLESGYVMPGDMFTEFVFHCYRKRDTKKMDKRLVSFIE--KFMKNDQAFYPSW 1232
A+K MD L+SGY++ +FTE V C K T LVS IE K + +++ PSW
Sbjct: 247 AMKVMDTALKSGYMLSTSVFTECVRSCVAKGRTDT----LVSIIERCKAVDRNKSLCPSW 302
Query: 1231 NSCFYMLDMSIQAQNSELAYYALLFIRKFIAASEISEPRMHYFVEEELIIPVLQLAGKTR 1052
C Y+ +++IQ NS+LA+YA F+ K+I E++ P + + V+E L++ L A +T
Sbjct: 303 ILCNYIAEVAIQEDNSKLAFYAFEFMFKWITRGEMARPSVIFSVDEGLVVAGLASAARTC 362
Query: 1051 NIKLFDVACVLLDLSL-GQNVAEADTFVAKICAYASLGNLKLAHNSLFKLESLYRGAKEA 875
+ L + + +L SL G+ A+ +++AKI AYASLGNL+ A SL +LES Y +++
Sbjct: 363 SSSLVEGSWTILKQSLRGRKAAKPASYIAKINAYASLGNLQKAFTSLHELESAYADSEKE 422
Query: 874 T--DLFSPFSALNPLVMAYSKDGCATIDSIYYQLEDLSKENPPYKSVVALNCLILGCSNI 701
++ SPF++L PLV+A SK G T+D +Y+QLE LS+ + PYKSV ALNC+ILGC+N
Sbjct: 423 VVEEMLSPFTSLYPLVVACSKKGFETLDEVYFQLESLSQGDTPYKSVAALNCIILGCANT 482
Query: 700 GDAGRAWQTFESIGTTFGLTPDIDSYNCLICAYLKGDEREEALQLFEDFIYLGVKPNATT 521
D RA+QTFE+I +FGLTP+IDSYN L+ A+ K + EA +FE + +GVKP++ T
Sbjct: 483 WDLDRAYQTFEAISASFGLTPNIDSYNALLYAFGKVKKTFEATNVFEHLVSIGVKPDSRT 542
Query: 520 YALLLHAHVTARDSKSALSIVEEMVISGFEPTKKVLKKIYSCAVMENDAASKVHVRALAI 341
Y+LL+ AH+ RD KSAL++V++M+ +GFEP+++ LKK+ V E D + V ALA
Sbjct: 543 YSLLVDAHLINRDPKSALTVVDDMIKAGFEPSRETLKKLRRRCVREMDDENDDQVEALAK 602
Query: 340 KFNISMSSK 314
KF I M S+
Sbjct: 603 KFQIRMGSE 611
>ref|NP_564247.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173405|sp|Q9FZD1.1|PPR58_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g26460, mitochondrial; Flags: Precursor
gi|9797754|gb|AAF98572.1|AC013427_15 Contains similarity
to a hypothetical protein F21B7.16 gi|7485908 from
Arabidopsis thaliana BAC F21B7 gb|AC002560 and contains
multiple PPR PF|01535 repeats and a domain of unknown
function PF|00668. ESTs gb|T45755, gb|AI993167,
gb|AV554476, gb|T46823, gb|T41981, gb|AV546597,
gb|AI099868 come from this gene [Arabidopsis thaliana]
gi|19698979|gb|AAL91225.1| unknown protein [Arabidopsis
thaliana] gi|22136300|gb|AAM91228.1| unknown protein
[Arabidopsis thaliana] gi|332192573|gb|AEE30694.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 292 bits (747), Expect = 2e-76
Identities = 164/369 (44%), Positives = 241/369 (65%), Gaps = 5/369 (1%)
Frame = -2
Query: 1405 ALKYMDFNLESGYVMPGDMFTEFVFHCYRKRDTKKMDKRLVSFIE--KFMKNDQAFYPSW 1232
A+K MD L+SGY++ +FTE V C K T LVS IE K + +++ PSW
Sbjct: 247 AMKVMDTALKSGYMLSTSVFTECVRSCVAKGRTDT----LVSIIERCKAVDRNKSLCPSW 302
Query: 1231 NSCFYMLDMSIQAQNSELAYYALLFIRKFIAASEISEPRMHYFVEEELIIPVLQLAGKTR 1052
C Y+ +++IQ NS+LA+YA F+ K+I E++ P + + V+E L++ L A +T
Sbjct: 303 ILCNYIAEVAIQEDNSKLAFYAFEFMFKWITRGEMARPSVIFSVDEGLVVAGLASAARTC 362
Query: 1051 NIKLFDVACVLLDLSL-GQNVAEADTFVAKICAYASLGNLKLAHNSLFKLESLYRGAKEA 875
+ L + + +L SL G+ A +++AKI AYASLGNL+ A SL +LES Y +++
Sbjct: 363 SSSLVEGSWTILKQSLRGRKAANPASYIAKINAYASLGNLQKAFTSLHELESAYADSEKE 422
Query: 874 T--DLFSPFSALNPLVMAYSKDGCATIDSIYYQLEDLSKENPPYKSVVALNCLILGCSNI 701
++ SPF++L PLV+A SK G T+D +Y+QLE LS+ + PYKSV ALNC+ILGC+N
Sbjct: 423 VVEEMLSPFTSLYPLVVACSKKGFETLDEVYFQLESLSQGDTPYKSVAALNCIILGCANT 482
Query: 700 GDAGRAWQTFESIGTTFGLTPDIDSYNCLICAYLKGDEREEALQLFEDFIYLGVKPNATT 521
D RA+QTFE+I +FGLTP+IDSYN L+ A+ K + EA +FE + +GVKP++ T
Sbjct: 483 WDLDRAYQTFEAISASFGLTPNIDSYNALLYAFGKVKKTFEATNVFEHLVSIGVKPDSRT 542
Query: 520 YALLLHAHVTARDSKSALSIVEEMVISGFEPTKKVLKKIYSCAVMENDAASKVHVRALAI 341
Y+LL+ AH+ RD KSAL++V++M+ +GFEP+++ LKK+ V E D + V ALA
Sbjct: 543 YSLLVDAHLINRDPKSALTVVDDMIKAGFEPSRETLKKLRRRCVREMDDENDDQVEALAK 602
Query: 340 KFNISMSSK 314
KF I M S+
Sbjct: 603 KFQIRMGSE 611