BLASTX nr result

ID: Cnidium21_contig00007751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007751
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511495.1| tRNA ligase, putative [Ricinus communis] gi|...    70   2e-10
ref|XP_002318002.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002266347.1| PREDICTED: uncharacterized protein LOC100243...    69   5e-10
emb|CAN79617.1| hypothetical protein VITISV_004978 [Vitis vinifera]    69   5e-10
emb|CBI15298.3| unnamed protein product [Vitis vinifera]               67   2e-09

>ref|XP_002511495.1| tRNA ligase, putative [Ricinus communis]
           gi|223550610|gb|EEF52097.1| tRNA ligase, putative
           [Ricinus communis]
          Length = 721

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/57 (61%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
 Frame = -3

Query: 225 AAEQQPVQFPNKADSPVQDKAE-VQKRGFLDLNELAPGSGFDDGPNSMMKGEDTDNF 58
           A E+   Q P K++SP QD+ E V+KR FLDLNELAPGS FDDGPN+++K ED D+F
Sbjct: 665 ATEKVQSQPPEKSNSPGQDEVEGVRKRRFLDLNELAPGSSFDDGPNTVLKDEDRDDF 721


>ref|XP_002318002.1| predicted protein [Populus trichocarpa] gi|222858675|gb|EEE96222.1|
           predicted protein [Populus trichocarpa]
          Length = 252

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/66 (56%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
 Frame = -3

Query: 252 EAVYGNQQAAAEQQPVQFPNKADSPVQDKAE-VQKRGFLDLNELAPGSGFDDGPNSMMKG 76
           + V G+   A E+Q  Q P +++SPVQ++ E V+KR FLDLNELAPGSGFDD PN++MK 
Sbjct: 188 QPVEGDTVIAREEQN-QPPEESNSPVQEEVEGVRKRRFLDLNELAPGSGFDDSPNTVMKD 246

Query: 75  EDTDNF 58
           ED ++F
Sbjct: 247 EDRNDF 252


>ref|XP_002266347.1| PREDICTED: uncharacterized protein LOC100243405 [Vitis vinifera]
          Length = 718

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 36/61 (59%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
 Frame = -3

Query: 237 NQQAAAEQQPVQFPNKADSPVQDKAE-VQKRGFLDLNELAPGSGFDDGPNSMMKGEDTDN 61
           N     E++  Q   K++SPVQD+AE V+KR FLDLNELAPGSGFDDGPN+++K +DT++
Sbjct: 659 NYPQTVEKEINQPSEKSNSPVQDEAEGVRKRRFLDLNELAPGSGFDDGPNTILK-DDTND 717

Query: 60  F 58
           F
Sbjct: 718 F 718


>emb|CAN79617.1| hypothetical protein VITISV_004978 [Vitis vinifera]
          Length = 757

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 36/61 (59%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
 Frame = -3

Query: 237 NQQAAAEQQPVQFPNKADSPVQDKAE-VQKRGFLDLNELAPGSGFDDGPNSMMKGEDTDN 61
           N     E++  Q   K++SPVQD+AE V+KR FLDLNELAPGSGFDDGPN+++K +DT++
Sbjct: 698 NYPQTVEKEINQPSEKSNSPVQDEAEGVRKRRFLDLNELAPGSGFDDGPNTILK-DDTND 756

Query: 60  F 58
           F
Sbjct: 757 F 757


>emb|CBI15298.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/46 (71%), Positives = 43/46 (93%), Gaps = 1/46 (2%)
 Frame = -3

Query: 192 KADSPVQDKAE-VQKRGFLDLNELAPGSGFDDGPNSMMKGEDTDNF 58
           K++SPVQD+AE V+KR FLDLNELAPGSGFDDGPN+++K +DT++F
Sbjct: 518 KSNSPVQDEAEGVRKRRFLDLNELAPGSGFDDGPNTILK-DDTNDF 562


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