BLASTX nr result

ID: Cnidium21_contig00007749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007749
         (1044 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276972.2| PREDICTED: probable DEAD-box ATP-dependent R...   420   e-133
ref|XP_002509758.1| dead box ATP-dependent RNA helicase, putativ...   412   e-131
ref|XP_003532405.1| PREDICTED: putative DEAD-box ATP-dependent R...   413   e-131
ref|XP_002304481.1| predicted protein [Populus trichocarpa] gi|2...   408   e-129
ref|XP_002886417.1| hypothetical protein ARALYDRAFT_893124 [Arab...   408   e-128

>ref|XP_002276972.2| PREDICTED: probable DEAD-box ATP-dependent RNA helicase 48-like
            [Vitis vinifera] gi|297742558|emb|CBI34707.3| unnamed
            protein product [Vitis vinifera]
          Length = 754

 Score =  420 bits (1079), Expect(2) = e-133
 Identities = 204/257 (79%), Positives = 235/257 (91%), Gaps = 1/257 (0%)
 Frame = +1

Query: 1    EADHLLDLGFRKDMEKIVDCLPRQRQSLLFSATIPKEVRRVSQLVLKREHAYIDTIGLG- 177
            EADHLLDLGFRKDMEKIVDCLPRQRQSLLFSAT+PKEVRR+SQLVLK+EHA++DT+GLG 
Sbjct: 448  EADHLLDLGFRKDMEKIVDCLPRQRQSLLFSATVPKEVRRISQLVLKKEHAFVDTVGLGN 507

Query: 178  LETHAKVNQSYLVVPHEQNFQMVLHLLKEHISQEVDYKVIVFCTTAMMASLMFTLLRELR 357
             ETHAKV QSYLV PH+ +FQ+V HLLK+HI Q  DYKVIVFCTTAM+ SL+F LL+E++
Sbjct: 508  AETHAKVRQSYLVAPHKLHFQIVYHLLKDHILQVPDYKVIVFCTTAMVTSLVFLLLQEMK 567

Query: 358  LNVREMHSRKPQLYRTRISDEFKESKRLILISSDVSARGMNYPDVTLVIQVGIPSDRANY 537
            +NVRE+HSRKPQ+YRTRIS+EF+ESKRL+LI+SDVSARG+NYPDVTLVIQ+GIPSDR  Y
Sbjct: 568  VNVREIHSRKPQIYRTRISEEFRESKRLVLITSDVSARGINYPDVTLVIQMGIPSDREQY 627

Query: 538  IHRLGRTGREGKAGEGILLVAPWEEHFLDEIKDLPLVKISLPHLDPNMRLKVEDTMAKID 717
            IHRLGRTGREGK GEGILLVAPWEE+FLDEIKDLP+ K  LP LDP+++LKV  +M KID
Sbjct: 628  IHRLGRTGREGKEGEGILLVAPWEEYFLDEIKDLPIEKFPLPLLDPDLKLKVGASMDKID 687

Query: 718  GSIKEAAYHAWLGYYNS 768
             S+KEAAYHAWLGYYNS
Sbjct: 688  TSVKEAAYHAWLGYYNS 704



 Score = 83.6 bits (205), Expect(2) = e-133
 Identities = 40/49 (81%), Positives = 45/49 (91%)
 Frame = +2

Query: 872  REIGRDKTTLVELASKFCDSIGLQRPPALFRKTALKMGLKDIDGIRIRK 1018
            RE GRDKTTLVELA++FC+SIGLQ+PP LFRKTALKMGLK I GIRIR+
Sbjct: 706  RETGRDKTTLVELANQFCESIGLQKPPLLFRKTALKMGLKGIPGIRIRR 754


>ref|XP_002509758.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223549657|gb|EEF51145.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 771

 Score =  412 bits (1059), Expect(2) = e-131
 Identities = 197/257 (76%), Positives = 233/257 (90%), Gaps = 1/257 (0%)
 Frame = +1

Query: 1    EADHLLDLGFRKDMEKIVDCLPRQRQSLLFSATIPKEVRRVSQLVLKREHAYIDTIGLG- 177
            EADHLLDLGFRKD+EKI+DCLPR+R SL+FSATIPKEVRR+SQLVLKREHA+IDT+GLG 
Sbjct: 465  EADHLLDLGFRKDVEKIIDCLPRERHSLMFSATIPKEVRRISQLVLKREHAFIDTVGLGS 524

Query: 178  LETHAKVNQSYLVVPHEQNFQMVLHLLKEHISQEVDYKVIVFCTTAMMASLMFTLLRELR 357
            +ET +KV Q  +VVPHE +FQ+V H LKEHI Q  DYKVIVFCTT M+ SLM+TLLRE++
Sbjct: 525  VETPSKVKQFSVVVPHELHFQVVHHFLKEHILQTPDYKVIVFCTTGMVTSLMYTLLREMK 584

Query: 358  LNVREMHSRKPQLYRTRISDEFKESKRLILISSDVSARGMNYPDVTLVIQVGIPSDRANY 537
            +NV+E+HSRKPQLYRTR+SDEF+ES+R IL+SSDVSARGMNYPDVTLVIQVG+P+DR  Y
Sbjct: 585  MNVKEIHSRKPQLYRTRVSDEFRESRRSILVSSDVSARGMNYPDVTLVIQVGLPTDREQY 644

Query: 538  IHRLGRTGREGKAGEGILLVAPWEEHFLDEIKDLPLVKISLPHLDPNMRLKVEDTMAKID 717
            IHRLGRTGREGK GEGILL+APWEE+FLDE++DLPL K+ +P +DP  +LKVED+M+KID
Sbjct: 645  IHRLGRTGREGKDGEGILLLAPWEEYFLDELEDLPLDKLPIPDIDPETKLKVEDSMSKID 704

Query: 718  GSIKEAAYHAWLGYYNS 768
             S+KEAAYHAWLGYYNS
Sbjct: 705  SSVKEAAYHAWLGYYNS 721



 Score = 85.5 bits (210), Expect(2) = e-131
 Identities = 41/48 (85%), Positives = 46/48 (95%)
 Frame = +2

Query: 872  REIGRDKTTLVELASKFCDSIGLQRPPALFRKTALKMGLKDIDGIRIR 1015
            R+IGRDKTTLVELA++FC+SIGLQRPP LFRKTALKMGLK+I GIRIR
Sbjct: 723  RKIGRDKTTLVELANRFCESIGLQRPPPLFRKTALKMGLKNIPGIRIR 770


>ref|XP_003532405.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 33-like
            [Glycine max]
          Length = 707

 Score =  413 bits (1061), Expect(2) = e-131
 Identities = 199/257 (77%), Positives = 229/257 (89%), Gaps = 1/257 (0%)
 Frame = +1

Query: 1    EADHLLDLGFRKDMEKIVDCLPRQRQSLLFSATIPKEVRRVSQLVLKREHAYIDTIGLG- 177
            EADHLLDLGFRKD+EKIVDCLPRQRQSLLFSAT+PKEVRRVSQLVLKREH Y+DT+G+G 
Sbjct: 401  EADHLLDLGFRKDVEKIVDCLPRQRQSLLFSATMPKEVRRVSQLVLKREHKYVDTVGMGC 460

Query: 178  LETHAKVNQSYLVVPHEQNFQMVLHLLKEHISQEVDYKVIVFCTTAMMASLMFTLLRELR 357
            +ET  KV QSYL+ PHE +FQ+V  +LKEHI Q  DYKVIVFC T M+ SLM+ LLRE++
Sbjct: 461  VETPVKVKQSYLIAPHESHFQLVHQILKEHILQTPDYKVIVFCVTGMVTSLMYNLLREMK 520

Query: 358  LNVREMHSRKPQLYRTRISDEFKESKRLILISSDVSARGMNYPDVTLVIQVGIPSDRANY 537
            +NVRE+HSRKPQLYRTRISDEF+ESK+LIL+SSDVS+RGMNYPDVTLVIQVGIPSDR  Y
Sbjct: 521  MNVREIHSRKPQLYRTRISDEFRESKQLILVSSDVSSRGMNYPDVTLVIQVGIPSDREQY 580

Query: 538  IHRLGRTGREGKAGEGILLVAPWEEHFLDEIKDLPLVKISLPHLDPNMRLKVEDTMAKID 717
            IHRLGRTGRE K GEG+LL+APWEE+FLDEIKDLPL    LP ++P+ +LK+E++MAKID
Sbjct: 581  IHRLGRTGREDKEGEGVLLIAPWEEYFLDEIKDLPLQNFPLPDINPHTKLKIENSMAKID 640

Query: 718  GSIKEAAYHAWLGYYNS 768
              IKEAAYHAWLGYYNS
Sbjct: 641  NDIKEAAYHAWLGYYNS 657



 Score = 84.3 bits (207), Expect(2) = e-131
 Identities = 40/49 (81%), Positives = 46/49 (93%)
 Frame = +2

Query: 872  REIGRDKTTLVELASKFCDSIGLQRPPALFRKTALKMGLKDIDGIRIRK 1018
            REIGR+KTT+ ELA++F +SIGLQRPPALFRKTA+KMGLKDI GIRIRK
Sbjct: 659  REIGREKTTMAELANRFSESIGLQRPPALFRKTAIKMGLKDIPGIRIRK 707


>ref|XP_002304481.1| predicted protein [Populus trichocarpa] gi|222841913|gb|EEE79460.1|
            predicted protein [Populus trichocarpa]
          Length = 798

 Score =  408 bits (1048), Expect(2) = e-129
 Identities = 198/257 (77%), Positives = 229/257 (89%), Gaps = 1/257 (0%)
 Frame = +1

Query: 1    EADHLLDLGFRKDMEKIVDCLPRQRQSLLFSATIPKEVRRVSQLVLKREHAYIDTIGLG- 177
            EADHLLDLGFRKDMEKI+DCLPRQRQSLLFSATIPKEVRR+SQLVLKREHA+I+T+G+G 
Sbjct: 492  EADHLLDLGFRKDMEKILDCLPRQRQSLLFSATIPKEVRRISQLVLKREHAFINTVGVGC 551

Query: 178  LETHAKVNQSYLVVPHEQNFQMVLHLLKEHISQEVDYKVIVFCTTAMMASLMFTLLRELR 357
            +ET AK+ QS+LV PH  +FQ+V HLLKEHI Q  DYKVIVFCTT M+ SLM+ LLRE+ 
Sbjct: 552  VETPAKIKQSFLVSPHRLHFQVVHHLLKEHILQAPDYKVIVFCTTGMVTSLMYLLLREMN 611

Query: 358  LNVREMHSRKPQLYRTRISDEFKESKRLILISSDVSARGMNYPDVTLVIQVGIPSDRANY 537
            +NVREMHSRKPQLYRTR+S+EF+ESKRLIL++SDVSARGMNYPDVTLVIQVGIP DR +Y
Sbjct: 612  MNVREMHSRKPQLYRTRVSNEFRESKRLILVTSDVSARGMNYPDVTLVIQVGIPYDREHY 671

Query: 538  IHRLGRTGREGKAGEGILLVAPWEEHFLDEIKDLPLVKISLPHLDPNMRLKVEDTMAKID 717
            IHRLGRTGREGK GEGILL+APWEE+FL+E+KDLPL K  LP +D     K+E++M+KID
Sbjct: 672  IHRLGRTGREGKDGEGILLLAPWEEYFLNELKDLPLEKFPLPQIDSETNFKMEESMSKID 731

Query: 718  GSIKEAAYHAWLGYYNS 768
             S+KE AYHAWLGYYNS
Sbjct: 732  SSVKEGAYHAWLGYYNS 748



 Score = 83.2 bits (204), Expect(2) = e-129
 Identities = 40/49 (81%), Positives = 46/49 (93%)
 Frame = +2

Query: 872  REIGRDKTTLVELASKFCDSIGLQRPPALFRKTALKMGLKDIDGIRIRK 1018
            REIGRDKTTLVELA++F +SIGL +PP+LFRKTALKMGLKDI GIRIR+
Sbjct: 750  REIGRDKTTLVELANQFSESIGLHKPPSLFRKTALKMGLKDIPGIRIRR 798


>ref|XP_002886417.1| hypothetical protein ARALYDRAFT_893124 [Arabidopsis lyrata subsp.
            lyrata] gi|297332258|gb|EFH62676.1| hypothetical protein
            ARALYDRAFT_893124 [Arabidopsis lyrata subsp. lyrata]
          Length = 808

 Score =  408 bits (1048), Expect(2) = e-128
 Identities = 198/257 (77%), Positives = 231/257 (89%), Gaps = 1/257 (0%)
 Frame = +1

Query: 1    EADHLLDLGFRKDMEKIVDCLPRQRQSLLFSATIPKEVRRVSQLVLKREHAYIDTIGLG- 177
            EAD LLDLGFR+D+EKI+DCLPRQRQSLLFSATIPKEVRRVSQLVLKR+H+YIDTIGLG 
Sbjct: 502  EADLLLDLGFRRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGC 561

Query: 178  LETHAKVNQSYLVVPHEQNFQMVLHLLKEHISQEVDYKVIVFCTTAMMASLMFTLLRELR 357
            +ETH KV QS +V PHE +F +V HLLKEHI+   DYK+IVFC+T M+ SLM+TLLRE++
Sbjct: 562  VETHDKVKQSCIVAPHESHFHLVPHLLKEHINNTPDYKIIVFCSTGMVTSLMYTLLREMK 621

Query: 358  LNVREMHSRKPQLYRTRISDEFKESKRLILISSDVSARGMNYPDVTLVIQVGIPSDRANY 537
            L+VRE+H+RKPQL+RTR+SDEFKESKRLIL++SDVSARGMNYPDVTLVIQVGIPSDR  Y
Sbjct: 622  LSVREIHARKPQLHRTRVSDEFKESKRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQY 681

Query: 538  IHRLGRTGREGKAGEGILLVAPWEEHFLDEIKDLPLVKISLPHLDPNMRLKVEDTMAKID 717
            IHRLGRTGREGK GEG+LL+APWE +FLDE+KDLPL  I +P LD  ++L+V+ +MAKID
Sbjct: 682  IHRLGRTGREGKGGEGLLLIAPWERYFLDELKDLPLEPIPVPDLDSRVKLQVDQSMAKID 741

Query: 718  GSIKEAAYHAWLGYYNS 768
             SIKEAAYHAWLGYYNS
Sbjct: 742  TSIKEAAYHAWLGYYNS 758



 Score = 78.6 bits (192), Expect(2) = e-128
 Identities = 37/49 (75%), Positives = 43/49 (87%)
 Frame = +2

Query: 872  REIGRDKTTLVELASKFCDSIGLQRPPALFRKTALKMGLKDIDGIRIRK 1018
            RE GRDKTTL ELA++FC SIGL++PPALFR+TA+KMGLK I GI IRK
Sbjct: 760  RETGRDKTTLAELANRFCHSIGLEKPPALFRRTAVKMGLKGISGIPIRK 808


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