BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007634
         (3032 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29879.3| unnamed protein product [Vitis vinifera]             1058   0.0  
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...  1058   0.0  
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   970   0.0  
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub...   967   0.0  
ref|XP_003537204.1| PREDICTED: DNA-directed RNA polymerase I sub...   924   0.0  

>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score = 1058 bits (2735), Expect = 0.0
 Identities = 562/1001 (56%), Positives = 697/1001 (69%), Gaps = 41/1001 (4%)
 Frame = +2

Query: 8    LQPVLPAVWKPKPLWTGKQVITSLLNHLTRGCKPCTLENEGKIPYQYFSRDSGNNRPSKD 187
            +QP+LPA+WKP+PLW+GKQVIT++LNH+TRG KP T E +GKIP +YF  +    +  K 
Sbjct: 696  MQPLLPAIWKPEPLWSGKQVITAVLNHITRGRKPFTTEKDGKIPREYFGSEIDEKKSGKG 755

Query: 188  EEAGA-------------ENKLLIRRNELVRGVIDKAQFGKYGLVHTVQELYGSDTAGVL 328
            ++ G+             E KLLI +NELVRGVIDKAQF KYGLVH VQELYGS+TAG+L
Sbjct: 756  KDPGSDRRKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGIL 815

Query: 329  LSALSRLFTCFLQMHGFTCGVDDLILLPQYDVQRKXXXXXXXXXXXX-HCDFVNFKRGKI 505
            LS LSRLFT FLQMHGFTCGVDDL++ P YD+ RK             HC F+    GKI
Sbjct: 816  LSVLSRLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNHGKI 875

Query: 506  GPKELQYEIEKVMRNNGESAVARLDGKMKNELREKGSKINKELLLNGLYKPFPKNCISLM 685
             P +LQ E+EK++ +NGE+A+ RLD  MKNEL E  SK+NK+LLL GL KPFPKNC+SLM
Sbjct: 876  DPVKLQVEVEKIILSNGEAAITRLDRMMKNELNELTSKVNKDLLLKGLVKPFPKNCLSLM 935

Query: 686  TISGAKGSSVNFQQISSSLGQQELEGKRVPRMTSGKTLPSFSPWDFSSRAGGYITDRFLT 865
            T +GAKGS+VNF QISS LGQQ+LEGKRVPRM SGKTLP F PWD ++RAGG+I+DRFLT
Sbjct: 936  TTTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDRFLT 995

Query: 866  GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKNLECLKVCYDYTVRDADGSIVQF 1045
            GL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLECLKVCYDYTVRD+DGSIVQF
Sbjct: 996  GLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDGSIVQF 1055

Query: 1046 CYGEDGVDVHQTSFLNKFEALAKNREIIGQKFHHKLEYNAYIKKLPNKLKERVDELTNIE 1225
             YG+DGVDVHQTSF+ +FEALA N E++ +KF    ++N YI+KLP +L+++  +   IE
Sbjct: 1056 NYGDDGVDVHQTSFITEFEALAVNEEVVCEKFGQDGKFNGYIQKLPKELRKKTKKF--IE 1113

Query: 1226 G-----QSSSEELKQRDLLMLMKQKYLSSLAQPGEPVGVIAAQSVGEPSTQMTLNTFHLA 1390
            G     Q      KQ+D + L+KQKY+SSLAQPGEPVGV+AAQSVGEPSTQMTLNTFHLA
Sbjct: 1114 GFMEERQDFDNMKKQKDFVNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLA 1173

Query: 1391 GRGEMNVTLGIPRLQEILMTATNEIKTPIVTCRLLEGKSXXXXXXXXXXXXXXXXXXIIE 1570
            GRGE+NVTLGIPRLQEILMTA N+IKTPI+TC L  G+S                  I E
Sbjct: 1174 GRGEVNVTLGIPRLQEILMTAANDIKTPIMTCPLQMGRSKDDAERLAAKLKKVTVADITE 1233

Query: 1571 SVEICVVPLYIYKDQICRLYKIKIKIKK------HELVSKEDCQETLEVMFLRELEDAIE 1732
            S+E+ +VP  +   Q C +YK+K+K+ +      H  +S EDC+ETLE +F+RELEDAI+
Sbjct: 1234 SMEVSIVPFTVQDHQTCSIYKLKMKLYEPALYPPHTGISLEDCEETLEAVFVRELEDAIQ 1293

Query: 1733 NHVSLLSRISGIKDFTENIESTSASETGDAVSGN---KSQXXXXXXXXXXXXXXXXXXXA 1903
            NH+ LLS+ISGIK+F  +  S ++ ET +  SG+                         A
Sbjct: 1294 NHLLLLSKISGIKNFLPDSRSMASKETDEDASGDGLAGGNGDEDDDGEDDGGAEDLGLDA 1353

Query: 1904 QKRKRQASDEIDYEDGIDGKSNEVELTELXXXXXXXXXXXXXXXXXXXGHVEDVD-VEDE 2080
            QKRK+QASDE+DY D  +G+ +E E                       G  E++D VEDE
Sbjct: 1354 QKRKQQASDEMDYGDS-EGEPDEGE--------------------PSAGLTEEIDLVEDE 1392

Query: 2081 PSNKSHDKGLITEP------------TSTDXXXXXXXXXXXRGALVRKDSDRSCFVKTKG 2224
                ++++  I++P            +S +           R   ++KD DR+  VK KG
Sbjct: 1393 VEISNNEEVGISDPKDEDSKVPSKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAILVKAKG 1452

Query: 2225 QHYEVHFRFINEPHILLSQIVQKVAKKVPLSGSGKIEHCQQLSYDVLEKQVLWXXXXXXX 2404
             ++EVHFRF NEPHILL+QI QK A KV +  SGKI+ CQ +  D  + QV++       
Sbjct: 1453 TYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVI--DCNKDQVIYYGRDPKK 1510

Query: 2405 XXXXXXXQKDLSNLCALKAAGVNITALWEMQDVLDVNHIYSNNIHLMLKTYGVEVARKTI 2584
                   +K    L AL+ AGV+ TA W+MQD LDV ++YSNN+H ML T+GVE AR TI
Sbjct: 1511 RENIPGEEK--KKLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATI 1568

Query: 2585 IKEVQDVFKIYGVEIDYRHLSLIADYMTHSGEYRPMSRHGMISESLSPLMKMSFETPSKF 2764
            IKEV +VF  YGV+++ RHLSLIAD+MTHSG YRPM+RHG I+ES+SP  KM+FET SKF
Sbjct: 1569 IKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKF 1628

Query: 2765 IVEAASHGLTDNLETPSARICLGLPVKLGTGSFDLMQNLQI 2887
            IVEAASHG+TDNLE+ SARICLGLPVK+GTG FDLMQ ++I
Sbjct: 1629 IVEAASHGMTDNLESASARICLGLPVKMGTGCFDLMQKIEI 1669


>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score = 1058 bits (2735), Expect = 0.0
 Identities = 562/1001 (56%), Positives = 697/1001 (69%), Gaps = 41/1001 (4%)
 Frame = +2

Query: 8    LQPVLPAVWKPKPLWTGKQVITSLLNHLTRGCKPCTLENEGKIPYQYFSRDSGNNRPSKD 187
            +QP+LPA+WKP+PLW+GKQVIT++LNH+TRG KP T E +GKIP +YF  +    +  K 
Sbjct: 767  MQPLLPAIWKPEPLWSGKQVITAVLNHITRGRKPFTTEKDGKIPREYFGSEIDEKKSGKG 826

Query: 188  EEAGA-------------ENKLLIRRNELVRGVIDKAQFGKYGLVHTVQELYGSDTAGVL 328
            ++ G+             E KLLI +NELVRGVIDKAQF KYGLVH VQELYGS+TAG+L
Sbjct: 827  KDPGSDRRKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGIL 886

Query: 329  LSALSRLFTCFLQMHGFTCGVDDLILLPQYDVQRKXXXXXXXXXXXX-HCDFVNFKRGKI 505
            LS LSRLFT FLQMHGFTCGVDDL++ P YD+ RK             HC F+    GKI
Sbjct: 887  LSVLSRLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNHGKI 946

Query: 506  GPKELQYEIEKVMRNNGESAVARLDGKMKNELREKGSKINKELLLNGLYKPFPKNCISLM 685
             P +LQ E+EK++ +NGE+A+ RLD  MKNEL E  SK+NK+LLL GL KPFPKNC+SLM
Sbjct: 947  DPVKLQVEVEKIILSNGEAAITRLDRMMKNELNELTSKVNKDLLLKGLVKPFPKNCLSLM 1006

Query: 686  TISGAKGSSVNFQQISSSLGQQELEGKRVPRMTSGKTLPSFSPWDFSSRAGGYITDRFLT 865
            T +GAKGS+VNF QISS LGQQ+LEGKRVPRM SGKTLP F PWD ++RAGG+I+DRFLT
Sbjct: 1007 TTTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDRFLT 1066

Query: 866  GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKNLECLKVCYDYTVRDADGSIVQF 1045
            GL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLECLKVCYDYTVRD+DGSIVQF
Sbjct: 1067 GLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDGSIVQF 1126

Query: 1046 CYGEDGVDVHQTSFLNKFEALAKNREIIGQKFHHKLEYNAYIKKLPNKLKERVDELTNIE 1225
             YG+DGVDVHQTSF+ +FEALA N E++ +KF    ++N YI+KLP +L+++  +   IE
Sbjct: 1127 NYGDDGVDVHQTSFITEFEALAVNEEVVCEKFGQDGKFNGYIQKLPKELRKKTKKF--IE 1184

Query: 1226 G-----QSSSEELKQRDLLMLMKQKYLSSLAQPGEPVGVIAAQSVGEPSTQMTLNTFHLA 1390
            G     Q      KQ+D + L+KQKY+SSLAQPGEPVGV+AAQSVGEPSTQMTLNTFHLA
Sbjct: 1185 GFMEERQDFDNMKKQKDFVNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLA 1244

Query: 1391 GRGEMNVTLGIPRLQEILMTATNEIKTPIVTCRLLEGKSXXXXXXXXXXXXXXXXXXIIE 1570
            GRGE+NVTLGIPRLQEILMTA N+IKTPI+TC L  G+S                  I E
Sbjct: 1245 GRGEVNVTLGIPRLQEILMTAANDIKTPIMTCPLQMGRSKDDAERLAAKLKKVTVADITE 1304

Query: 1571 SVEICVVPLYIYKDQICRLYKIKIKIKK------HELVSKEDCQETLEVMFLRELEDAIE 1732
            S+E+ +VP  +   Q C +YK+K+K+ +      H  +S EDC+ETLE +F+RELEDAI+
Sbjct: 1305 SMEVSIVPFTVQDHQTCSIYKLKMKLYEPALYPPHTGISLEDCEETLEAVFVRELEDAIQ 1364

Query: 1733 NHVSLLSRISGIKDFTENIESTSASETGDAVSGN---KSQXXXXXXXXXXXXXXXXXXXA 1903
            NH+ LLS+ISGIK+F  +  S ++ ET +  SG+                         A
Sbjct: 1365 NHLLLLSKISGIKNFLPDSRSMASKETDEDASGDGLAGGNGDEDDDGEDDGGAEDLGLDA 1424

Query: 1904 QKRKRQASDEIDYEDGIDGKSNEVELTELXXXXXXXXXXXXXXXXXXXGHVEDVD-VEDE 2080
            QKRK+QASDE+DY D  +G+ +E E                       G  E++D VEDE
Sbjct: 1425 QKRKQQASDEMDYGDS-EGEPDEGE--------------------PSAGLTEEIDLVEDE 1463

Query: 2081 PSNKSHDKGLITEP------------TSTDXXXXXXXXXXXRGALVRKDSDRSCFVKTKG 2224
                ++++  I++P            +S +           R   ++KD DR+  VK KG
Sbjct: 1464 VEISNNEEVGISDPKDEDSKVPSKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAILVKAKG 1523

Query: 2225 QHYEVHFRFINEPHILLSQIVQKVAKKVPLSGSGKIEHCQQLSYDVLEKQVLWXXXXXXX 2404
             ++EVHFRF NEPHILL+QI QK A KV +  SGKI+ CQ +  D  + QV++       
Sbjct: 1524 TYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVI--DCNKDQVIYYGRDPKK 1581

Query: 2405 XXXXXXXQKDLSNLCALKAAGVNITALWEMQDVLDVNHIYSNNIHLMLKTYGVEVARKTI 2584
                   +K    L AL+ AGV+ TA W+MQD LDV ++YSNN+H ML T+GVE AR TI
Sbjct: 1582 RENIPGEEK--KKLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATI 1639

Query: 2585 IKEVQDVFKIYGVEIDYRHLSLIADYMTHSGEYRPMSRHGMISESLSPLMKMSFETPSKF 2764
            IKEV +VF  YGV+++ RHLSLIAD+MTHSG YRPM+RHG I+ES+SP  KM+FET SKF
Sbjct: 1640 IKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKF 1699

Query: 2765 IVEAASHGLTDNLETPSARICLGLPVKLGTGSFDLMQNLQI 2887
            IVEAASHG+TDNLE+ SARICLGLPVK+GTG FDLMQ ++I
Sbjct: 1700 IVEAASHGMTDNLESASARICLGLPVKMGTGCFDLMQKIEI 1740


>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            RPA1-like [Cucumis sativus]
          Length = 1652

 Score =  970 bits (2507), Expect = 0.0
 Identities = 521/977 (53%), Positives = 660/977 (67%), Gaps = 19/977 (1%)
 Frame = +2

Query: 14   PVLPAVWKPKPLWTGKQVITSLLNHLTRGCKPCTLENEGKIPYQYFSRDSGNNRPSKDEE 193
            PVLPAVWKP+PLWTGKQV+T+LL+H+T+G  P  +E + KIP  +   D GN++  +  +
Sbjct: 684  PVLPAVWKPEPLWTGKQVVTALLDHITQGSPPFFVEKDVKIPRGFLILDEGNSKKKEHTK 743

Query: 194  AGA-------ENKLLIRRNELVRGVIDKAQFGKYGLVHTVQELYGSDTAGVLLSALSRLF 352
                      ++ LLI +NELVRGVIDKAQFG YGLVHTVQELYGS+TAG+LLS +SRLF
Sbjct: 744  VDKLKAARLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTAGLLLSVMSRLF 803

Query: 353  TCFLQMHGFTCGVDDLILLPQYDVQR-KXXXXXXXXXXXXHCDFVNFKRG-KIGPKELQY 526
            T FLQ HGFTCGVDDL+L+   D +R K            H  F+  K G K+ P  LQ 
Sbjct: 804  TVFLQTHGFTCGVDDLLLIECMDKEREKQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQL 863

Query: 527  EIEKVMRNNGESAVARLDGKMKNELREK--GSKINKELLLNGLYKPFPKNCISLMTISGA 700
             IEK +  NGE+A+  LD KM ++L E+   SK+ K+LL  GL KP  KNCISLMT SGA
Sbjct: 864  NIEKTISYNGEAALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSGA 923

Query: 701  KGSSVNFQQISSSLGQQELEGKRVPRMTSGKTLPSFSPWDFSSRAGGYITDRFLTGLRPQ 880
            KG + NFQQISS LGQQ+LEGKRVPRM SGKTLP F PWD++SRAGG+I DRFLTGLRPQ
Sbjct: 924  KGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAGGFIVDRFLTGLRPQ 983

Query: 881  EYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKNLECLKVCYDYTVRDADGSIVQFCYGED 1060
            EYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLE LK+CYD+TVRDADGS++QF YGED
Sbjct: 984  EYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKICYDHTVRDADGSVIQFQYGED 1043

Query: 1061 GVDVHQTSFLNKFEALAKNREIIGQKFHHKL-EYNAYIKKLPNKLKERVDELTNIEGQSS 1237
            GVDVH+T+F+ KFEALA N++++ +  HH+L +YN +I +LP+ L+E+ + + N   +  
Sbjct: 1044 GVDVHKTAFITKFEALAANQDMLYENSHHQLGKYNVFINELPSALREKGEFIYNSLSKDK 1103

Query: 1238 SEEL-KQRDLLMLMKQKYLSSLAQPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVT 1414
               L  + D + L++ KYLSSLAQPGEPVGV+AAQS+GEPSTQMTLNTFH AGRGEMNVT
Sbjct: 1104 VPGLVLKEDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVT 1163

Query: 1415 LGIPRLQEILMTATNEIKTPIVTCRLLEGKSXXXXXXXXXXXXXXXXXXIIESVEICVVP 1594
            LGIPRLQEILMTA+ +IKTPI+TC L EG S                  IIES+ + VVP
Sbjct: 1164 LGIPRLQEILMTASQDIKTPIMTCPLKEGYSMDVAKGLANKLKKITVADIIESMNVTVVP 1223

Query: 1595 LYIYKDQICRLYKIKIKI------KKHELVSKEDCQETLEVMFLRELEDAIENHVSLLSR 1756
                K +IC +YK++I         +H  +S ED + TLE +FL ELE  IE  + LLS+
Sbjct: 1224 FSQRKREICSIYKLRIDFYPLENNAQHGHISPEDLENTLETVFLEELEGLIEREMVLLSK 1283

Query: 1757 ISGIKDFTENIESTSASETGDAVSGNKSQXXXXXXXXXXXXXXXXXXXAQKRKRQASDEI 1936
            I+GIK F  + +S  +SE  +  S  + +                    +K+K QA+DE+
Sbjct: 1284 INGIKXFVPDSQSKGSSEGDEVSSSRQEEMDDDDEGNDLDVAEDLGSDXEKQKLQANDEM 1343

Query: 1937 DYEDGIDGKSNEVELTELXXXXXXXXXXXXXXXXXXXGHVEDVDVEDEPSNKSHDKGLIT 2116
            DYED  +   N  E +                       V+D   E++P      K +  
Sbjct: 1344 DYEDDSEDDLNAKESSTGFESEVDQGDEAEITNNDMIEIVKDSASENQPEIVDVSKSMSK 1403

Query: 2117 EPTSTDXXXXXXXXXXXRGALVRKDSDRSCFVKTKGQHYEVHFRFINEPHILLSQIVQKV 2296
            E T+             +  LVRK++DRS FV+ K  H+EVHF+F NEPH LLSQIVQ+ 
Sbjct: 1404 EKTT----ETSKEKKKVKSELVRKETDRSIFVEAKENHFEVHFKFTNEPHTLLSQIVQRA 1459

Query: 2297 AKKVPLSGSGKIEHCQQLSYDVLEKQVLWXXXXXXXXXXXXXXQKDLSNLCALKAAGVNI 2476
            A+KV +  SGKI  CQQ++    E QV++              +K+   + AL+ +GV+ 
Sbjct: 1460 AQKVSIQRSGKIIQCQQIT--CKEGQVIYHGNNLKERKNLKPEEKE--KIPALQTSGVDF 1515

Query: 2477 TALWEMQDVLDVNHIYSNNIHLMLKTYGVEVARKTIIKEVQDVFKIYGVEIDYRHLSLIA 2656
              LWEMQD LDV +IYSN+IH ML+TYGVE AR TII+E+Q++F  YG+ ++ RHLSL+A
Sbjct: 1516 KTLWEMQDELDVRYIYSNDIHAMLQTYGVEAARATIIREIQNIFTSYGISVNIRHLSLVA 1575

Query: 2657 DYMTHSGEYRPMSRHGMISESLSPLMKMSFETPSKFIVEAASHGLTDNLETPSARICLGL 2836
            DYMTHSG YRPMSR G IS+S+SP  +M+FET  KFIV+AA HG  DNLETPS+RICLGL
Sbjct: 1576 DYMTHSGGYRPMSRLGGISDSISPFSRMTFETAGKFIVQAALHGEVDNLETPSSRICLGL 1635

Query: 2837 PVKLGTGSFDLMQNLQI 2887
            PVK+GTGSFDLMQ +++
Sbjct: 1636 PVKMGTGSFDLMQKIEV 1652


>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
            sativus]
          Length = 1650

 Score =  967 bits (2501), Expect = 0.0
 Identities = 528/982 (53%), Positives = 662/982 (67%), Gaps = 24/982 (2%)
 Frame = +2

Query: 14   PVLPAVWKPKPLWTGKQVITSLLNHLTRGCKPCTLENEGKIPYQYFS-RDSGNNRPSKDE 190
            PVLPAVWKP+PLWTGKQV+T+LL+H+T+G  P  +E + KIP  +F  RD GNN   K E
Sbjct: 678  PVLPAVWKPEPLWTGKQVVTALLDHITQGSPPFFVEKDVKIPRGFFKCRDMGNNSSKKKE 737

Query: 191  EAGAE---------NKLLIRRNELVRGVIDKAQFGKYGLVHTVQELYGSDTAGVLLSALS 343
                +         + LLI +NELVRGVIDKAQFG YGLVHTVQELYGS+TAG+LLS +S
Sbjct: 738  HTKVDKLKAARLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTAGLLLSVMS 797

Query: 344  RLFTCFLQMHGFTCGVDDLILLPQYDVQR-KXXXXXXXXXXXXHCDFVNFKRG-KIGPKE 517
            RLFT FLQ HGFTCGVDDL+L+   D +R K            H  F+  K G K+ P  
Sbjct: 798  RLFTVFLQTHGFTCGVDDLLLIECMDKEREKQLQICEKIGEQVHLGFLKVKDGEKLDPMT 857

Query: 518  LQYEIEKVMRNNGESAVARLDGKMKNELREK--GSKINKELLLNGLYKPFPKNCISLMTI 691
            LQ  IEK +  NGE+A+  LD KM ++L E+   SK+ K+LL  GL KP  KNCISLMT 
Sbjct: 858  LQLNIEKTISYNGEAALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTT 917

Query: 692  SGAKGSSVNFQQISSSLGQQELEGKRVPRMTSGKTLPSFSPWDFSSRAGGYITDRFLTGL 871
            SGAKG + NFQQISS LGQQ+LEGKRVPRM SGKTLP F PWD++SRAGG+I DRFLTGL
Sbjct: 918  SGAKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAGGFIVDRFLTGL 977

Query: 872  RPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKNLECLKVCYDYTVRDADGSIVQFCY 1051
            RPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLE LK+CYD+TVRDADGS++QF Y
Sbjct: 978  RPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKICYDHTVRDADGSVIQFQY 1037

Query: 1052 GEDGVDVHQTSFLNKFEALAKNREIIGQKFHHKL-EYNAYIKKLPNKLKERVDELTNIEG 1228
            GEDGVDVH+T+F+ KFEALA N++++ +  HH+L +YN +I +LP+ L+E+ + + N   
Sbjct: 1038 GEDGVDVHKTAFITKFEALAANQDMLYENSHHQLGKYNVFINELPSALREKGEFIYNSLS 1097

Query: 1229 QSSSEEL-KQRDLLMLMKQKYLSSLAQPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEM 1405
            +     L  + D + L++ KYLSSLAQPGEPVGV+AAQS+GEPSTQMTLNTFH  GRGEM
Sbjct: 1098 KDKVPGLVLKEDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHVGRGEM 1157

Query: 1406 NVTLGIPRLQEILMTATNEIKTPIVTCRLLEGKSXXXXXXXXXXXXXXXXXXIIESVEIC 1585
            NVTLGI RLQEILMTA+ +IKTPI+TC L EG S                  IIES+ + 
Sbjct: 1158 NVTLGILRLQEILMTASQDIKTPIMTCPLKEGYSMDVAKGLANKLKKITVADIIESMNVT 1217

Query: 1586 VVPLYIYKDQICRLYKIKIKI------KKHELVSKEDCQETLEVMFLRELEDAIENHVSL 1747
            VVP    K +IC +YK++I         +H  +S ED + TLE +FL ELE  IE  + L
Sbjct: 1218 VVPFSQRKREICSIYKLRIDFYPLENNAQHGHISPEDLENTLETVFLEELEGLIEREMVL 1277

Query: 1748 LSRISGIKDFTENIESTSASETGDAVSGN--KSQXXXXXXXXXXXXXXXXXXXAQKRKRQ 1921
            LS+I+GIK+F  + +S  +SE GD VS +  K                      +K+K Q
Sbjct: 1278 LSKINGIKNFVPDSQSKGSSE-GDEVSSSRQKENDDDDDEGNDLDVAEDLGSDMKKQKLQ 1336

Query: 1922 ASDEIDYEDGIDGKSNEVELTELXXXXXXXXXXXXXXXXXXXGHVEDVDVEDEPSNKSHD 2101
            A+DE+DYED  +   N  E +                       V+D   E++P      
Sbjct: 1337 ANDEMDYEDDSEDDLNAKESSTGFESEVDQGDEAEITNNDMIEIVKDSASENQPEIVDVS 1396

Query: 2102 KGLITEPTSTDXXXXXXXXXXXRGALVRKDSDRSCFVKTKGQHYEVHFRFINEPHILLSQ 2281
            K +  E T+             +  LVRK++DRS FV+ K  H+EVHF+F NEPH LLSQ
Sbjct: 1397 KSMSKEKTT----ETSKEKKKVKSELVRKETDRSIFVEAKENHFEVHFKFTNEPHTLLSQ 1452

Query: 2282 IVQKVAKKVPLSGSGKIEHCQQLSYDVLEKQVLWXXXXXXXXXXXXXXQKDLSNLCALKA 2461
            IVQ+ A+KV +  SGKI  CQQ++    E QV++              +K+   + AL+ 
Sbjct: 1453 IVQRAAQKVSIQRSGKIIQCQQIT--CKEGQVIYHGNNLKERKNLKPEEKE--KIPALQT 1508

Query: 2462 AGVNITALWEMQDVLDVNHIYSNNIHLMLKTYGVEVARKTIIKEVQDVFKIYGVEIDYRH 2641
            +GV+   LWEMQD LDV +IYSN+IH ML+TYGVE AR TII+E+Q++F  YG+ ++ RH
Sbjct: 1509 SGVDFKTLWEMQDELDVRYIYSNDIHAMLQTYGVEAARATIIREIQNIFTSYGISVNIRH 1568

Query: 2642 LSLIADYMTHSGEYRPMSRHGMISESLSPLMKMSFETPSKFIVEAASHGLTDNLETPSAR 2821
            LSL+ADYMTHSG YRPMSR G IS+S+SP  +M+FET  KFIV+AA HG  DNLETPS+R
Sbjct: 1569 LSLVADYMTHSGGYRPMSRLGGISDSISPFSRMTFETAGKFIVQAALHGEVDNLETPSSR 1628

Query: 2822 ICLGLPVKLGTGSFDLMQNLQI 2887
            ICLGLPVK+GTGSFDLMQ +++
Sbjct: 1629 ICLGLPVKMGTGSFDLMQKIEV 1650


>ref|XP_003537204.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1653

 Score =  924 bits (2389), Expect = 0.0
 Identities = 508/984 (51%), Positives = 647/984 (65%), Gaps = 29/984 (2%)
 Frame = +2

Query: 23   PAVWKPKPLWTGKQVITSLLNHLTRGCKPCTLENEGKIPYQYFSRDSGNNR-----PSKD 187
            PA+WKP+PLWTGKQVI++LL ++TRG  P T E   KIP  +F       +      SK 
Sbjct: 693  PAIWKPEPLWTGKQVISALLYYITRGSPPFTAEKNAKIPSNFFKTQIRKGKRYTEDTSKK 752

Query: 188  EEAGAENKLLIRRNELVRGVIDKAQFGKYGLVHTVQELYGSDTAGVLLSALSRLFTCFLQ 367
            ++   E+KLLI +N+LVRGV+DKAQFG YG++HTVQELYGS+ AG LLSALSRLFT FLQ
Sbjct: 753  KDKPDEDKLLIYKNDLVRGVVDKAQFGDYGMIHTVQELYGSNVAGNLLSALSRLFTTFLQ 812

Query: 368  MHGFTCGVDDLILLPQYDVQR-KXXXXXXXXXXXXHCDFVNFKRG-KIGPKELQYEIEKV 541
            MHGFTCGVDDL+L    DV+R              H +F+  K    I P  LQ  IEK 
Sbjct: 813  MHGFTCGVDDLMLTEGKDVERMNQLKSCEIIGDSVHREFIGVKNSDNIDPVTLQLNIEKK 872

Query: 542  MRNNGESAVARLDGKMKNELREKGSK-INKELLLNGLYKPFPKNCISLMTISGAKGSSVN 718
            +R+NGE+A+  LD KM + L  + S  I K+LL  G+ KP  KNCISLMT SGAKGS VN
Sbjct: 873  IRSNGEAALT-LDRKMTSNLNSRTSSGILKKLLSEGILKPSGKNCISLMTTSGAKGSMVN 931

Query: 719  FQQISSSLGQQELEGKRVPRMTSGKTLPSFSPWDFSSRAGGYITDRFLTGLRPQEYYFHC 898
            FQQISS LGQQELEGKRVPRM SGKTLP F PWD S RAGG+I DRFLT L PQEYYFHC
Sbjct: 932  FQQISSHLGQQELEGKRVPRMVSGKTLPCFPPWDCSPRAGGFIIDRFLTALHPQEYYFHC 991

Query: 899  MAGREGLVDTAVKTSRSGYLQRCLVKNLECLKVCYDYTVRDADGSIVQFCYGEDGVDVHQ 1078
            MAGREGLVDTAVKTSRSGYLQRCL+KNLECLKVCYD+TVRDADGSI+QF YGEDGVDVHQ
Sbjct: 992  MAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHQ 1051

Query: 1079 TSFLNKFEALAKNREIIGQKFHHKLEYNA-YIKKLPNKLKERVDELTNIEGQSSSEELKQ 1255
            TSF+ +F AL+ N+E++   +  +L+ ++ YI KLP  L+ + ++ +    Q +   ++Q
Sbjct: 1052 TSFITEFGALSTNKELVFSNYCRQLDRSSPYINKLPEALEGKAEKFSK---QRNLGSMEQ 1108

Query: 1256 RDLLMLMKQKYLSSLAQPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQ 1435
             D L LM+ KY+S LAQPGEPVGV+A+QSVGEP+TQMTLNTFHLAGRGEMNVTLGIPRLQ
Sbjct: 1109 ADFLRLMEHKYVSCLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQ 1168

Query: 1436 EILMTATNEIKTPIVTCRLLEGKSXXXXXXXXXXXXXXXXXXIIESVEICVVPLYIYKDQ 1615
            EILM A  +IKTP +TC L   KS                  II+S+++ VVP+ +   Q
Sbjct: 1169 EILMAAARDIKTPFMTCPLRHDKSMKDAICLADKLKKITVADIIKSMKVSVVPVTVLGGQ 1228

Query: 1616 ICRLYKIKIKIKKHEL------VSKEDCQETLEVMFLRELEDAIENHVSLLSRISGIKDF 1777
            +C +YK+ +K+ K +       ++ +D +ETL V F+RELEDAI+NH++LLS+ISGIK F
Sbjct: 1229 VCSIYKLVMKLYKSKQYPEYTDITLDDWEETLRVNFVRELEDAIQNHMTLLSKISGIKKF 1288

Query: 1778 TENIESTSASETGDAVSG----------NKSQXXXXXXXXXXXXXXXXXXXAQKRKRQAS 1927
              + +S  ++ + DA S           N                      AQKRK Q +
Sbjct: 1289 KTDPQSNYSNSSEDAHSNGSESEKKGQNNDDDDEDGGGVEDTEGYEDLGSDAQKRKLQGT 1348

Query: 1928 DEIDYEDGIDGKSNEVELTELXXXXXXXXXXXXXXXXXXXGHVEDVDVEDEPSN---KSH 2098
            DE+DYEDG + ++++ EL+E                        DVD  +  +N    ++
Sbjct: 1349 DEVDYEDGPEEETHDGELSEEIEGDEDG---------------SDVDANENYNNVTDANN 1393

Query: 2099 DKGLITEPTS-TDXXXXXXXXXXXRGALVRKDSDRSCFVKTKGQHYEVHFRFINEPHILL 2275
             +GL     S T            +     K  DR+ FV+ KG+H+E+HFRF  EPHILL
Sbjct: 1394 SEGLEKPSKSKTIDEKQNLKREKKKSEPTTKKYDRAIFVEAKGKHFEIHFRFTGEPHILL 1453

Query: 2276 SQIVQKVAKKVPLSGSGKIEHCQQLSYDVLEKQVLWXXXXXXXXXXXXXXQKDLSNLCAL 2455
            +QI Q+ AKKV +   GK+  C+ ++    E  V++              +K+   + AL
Sbjct: 1454 TQIAQRTAKKVCIQNFGKVGECKAITCK--ESGVIYYGKDGRKRIEISASEKE--QIPAL 1509

Query: 2456 KAAGVNITALWEMQDVLDVNHIYSNNIHLMLKTYGVEVARKTIIKEVQDVFKIYGVEIDY 2635
            + +GV+    WE++D LDV +IYSNN+H ML  YGVE AR+TII+EVQ+VFK YG+ ++ 
Sbjct: 1510 QTSGVHFKTFWELEDDLDVRYIYSNNVHAMLNAYGVEAARETIIREVQNVFKSYGISVNI 1569

Query: 2636 RHLSLIADYMTHSGEYRPMSRHGMISESLSPLMKMSFETPSKFIVEAASHGLTDNLETPS 2815
            RHL+LIAD+MTH+G YRPM+R G I++S SP +KM FET   FIVEAA HG  DNLETPS
Sbjct: 1570 RHLTLIADFMTHTGSYRPMNRTGSIADSTSPFIKMCFETAGNFIVEAAYHGQVDNLETPS 1629

Query: 2816 ARICLGLPVKLGTGSFDLMQNLQI 2887
            ARICLGLPVK+GTG  DL+Q L+I
Sbjct: 1630 ARICLGLPVKMGTGCHDLIQKLEI 1653