BLASTX nr result

ID: Cnidium21_contig00007701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007701
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534427.1| DNA-binding protein RAV1, putative [Ricinus ...   112   6e-23
ref|XP_002276492.1| PREDICTED: AP2/ERF and B3 domain-containing ...   111   1e-22
ref|XP_002304025.1| AP2 domain-containing transcription factor [...   100   3e-19
ref|XP_002529958.1| DNA binding protein, putative [Ricinus commu...   100   4e-19
ref|NP_175524.1| RAV-like factor [Arabidopsis thaliana] gi|75268...    98   1e-18

>ref|XP_002534427.1| DNA-binding protein RAV1, putative [Ricinus communis]
           gi|223525312|gb|EEF27956.1| DNA-binding protein RAV1,
           putative [Ricinus communis]
          Length = 349

 Score =  112 bits (280), Expect = 6e-23
 Identities = 50/108 (46%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
 Frame = -3

Query: 644 TDIGKADKLVIPKIFA-GCFPSISDGDESSLEERPVNDVELGFYDQSMTLWKFRYCHWRK 468
           +D+GK ++LVIPK FA   F  IS+  E ++     ND +L FYD++M LWKFRYC+W+ 
Sbjct: 176 SDVGKLNRLVIPKRFAIKFFSHISESVEQNIGGNKANDGQLAFYDKAMKLWKFRYCYWKS 235

Query: 467 SKTYSLSRGWRKFVEEKGLSSKDEVIFFKCECVEGTSIVDTHYMIDVE 324
           S++Y  +RGW +FV+EK L + D +    CEC E   + D++YMIDV+
Sbjct: 236 SQSYVFTRGWNRFVKEKQLKANDTIAICLCECRENAELTDSYYMIDVK 283


>ref|XP_002276492.1| PREDICTED: AP2/ERF and B3 domain-containing transcription factor
           At1g51120-like [Vitis vinifera]
          Length = 357

 Score =  111 bits (278), Expect = 1e-22
 Identities = 66/182 (36%), Positives = 97/182 (53%), Gaps = 2/182 (1%)
 Frame = -3

Query: 644 TDIGKADKLVIPKIFAGC-FPSISDGDESSLEERPVNDVELGFYDQSMTLWKFRYCHWRK 468
           +D+GK ++LVIPK +A   FP IS+  E +       D++L FYD+ M LWKFRYC+WR 
Sbjct: 176 SDVGKLNRLVIPKKYATKHFPPISESAEENEVGGAAADMQLVFYDRLMRLWKFRYCYWRS 235

Query: 467 SKTYSLSRGWRKFVEEKGLSSKDEVIFFKCECVEGTSIVDTHYMIDVEYANKVQVEEVGG 288
           S++Y  +RGW +FV++K L+  D V F+ CE  +GT    T  MIDV Y       +   
Sbjct: 236 SQSYVFTRGWNRFVKDKELNENDIVTFYLCEYGQGTKEGRTFCMIDVAYDRSTDGRDANN 295

Query: 287 NTXXXXXXXXXXXVQNLQNEENAGGIADVRHVRKIQADKDLEGAGSG-KAPEKSLMLFGV 111
            +              LQ ++    I   +H RK Q +++  G     +  +K L LFGV
Sbjct: 296 GSFVEGPNRYVGLQIELQ-QDLKQNIGYNKHERKSQEEEESVGTEPALEGQKKGLRLFGV 354

Query: 110 KI 105
           +I
Sbjct: 355 QI 356


>ref|XP_002304025.1| AP2 domain-containing transcription factor [Populus trichocarpa]
           gi|222841457|gb|EEE79004.1| AP2 domain-containing
           transcription factor [Populus trichocarpa]
          Length = 369

 Score =  100 bits (248), Expect = 3e-19
 Identities = 66/190 (34%), Positives = 99/190 (52%), Gaps = 10/190 (5%)
 Frame = -3

Query: 644 TDIGKADKLVIPKIFA-GCFPSISDG--DESSLEERPVNDVELGFYDQSMTLWKFRYCHW 474
           +D+GK ++LVIPK FA   FP+I     D+  L    V+D EL FYD+ M  WKFRYC+W
Sbjct: 176 SDVGKLNRLVIPKKFAVKYFPNIFKDVEDDRVLNAAGVDDTELIFYDRFMKSWKFRYCYW 235

Query: 473 RKSKTYSLSRGWRKFVEEKGLSSKDEVIFFKCECVEGTSIVDTH------YMIDVEYANK 312
           R S+++  ++GW +FV+EK L  KD +IF+ C C     +++ H       MIDV Y N 
Sbjct: 236 RSSQSFVFTKGWNRFVKEKKLKEKDIIIFYTCAC--PNKVLEQHGQGQYFSMIDVVYCNG 293

Query: 311 VQVEEVGGN-TXXXXXXXXXXXVQNLQNEENAGGIADVRHVRKIQADKDLEGAGSGKAPE 135
              +  G N T            QN++ +    G       ++++ +K+       K  +
Sbjct: 294 QGGKVDGFNQTEDVQRELAVVLRQNMRKKLQKDG-------KELKEEKE---TLKNKVKQ 343

Query: 134 KSLMLFGVKI 105
           K   LFGV+I
Sbjct: 344 KGFRLFGVQI 353


>ref|XP_002529958.1| DNA binding protein, putative [Ricinus communis]
           gi|223530556|gb|EEF32435.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 374

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 69/199 (34%), Positives = 102/199 (51%), Gaps = 19/199 (9%)
 Frame = -3

Query: 644 TDIGKADKLVIPKIFA-GCFPSIS-DGDESSLEERP--------VNDVELGFYDQSMTLW 495
           +D+GK ++LVIPK FA   FP IS +G+E   EE          ++D+EL FYD+ M  W
Sbjct: 185 SDVGKLNRLVIPKKFAVKYFPYISGNGEEEGEEEEEKVVGAPSVLDDIELVFYDRLMKCW 244

Query: 494 KFRYCHWRKSKTYSLSRGWRKFVEEKGLSSKDEVIFFKCECVEGTSIVDTHY-MIDVEYA 318
           KFRYC+WR S+++  +RGW +FV+EK L  KD + F+ C   +       ++ +ID+ Y+
Sbjct: 245 KFRYCYWRSSQSFVFTRGWNRFVKEKNLKEKDIITFYACASPDNRVQEGQNFSLIDISYS 304

Query: 317 NKVQVEEVGGN-----TXXXXXXXXXXXVQNLQNEENAGGIADVRHVRKIQADKDLEGA- 156
           N  QV   G N                  + LQ ++          V++I   K+LE   
Sbjct: 305 NG-QVVVDGNNQMEEMQKELELRLGHTIRRRLQKDD---------RVKEINGLKELESKN 354

Query: 155 --GSGKAPEKSLMLFGVKI 105
              + K   K L LFGV+I
Sbjct: 355 NNNNNKMKGKGLRLFGVRI 373


>ref|NP_175524.1| RAV-like factor [Arabidopsis thaliana]
           gi|75268188|sp|Q9C688.1|RAVL3_ARATH RecName:
           Full=AP2/ERF and B3 domain-containing transcription
           factor At1g51120; AltName: Full=RAV1-like
           ethylene-responsive transcription factor At1g51120
           gi|12320776|gb|AAG50531.1|AC079828_2 DNA-binding protein
           RAV1, putative [Arabidopsis thaliana]
           gi|48479358|gb|AAT44950.1| putative AP2/EREBP
           transcription factor [Arabidopsis thaliana]
           gi|332194503|gb|AEE32624.1| RAV-like factor [Arabidopsis
           thaliana]
          Length = 352

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 47/113 (41%), Positives = 69/113 (61%), Gaps = 5/113 (4%)
 Frame = -3

Query: 644 TDIGKADKLVIPKIFAGCF-PSISDGDESSLEERPVNDVELGFYDQSMTLWKFRYCHWRK 468
           +D+GK ++LVIPK +A  + P ISD          V DVE+ FYD++M  WKFRYC+WR 
Sbjct: 185 SDVGKLNRLVIPKKYAVKYMPFISDDQSEKETSEGVEDVEVVFYDRAMRQWKFRYCYWRS 244

Query: 467 SKTYSLSRGWRKFVEEKGLSSKDEVIFFKCECVEGTSIVD----THYMIDVEY 321
           S+++  +RGW  FV+EK L  KD ++F+ C+       ++    T  MIDV +
Sbjct: 245 SQSFVFTRGWNGFVKEKNLKEKDIIVFYTCDVPNNVKTLEGQSKTFLMIDVHH 297


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