BLASTX nr result

ID: Cnidium21_contig00007671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007671
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146980.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   139   2e-31
ref|XP_002278267.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   136   2e-30
ref|XP_002520726.1| potassium channel regulatory factor, putativ...   135   4e-30
ref|XP_002307588.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-29
gb|ACJ84802.1| unknown [Medicago truncatula]                          130   1e-28

>ref|XP_004146980.1| PREDICTED: pre-mRNA-splicing factor 18-like [Cucumis sativus]
           gi|449491488|ref|XP_004158914.1| PREDICTED:
           pre-mRNA-splicing factor 18-like [Cucumis sativus]
          Length = 420

 Score =  139 bits (351), Expect = 2e-31
 Identities = 79/151 (52%), Positives = 101/151 (66%), Gaps = 9/151 (5%)
 Frame = +1

Query: 76  MEMLKEELQRQRKALSEQTGGKRIFNRSELEKKKIQLLR---RWEAEQKLLRQXXXXXXX 246
           M++LK+EL ++R+AL+ +TGGKR+F RSE+E+++IQ LR   + E E K LRQ       
Sbjct: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60

Query: 247 XXXXXXXXXXXXXXXXKTRPDS------TSTSKPLTDEEKIEILNLPKQEVIRRLRFLKQ 408
                            T   S      T+TSK LTDE+ I+ L LP+QEVIRRLRFLKQ
Sbjct: 61  AEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120

Query: 409 PITLFGEDDEARLSRMKYVLKAGLFEVDDDM 501
           PITLFGEDD+ARL R+K+VLKAGLFEVD D+
Sbjct: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDL 151


>ref|XP_002278267.1| PREDICTED: pre-mRNA-splicing factor 18-like [Vitis vinifera]
          Length = 412

 Score =  136 bits (343), Expect = 2e-30
 Identities = 78/146 (53%), Positives = 99/146 (67%), Gaps = 4/146 (2%)
 Frame = +1

Query: 76  MEMLKEELQRQRKALSEQTGGKRIFNRSELEKKKIQLLR---RWEAEQKLLRQXXXXXXX 246
           M++LK+EL ++R++L+++ GGKR F RSE+E++ IQ LR   + E E K LR        
Sbjct: 1   MDLLKQELLKKRQSLAQEAGGKRFFKRSEIEQRNIQKLREQEKRELEAKALRHNNGTASS 60

Query: 247 XXXXXXXXXXXXXXXXKTRPDSTSTS-KPLTDEEKIEILNLPKQEVIRRLRFLKQPITLF 423
                           K  PD TS+S K +TDE+KI+ + LPKQEVIRRLRFLKQPITLF
Sbjct: 61  STAAAASATSTPSSDAK--PDLTSSSSKAITDEQKIDEMVLPKQEVIRRLRFLKQPITLF 118

Query: 424 GEDDEARLSRMKYVLKAGLFEVDDDM 501
           GEDD ARL R+KYVLKAG+FEVD DM
Sbjct: 119 GEDDTARLDRLKYVLKAGIFEVDSDM 144


>ref|XP_002520726.1| potassium channel regulatory factor, putative [Ricinus communis]
           gi|223540111|gb|EEF41688.1| potassium channel regulatory
           factor, putative [Ricinus communis]
          Length = 417

 Score =  135 bits (339), Expect = 4e-30
 Identities = 76/147 (51%), Positives = 99/147 (67%), Gaps = 5/147 (3%)
 Frame = +1

Query: 76  MEMLKEELQRQRKALSEQTGGKRIFNRSELEKKKIQLLR---RWEAEQKLLRQXXXXXXX 246
           M++LK+EL ++R++L++ TGGKR+F RSE+++K+IQ LR   + E E K  RQ       
Sbjct: 1   MDLLKQELLKKRQSLAQDTGGKRVFKRSEIQQKEIQKLREQEKQELEAKAKRQSSSTETA 60

Query: 247 XXXXXXXXXXXXXXXXKTRPDSTS--TSKPLTDEEKIEILNLPKQEVIRRLRFLKQPITL 420
                            T   S +  TSK LT+E+ I+ L LPKQEVIRRLRFLKQPITL
Sbjct: 61  TTTTSTSSTANTPSTTTTTTTSAAATTSKSLTNEQNIDNLILPKQEVIRRLRFLKQPITL 120

Query: 421 FGEDDEARLSRMKYVLKAGLFEVDDDM 501
           FGEDD+ARL R+K+VLKAG+FEVD DM
Sbjct: 121 FGEDDDARLDRLKHVLKAGIFEVDSDM 147


>ref|XP_002307588.1| predicted protein [Populus trichocarpa] gi|222857037|gb|EEE94584.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score =  132 bits (332), Expect = 3e-29
 Identities = 76/151 (50%), Positives = 96/151 (63%), Gaps = 9/151 (5%)
 Frame = +1

Query: 76  MEMLKEELQRQRKALSEQTGGKRIFNRSELEKKKIQLLR---RWEAEQKLLRQXXXXXXX 246
           M++LK+EL ++R+ L++ TGGK+ F RSE+++K+IQ LR   + E E K  RQ       
Sbjct: 1   MDLLKQELLKKRQTLAQDTGGKKFFKRSEIQQKEIQKLREQEKRELEAKSKRQSSSSSIT 60

Query: 247 XXXXXXXXXXXXXXXX------KTRPDSTSTSKPLTDEEKIEILNLPKQEVIRRLRFLKQ 408
                                 K    + +TSKPLT E+ I+ L LPKQEVIRR RFLKQ
Sbjct: 61  SSSTTTTPNSSVAASTATTTTTKNSSSTATTSKPLTVEQNIDNLVLPKQEVIRRFRFLKQ 120

Query: 409 PITLFGEDDEARLSRMKYVLKAGLFEVDDDM 501
           PITLFGEDD+ARL R+KYVLKAGLFEVD DM
Sbjct: 121 PITLFGEDDDARLDRLKYVLKAGLFEVDSDM 151


>gb|ACJ84802.1| unknown [Medicago truncatula]
          Length = 268

 Score =  130 bits (327), Expect = 1e-28
 Identities = 69/142 (48%), Positives = 91/142 (64%)
 Frame = +1

Query: 76  MEMLKEELQRQRKALSEQTGGKRIFNRSELEKKKIQLLRRWEAEQKLLRQXXXXXXXXXX 255
           M++LK+EL ++R++L+E+TGGK+ F RSE+++K+IQ LR  E  +   +           
Sbjct: 1   MDLLKQELLKKRQSLAEETGGKKFFKRSEIQQKQIQKLREEEKRELEAKSKKRNSTTSDT 60

Query: 256 XXXXXXXXXXXXXKTRPDSTSTSKPLTDEEKIEILNLPKQEVIRRLRFLKQPITLFGEDD 435
                             + S+S  L DE+ I  L LPKQEVIRRLRFLKQP+TLFGEDD
Sbjct: 61  VSTVTTSSTNASSSVTSAAASSSASLPDEQNIGSLVLPKQEVIRRLRFLKQPVTLFGEDD 120

Query: 436 EARLSRMKYVLKAGLFEVDDDM 501
           + RL R+KYVLKAGLFEVD DM
Sbjct: 121 DVRLDRLKYVLKAGLFEVDSDM 142


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