BLASTX nr result

ID: Cnidium21_contig00007665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007665
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270438.1| PREDICTED: dynein 8 kDa light chain, flagell...   158   7e-37
ref|XP_002328627.1| predicted protein [Populus trichocarpa] gi|1...   157   1e-36
ref|XP_002870199.1| At4g15930 [Arabidopsis lyrata subsp. lyrata]...   157   2e-36
ref|NP_193328.4| dynein light chain LC8-type [Arabidopsis thalia...   157   2e-36
ref|XP_003533298.1| PREDICTED: dynein light chain 2, cytoplasmic...   155   5e-36

>ref|XP_002270438.1| PREDICTED: dynein 8 kDa light chain, flagellar outer arm [Vitis
           vinifera] gi|147857576|emb|CAN81003.1| hypothetical
           protein VITISV_006994 [Vitis vinifera]
          Length = 117

 Score =  158 bits (400), Expect = 7e-37
 Identities = 80/118 (67%), Positives = 92/118 (77%)
 Frame = -2

Query: 577 EKEKSYDAMSEAAKTNGDDRNSRPXXXXXXAGKKVIIKSADMKDDLQTVAINIAIDAFEK 398
           E  K   A++ + K + DDR          A K+VIIKSADMKDD+Q  AI+IAI A E 
Sbjct: 3   EDLKRNGALALSLKQSSDDRK---LSLAASASKRVIIKSADMKDDMQKEAIDIAIAASEN 59

Query: 397 HSVEKDVAEYIKKEFDKKHGPTWHCIVGKNFGSFVTHETNHFIYFYLDTKAVLLFKSG 224
           HSVEK++AEYIKKEFDKKHGPTWHCIVG+NFGS+VTHETNHF+YFYLD KAVLLFKSG
Sbjct: 60  HSVEKNIAEYIKKEFDKKHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 117


>ref|XP_002328627.1| predicted protein [Populus trichocarpa] gi|118482080|gb|ABK92971.1|
           unknown [Populus trichocarpa]
           gi|222838609|gb|EEE76974.1| predicted protein [Populus
           trichocarpa]
          Length = 120

 Score =  157 bits (398), Expect = 1e-36
 Identities = 71/87 (81%), Positives = 83/87 (95%)
 Frame = -2

Query: 484 GKKVIIKSADMKDDLQTVAINIAIDAFEKHSVEKDVAEYIKKEFDKKHGPTWHCIVGKNF 305
           GKK+IIK+ADMKDD+Q  A++IAI AFE+++VEKDVAE+IKKEFDKKHGPTWHCIVG+NF
Sbjct: 34  GKKIIIKNADMKDDMQKEAVDIAIAAFERNNVEKDVAEHIKKEFDKKHGPTWHCIVGRNF 93

Query: 304 GSFVTHETNHFIYFYLDTKAVLLFKSG 224
           GS+VTHETNHF+YFYLD KAVLLFKSG
Sbjct: 94  GSYVTHETNHFVYFYLDQKAVLLFKSG 120


>ref|XP_002870199.1| At4g15930 [Arabidopsis lyrata subsp. lyrata]
           gi|297316035|gb|EFH46458.1| At4g15930 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 123

 Score =  157 bits (397), Expect = 2e-36
 Identities = 77/118 (65%), Positives = 93/118 (78%), Gaps = 1/118 (0%)
 Frame = -2

Query: 574 KEKSYDAMSEAAKTNGDDRNSRPXXXXXXA-GKKVIIKSADMKDDLQTVAINIAIDAFEK 398
           ++KS +  + A   + D R+S P        GK+ +IKSADMKDD+Q  AI+IAI AFEK
Sbjct: 6   RKKSVNGGAPAQTISDDRRSSLPEVEASPPAGKRAVIKSADMKDDMQKEAIDIAISAFEK 65

Query: 397 HSVEKDVAEYIKKEFDKKHGPTWHCIVGKNFGSFVTHETNHFIYFYLDTKAVLLFKSG 224
           +SVEKD+AE IKKEFDKKHG TWHCIVG+NFGS+VTHETNHF+YFYL+ KAVLLFKSG
Sbjct: 66  YSVEKDIAENIKKEFDKKHGATWHCIVGRNFGSYVTHETNHFVYFYLEQKAVLLFKSG 123


>ref|NP_193328.4| dynein light chain LC8-type [Arabidopsis thaliana]
           gi|28466885|gb|AAO44051.1| At4g15930 [Arabidopsis
           thaliana] gi|332658267|gb|AEE83667.1| dynein light chain
           LC8-type [Arabidopsis thaliana]
          Length = 123

 Score =  157 bits (396), Expect = 2e-36
 Identities = 78/118 (66%), Positives = 91/118 (77%), Gaps = 1/118 (0%)
 Frame = -2

Query: 574 KEKSYDAMSEAAKTNGDDRNSRPXXXXXXA-GKKVIIKSADMKDDLQTVAINIAIDAFEK 398
           ++KS +  + A     D R+S P        GK+ +IKSADMKDD+Q  AI IAI AFEK
Sbjct: 6   RKKSVNGGAPAQTILDDRRSSLPEVEASPPAGKRAVIKSADMKDDMQKEAIEIAISAFEK 65

Query: 397 HSVEKDVAEYIKKEFDKKHGPTWHCIVGKNFGSFVTHETNHFIYFYLDTKAVLLFKSG 224
           +SVEKD+AE IKKEFDKKHG TWHCIVG+NFGS+VTHETNHF+YFYLD KAVLLFKSG
Sbjct: 66  YSVEKDIAENIKKEFDKKHGATWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 123


>ref|XP_003533298.1| PREDICTED: dynein light chain 2, cytoplasmic-like [Glycine max]
          Length = 157

 Score =  155 bits (393), Expect = 5e-36
 Identities = 82/138 (59%), Positives = 100/138 (72%), Gaps = 8/138 (5%)
 Frame = -2

Query: 613 KNLPHYQFPVKK-EKEKSYDAMSE-----AAKTNGDDRNSRPXXXXXXA--GKKVIIKSA 458
           + L H+Q   ++ E++ S DA         A+ N DD+   P      A   KKVIIKSA
Sbjct: 20  QKLTHHQSSFRETERKMSEDAKKNIAGALTARPNSDDQKPSPLPSPAPAVPPKKVIIKSA 79

Query: 457 DMKDDLQTVAINIAIDAFEKHSVEKDVAEYIKKEFDKKHGPTWHCIVGKNFGSFVTHETN 278
           DM  D+Q  A++IA+ AFEK++VEKDVAE IKKEFDK+HGPTWHCIVG+NFGS+VTHETN
Sbjct: 80  DMIPDMQKEAVDIAVAAFEKYNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGSYVTHETN 139

Query: 277 HFIYFYLDTKAVLLFKSG 224
           HF+YFYLD KAVLLFKSG
Sbjct: 140 HFVYFYLDQKAVLLFKSG 157


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