BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007714
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137159.1| PREDICTED: splicing factor 3B subunit 1-like...   199   5e-49
ref|XP_002284022.1| PREDICTED: splicing factor 3B subunit 1-like...   197   2e-48
ref|XP_002525826.1| Splicing factor 3B subunit, putative [Ricinu...   181   2e-43
emb|CBI32870.3| unnamed protein product [Vitis vinifera]              179   6e-43
ref|XP_001754003.1| predicted protein [Physcomitrella patens sub...   167   2e-39

>ref|XP_004137159.1| PREDICTED: splicing factor 3B subunit 1-like [Cucumis sativus]
           gi|449523197|ref|XP_004168610.1| PREDICTED: splicing
           factor 3B subunit 1-like [Cucumis sativus]
          Length = 1262

 Score =  199 bits (506), Expect = 5e-49
 Identities = 107/160 (66%), Positives = 126/160 (78%)
 Frame = -1

Query: 528 MDAEIAKAQEERKKLEQQLASEQLASLNSVTFDTDLYGGNNPFEGYEKSIPVNEDEENLD 349
           MD EIAK QEER+K+EQQLAS     LNSVTFDTDLYGGN+   GY  SIPVNED+ENL+
Sbjct: 1   MDLEIAKTQEERRKMEQQLAS-----LNSVTFDTDLYGGNDK-AGYVTSIPVNEDDENLE 54

Query: 348 TVDSQVPRRLASYTAPKSIMNDMPRGGDDDEALGFKKPQKIIXXXXXXXXXXXXRVISPE 169
           +  + V R+LASYTAPKS++ +MPRG D+DE LG+KKPQ+II            RVISPE
Sbjct: 55  SQVNVVGRKLASYTAPKSLLKEMPRGVDEDEDLGYKKPQRIIDREDDYRKRRLNRVISPE 114

Query: 168 RHDAFANGDKTPDVSVRTYADVMREEALKRKKEETLKLIA 49
           RHDAFA G+KTPD SVRTYA+VMREEALKR++EETL+ IA
Sbjct: 115 RHDAFAAGEKTPDPSVRTYAEVMREEALKREREETLRAIA 154


>ref|XP_002284022.1| PREDICTED: splicing factor 3B subunit 1-like [Vitis vinifera]
          Length = 1271

 Score =  197 bits (501), Expect = 2e-48
 Identities = 101/160 (63%), Positives = 123/160 (76%)
 Frame = -1

Query: 528 MDAEIAKAQEERKKLEQQLASEQLASLNSVTFDTDLYGGNNPFEGYEKSIPVNEDEENLD 349
           +D EIA+ QEERKK+EQQL+S     L SV +D +LYGG N FE Y  SIPVN++EEN+D
Sbjct: 4   IDPEIARTQEERKKMEQQLSS-----LTSVNYDPELYGGTNKFEDYVSSIPVNDEEENVD 58

Query: 348 TVDSQVPRRLASYTAPKSIMNDMPRGGDDDEALGFKKPQKIIXXXXXXXXXXXXRVISPE 169
            +D  + RRL SYTAP S++ +MPRGG +++ +GFKKPQ+II            RVISP+
Sbjct: 59  AMDPGLGRRLPSYTAPASLLKEMPRGGVEEDDMGFKKPQRIIDREDDYRRRRLNRVISPD 118

Query: 168 RHDAFANGDKTPDVSVRTYADVMREEALKRKKEETLKLIA 49
           RHDAFA+GDKTPDVSVRTYADVMREEALKR+KEETLK IA
Sbjct: 119 RHDAFASGDKTPDVSVRTYADVMREEALKREKEETLKAIA 158


>ref|XP_002525826.1| Splicing factor 3B subunit, putative [Ricinus communis]
           gi|223534831|gb|EEF36520.1| Splicing factor 3B subunit,
           putative [Ricinus communis]
          Length = 1233

 Score =  181 bits (458), Expect = 2e-43
 Identities = 97/160 (60%), Positives = 121/160 (75%)
 Frame = -1

Query: 528 MDAEIAKAQEERKKLEQQLASEQLASLNSVTFDTDLYGGNNPFEGYEKSIPVNEDEENLD 349
           MD EIAK QEER+K+EQ+LAS     L S+TFD DLYGG +  + Y  SIPVN+D++ LD
Sbjct: 1   MDPEIAKTQEERRKMEQELAS-----LTSLTFDKDLYGGTDR-DSYVTSIPVNDDDD-LD 53

Query: 348 TVDSQVPRRLASYTAPKSIMNDMPRGGDDDEALGFKKPQKIIXXXXXXXXXXXXRVISPE 169
             D++V R+LASYTAPKS++ +MPRGGDDD   GFKKP +II            R +SP+
Sbjct: 54  IGDNEVARKLASYTAPKSLLKEMPRGGDDDNDSGFKKPSRIIDREDDYRRRRLNRGLSPD 113

Query: 168 RHDAFANGDKTPDVSVRTYADVMREEALKRKKEETLKLIA 49
           RHDAFA G+KTPD SVR+YA+VM+EEALKR+KEETL+LIA
Sbjct: 114 RHDAFAAGEKTPDPSVRSYAEVMKEEALKREKEETLRLIA 153


>emb|CBI32870.3| unnamed protein product [Vitis vinifera]
          Length = 700

 Score =  179 bits (453), Expect = 6e-43
 Identities = 91/150 (60%), Positives = 112/150 (74%)
 Frame = -1

Query: 528 MDAEIAKAQEERKKLEQQLASEQLASLNSVTFDTDLYGGNNPFEGYEKSIPVNEDEENLD 349
           +D EIA+ QEERKK+EQQL+S     L SV +D +LYGG N FE Y  SIPVN++EEN+D
Sbjct: 4   IDPEIARTQEERKKMEQQLSS-----LTSVNYDPELYGGTNKFEDYVSSIPVNDEEENVD 58

Query: 348 TVDSQVPRRLASYTAPKSIMNDMPRGGDDDEALGFKKPQKIIXXXXXXXXXXXXRVISPE 169
            +D  + RRL SYTAP S++ +MPRGG +++ +GFKKPQ+II            RVISP+
Sbjct: 59  AMDPGLGRRLPSYTAPASLLKEMPRGGVEEDDMGFKKPQRIIDREDDYRRRRLNRVISPD 118

Query: 168 RHDAFANGDKTPDVSVRTYADVMREEALKR 79
           RHDAFA+GDKTPDVSVRTYADVMREEA  R
Sbjct: 119 RHDAFASGDKTPDVSVRTYADVMREEARNR 148


>ref|XP_001754003.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162694979|gb|EDQ81325.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 1292

 Score =  167 bits (423), Expect = 2e-39
 Identities = 87/158 (55%), Positives = 114/158 (72%), Gaps = 1/158 (0%)
 Frame = -1

Query: 519 EIAKAQEERKKLEQQLASEQLASLNSVTFDTDLYGGNNPFEGYEKSIPVNEDE-ENLDTV 343
           EIA+ QEER+K E +LA      + S++FD DLYG +N FEGYE+SI +N+D+ E  D  
Sbjct: 8   EIARVQEERRKHEAELAK-----MTSLSFDKDLYGESNRFEGYERSIALNDDDDEPQDAT 62

Query: 342 DSQVPRRLASYTAPKSIMNDMPRGGDDDEALGFKKPQKIIXXXXXXXXXXXXRVISPERH 163
           + +V ++LASYTAPK+++ND+PRG   D+ +GFKKP +II            R+ISPERH
Sbjct: 63  EREVAKKLASYTAPKNLINDIPRGEVVDDGIGFKKPSRIIDREDDYRRQRLNRIISPERH 122

Query: 162 DAFANGDKTPDVSVRTYADVMREEALKRKKEETLKLIA 49
           DAFA GD TPD  VRTYAD+M+EE  +R+KEETLKLIA
Sbjct: 123 DAFAMGDATPDERVRTYADIMKEERTRREKEETLKLIA 160