BLASTX nr result

ID: Cnidium21_contig00007742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007742
         (783 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38108.3| unnamed protein product [Vitis vinifera]              273   3e-71
ref|XP_002263231.1| PREDICTED: 50S ribosomal protein L18 [Vitis ...   273   3e-71
gb|AFK43033.1| unknown [Lotus japonicus]                              247   2e-63
ref|XP_004150421.1| PREDICTED: 50S ribosomal protein L18-like [C...   243   3e-62
ref|XP_003531827.1| PREDICTED: 50S ribosomal protein L18-like [G...   243   3e-62

>emb|CBI38108.3| unnamed protein product [Vitis vinifera]
          Length = 197

 Score =  273 bits (698), Expect = 3e-71
 Identities = 142/188 (75%), Positives = 158/188 (84%)
 Frame = +2

Query: 62  MAGCLSSPTRPPLILQSSGFLRARGDKPTSISWSSSLPHLNLSINLASHPSNPTRNQSFV 241
           MA   SSP      L S+   ++R  KPTS+SWSSS P++N+  N  ++PS P+ N+  V
Sbjct: 15  MASISSSPC-----LFSTDLFQSRSLKPTSLSWSSSFPNINIFTNSITNPSLPSLNKCLV 69

Query: 242 VQAAWTRRSRSEAEKKPSRKSWKQKTDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVISVA 421
           VQAAWTRRSRSEA K+PSRKSWKQKTDMYMRPFLLNVFFSKRF+HAKVMHR TSKVISVA
Sbjct: 70  VQAAWTRRSRSEAAKRPSRKSWKQKTDMYMRPFLLNVFFSKRFIHAKVMHRPTSKVISVA 129

Query: 422 TTNSKDLRNTLPSLTDTNACRVIGKLIAERSKEADVFAMSYETKKNERIEGRLGIVLDTI 601
           TTNSKDLRNTL SLTD NACRVIGKLIAERS EADVFAMSYE +K+ERIEG+LGIVLDTI
Sbjct: 130 TTNSKDLRNTLSSLTDHNACRVIGKLIAERSMEADVFAMSYEPRKDERIEGKLGIVLDTI 189

Query: 602 KENGIIFV 625
           KENGIIFV
Sbjct: 190 KENGIIFV 197


>ref|XP_002263231.1| PREDICTED: 50S ribosomal protein L18 [Vitis vinifera]
          Length = 183

 Score =  273 bits (698), Expect = 3e-71
 Identities = 142/188 (75%), Positives = 158/188 (84%)
 Frame = +2

Query: 62  MAGCLSSPTRPPLILQSSGFLRARGDKPTSISWSSSLPHLNLSINLASHPSNPTRNQSFV 241
           MA   SSP      L S+   ++R  KPTS+SWSSS P++N+  N  ++PS P+ N+  V
Sbjct: 1   MASISSSPC-----LFSTDLFQSRSLKPTSLSWSSSFPNINIFTNSITNPSLPSLNKCLV 55

Query: 242 VQAAWTRRSRSEAEKKPSRKSWKQKTDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVISVA 421
           VQAAWTRRSRSEA K+PSRKSWKQKTDMYMRPFLLNVFFSKRF+HAKVMHR TSKVISVA
Sbjct: 56  VQAAWTRRSRSEAAKRPSRKSWKQKTDMYMRPFLLNVFFSKRFIHAKVMHRPTSKVISVA 115

Query: 422 TTNSKDLRNTLPSLTDTNACRVIGKLIAERSKEADVFAMSYETKKNERIEGRLGIVLDTI 601
           TTNSKDLRNTL SLTD NACRVIGKLIAERS EADVFAMSYE +K+ERIEG+LGIVLDTI
Sbjct: 116 TTNSKDLRNTLSSLTDHNACRVIGKLIAERSMEADVFAMSYEPRKDERIEGKLGIVLDTI 175

Query: 602 KENGIIFV 625
           KENGIIFV
Sbjct: 176 KENGIIFV 183


>gb|AFK43033.1| unknown [Lotus japonicus]
          Length = 202

 Score =  247 bits (630), Expect = 2e-63
 Identities = 129/194 (66%), Positives = 155/194 (79%), Gaps = 9/194 (4%)
 Frame = +2

Query: 71  CLSSPTRPPLILQSSGFL--RARGDKPTSISWSSSLPHL-NLSINLASHPS------NPT 223
           C++SP+R   +  SS  L  + +  K  S SW SS P L N+S + +  PS      NP+
Sbjct: 9   CVASPSRSACVTLSSQALLPQLQSPKSVSFSWLSSFPTLTNISFSPSPSPSPLLLRTNPS 68

Query: 224 RNQSFVVQAAWTRRSRSEAEKKPSRKSWKQKTDMYMRPFLLNVFFSKRFVHAKVMHRGTS 403
                 V+AAWTRRSR EA K+P+RKSWKQ+TDMYMRPFLLNVFFSKRF+HAKVMHRGTS
Sbjct: 69  LFNGSFVRAAWTRRSRGEAAKRPNRKSWKQRTDMYMRPFLLNVFFSKRFIHAKVMHRGTS 128

Query: 404 KVISVATTNSKDLRNTLPSLTDTNACRVIGKLIAERSKEADVFAMSYETKKNERIEGRLG 583
           KVISVATTNSKDLRN+LPSLTD +ACRV+G+LIA+RSKEADV+A++YE +K+ERIEG+LG
Sbjct: 129 KVISVATTNSKDLRNSLPSLTDHDACRVVGRLIAQRSKEADVYALAYEPRKDERIEGKLG 188

Query: 584 IVLDTIKENGIIFV 625
           IVLDTIKENGIIFV
Sbjct: 189 IVLDTIKENGIIFV 202


>ref|XP_004150421.1| PREDICTED: 50S ribosomal protein L18-like [Cucumis sativus]
          Length = 190

 Score =  243 bits (620), Expect = 3e-62
 Identities = 117/162 (72%), Positives = 142/162 (87%)
 Frame = +2

Query: 140 KPTSISWSSSLPHLNLSINLASHPSNPTRNQSFVVQAAWTRRSRSEAEKKPSRKSWKQKT 319
           K +S+SW+SS PH+++        SN +  +   +Q+AWTRRSR EA K+P++KSWKQ+T
Sbjct: 28  KSSSLSWASSFPHVSIFRGSPFASSNSSYAKVLFIQSAWTRRSREEAAKRPNKKSWKQRT 87

Query: 320 DMYMRPFLLNVFFSKRFVHAKVMHRGTSKVISVATTNSKDLRNTLPSLTDTNACRVIGKL 499
           DMYMRPFLLNVFFSK+F+HAKVMHRGTSKVISVATTN+KDLRN+LPSLTD NACRVIGKL
Sbjct: 88  DMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKL 147

Query: 500 IAERSKEADVFAMSYETKKNERIEGRLGIVLDTIKENGIIFV 625
           IAERSKEADV+A+SYE +K+ERIEG+LGIV+DTIKENGI+FV
Sbjct: 148 IAERSKEADVYAISYEPRKDERIEGKLGIVIDTIKENGIMFV 189


>ref|XP_003531827.1| PREDICTED: 50S ribosomal protein L18-like [Glycine max]
          Length = 197

 Score =  243 bits (620), Expect = 3e-62
 Identities = 126/194 (64%), Positives = 148/194 (76%), Gaps = 4/194 (2%)
 Frame = +2

Query: 56  NSMAGCLSSPTRPPLILQSSGFLRARGDKPTSISWSSSLPHLNLSINLAS----HPSNPT 223
           +S   C S  +  P +  S    R       S SW SS P L LS + +S    +P NP+
Sbjct: 4   SSATACASLSSPLPRLPPSRTRTRTSIPSSFSFSWLSSFPTLTLSASRSSSSGINPPNPS 63

Query: 224 RNQSFVVQAAWTRRSRSEAEKKPSRKSWKQKTDMYMRPFLLNVFFSKRFVHAKVMHRGTS 403
           R+    ++AAWTRRSR EA KKP+RKSWKQ+TDMYMRPFLLNVFFSKRF+HAKV+HRGTS
Sbjct: 64  RSHDSFIRAAWTRRSRGEAAKKPNRKSWKQRTDMYMRPFLLNVFFSKRFIHAKVVHRGTS 123

Query: 404 KVISVATTNSKDLRNTLPSLTDTNACRVIGKLIAERSKEADVFAMSYETKKNERIEGRLG 583
           KVI VATTN+KDLRN+LPSL D NACRV+G LIAERS EADV+A++YE +K+ERIEGRLG
Sbjct: 124 KVICVATTNAKDLRNSLPSLIDHNACRVVGNLIAERSMEADVYAVAYEPRKDERIEGRLG 183

Query: 584 IVLDTIKENGIIFV 625
           IVLDTIKENGIIFV
Sbjct: 184 IVLDTIKENGIIFV 197


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