BLASTX nr result

ID: Cnidium21_contig00007747 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007747
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding prote...   138   1e-30
ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|2...   126   3e-27
ref|XP_002532469.1| double-stranded RNA binding protein, putativ...   115   7e-24
ref|XP_003544264.1| PREDICTED: uncharacterized protein LOC100798...   111   1e-22
ref|XP_004161611.1| PREDICTED: uncharacterized LOC101213863 [Cuc...   105   6e-21

>ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding protein 4-like [Vitis
           vinifera] gi|296087161|emb|CBI33535.3| unnamed protein
           product [Vitis vinifera]
          Length = 333

 Score =  138 bits (347), Expect = 1e-30
 Identities = 77/163 (47%), Positives = 103/163 (63%), Gaps = 4/163 (2%)
 Frame = -1

Query: 662 VYQTAFDGALHSPQFRSTVVVNGASYTSSNVFPTRKAAEMDAARIAL--LSVLQEEDNCS 489
           +YQT  +G  H+P+FRSTV+V+GA+YTS N F  RKAAE D AR+AL  +S   +++ C 
Sbjct: 40  IYQTVNEGFQHAPKFRSTVLVDGATYTSPNTFSHRKAAEQDVARLALEFISKKIKDEGCP 99

Query: 488 IDQEELNFCKAILKEYADKINAEIPDYKTEKGDGL--GFTSSLTFNGNQYVGDEGRNKKE 315
           + +E+  FCK+IL E+A K+N E P Y T + +GL   F SSL FNG  Y GD GRNKKE
Sbjct: 100 LIREDTVFCKSILNEFAVKMNLEKPTYTTVQPEGLLPVFVSSLVFNGVTYTGDAGRNKKE 159

Query: 314 SQHLAARAVIMSILDSDARGVXXXXXXXXXKMLCPAKGKVNNP 186
           ++ LAAR VI+SIL +   G            L  A  +V +P
Sbjct: 160 AEQLAARTVILSILGNSGSGTLLSEIIKSKVKLYAALHRVKDP 202


>ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|222844689|gb|EEE82236.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  126 bits (317), Expect = 3e-27
 Identities = 81/205 (39%), Positives = 111/205 (54%), Gaps = 14/205 (6%)
 Frame = -1

Query: 662 VYQTAFDGALHSPQFRSTVVVNGASYTSSNVFPTRKAAEMDAARIALLSVLQ--EEDNCS 489
           VYQT  +G  H P+FRSTV V+GA Y S   F  RKAAE D A +AL S+L+  +++ C 
Sbjct: 157 VYQTLNEGPAHMPRFRSTVWVDGARYRSQKTFLHRKAAEQDVANLALESILKRVKDEGCP 216

Query: 488 IDQEELNFCKAILKEYADKINAEIPDYKTEKGDGL--GFTSSLTFNGNQYVGDEGRNKKE 315
           +   +  FCK+IL E+A K+N E P Y T +  GL   F S+L F+G  Y GD GRNKKE
Sbjct: 217 LLLGDTVFCKSILNEFAVKVNREKPTYNTVQSPGLLPVFISTLVFDGVSYTGDAGRNKKE 276

Query: 314 SQHLAARAVIMSILDSDARGVXXXXXXXXXKMLCPAKGKVNNPCNAQ----DVGKLVG-- 153
           ++ LAARAVI+S++ +                L  A  +V +P ++Q     V   VG  
Sbjct: 277 AEQLAARAVILSLIGNSGSSKILYEIIKSKSKLYAALDRVKDPSHSQPNIVPVAVKVGHC 336

Query: 152 ----IQTISNVSTSASKGNGPVVVN 90
               +     VST+  +   PV  N
Sbjct: 337 SETTVDQEQEVSTAVVRDAAPVSAN 361


>ref|XP_002532469.1| double-stranded RNA binding protein, putative [Ricinus communis]
           gi|223527827|gb|EEF29925.1| double-stranded RNA binding
           protein, putative [Ricinus communis]
          Length = 289

 Score =  115 bits (288), Expect = 7e-24
 Identities = 65/136 (47%), Positives = 84/136 (61%), Gaps = 6/136 (4%)
 Frame = -1

Query: 662 VYQTAFDGALHSPQFRSTVVVNGASYTSSNVFPTRKAAEMDAARIALLSVLQ----EEDN 495
           +YQT  +G  H P+FRSTV+V+G  YTS N F  RK AE D A++AL S+ +    E  +
Sbjct: 31  IYQTVNEGYPHDPKFRSTVLVDGEEYTSHNTFSHRKEAEQDVAKLALTSITEKIKDEIKD 90

Query: 494 CSIDQEELNFCKAILKEYADKINAEIPDYKTEKGDGLG--FTSSLTFNGNQYVGDEGRNK 321
                E+   CK+IL EYA K+  E+P Y T K  GL   F SS  FNG  Y GD GR K
Sbjct: 91  EKFTHEDTVACKSILNEYAVKMQLEMPTYNTVKQGGLFPIFVSSSVFNGVTYNGDIGRTK 150

Query: 320 KESQHLAARAVIMSIL 273
           KE++ LAARA ++S+L
Sbjct: 151 KEAEQLAARAAVLSLL 166


>ref|XP_003544264.1| PREDICTED: uncharacterized protein LOC100798730 [Glycine max]
          Length = 434

 Score =  111 bits (278), Expect = 1e-22
 Identities = 63/142 (44%), Positives = 88/142 (61%), Gaps = 6/142 (4%)
 Frame = -1

Query: 662 VYQTAFDGALHSPQFRSTVVVNGASYTSSNVFPTRKAAEMDAARIALLSVLQ--EEDNCS 489
           VYQT  +G  HSP+FRSTV V    YTS + F  +KAAE +AAR+AL S+L+   ++  S
Sbjct: 19  VYQTINEGQDHSPKFRSTVWVADMGYTSQSTFSHKKAAEHEAARLALESILKRTRDEGLS 78

Query: 488 IDQEELNFCKAILKEYADKINAEIPDYKTEKGDGLG----FTSSLTFNGNQYVGDEGRNK 321
           +  +   F K+I+ EYADK++ E P Y T++    G    F +SL FNG  Y GD  R K
Sbjct: 79  LVNQISPFSKSIMNEYADKLHVEQPTYNTDQQQLGGVLPIFITSLVFNGTSYTGDPARTK 138

Query: 320 KESQHLAARAVIMSILDSDARG 255
           KE++  AA+A I+SI+   + G
Sbjct: 139 KEAEQSAAKAAILSIMGDSSSG 160


>ref|XP_004161611.1| PREDICTED: uncharacterized LOC101213863 [Cucumis sativus]
          Length = 385

 Score =  105 bits (263), Expect = 6e-21
 Identities = 60/133 (45%), Positives = 83/133 (62%), Gaps = 4/133 (3%)
 Frame = -1

Query: 662 VYQTAFDGALHSPQFRSTVVVNGASYTSSNVFPTRKAAEMDAARIAL--LSVLQEEDNCS 489
           VYQT  +G+   P++RSTV+V+   Y S N F  R+AAE DAAR+A   +S   ++D   
Sbjct: 95  VYQTIDEGSPSLPKYRSTVMVDEVHYVSPNTFRNRRAAEQDAARVAFEYISKKTKDDAFL 154

Query: 488 IDQEELNFCKAILKEYADKINAEIPDYKTEKGDG--LGFTSSLTFNGNQYVGDEGRNKKE 315
           + +E+L  CK+IL EY DK+  E P Y T+   G    F S+L F+G  Y  D GR KKE
Sbjct: 155 LLREDLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKE 214

Query: 314 SQHLAARAVIMSI 276
           ++ LAARA I+S+
Sbjct: 215 AEQLAARAAILSL 227


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