BLASTX nr result

ID: Cnidium21_contig00007629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007629
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333421.1| cc-nbs-lrr resistance protein [Populus trich...    71   2e-10
ref|XP_002333623.1| cc-nbs-lrr resistance protein [Populus trich...    67   3e-10
ref|XP_002331377.1| predicted protein [Populus trichocarpa] gi|2...    68   2e-09
ref|XP_002332553.1| cc-nbs-lrr resistance protein [Populus trich...    67   3e-09
ref|XP_002333419.1| cc-nbs-lrr resistance protein [Populus trich...    66   6e-09

>ref|XP_002333421.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|105922514|gb|ABF81421.1| NBS-LRR type disease
            resistance protein [Populus trichocarpa]
            gi|222836549|gb|EEE74956.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1177

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
 Frame = +3

Query: 3    PKLREMELERMDNVRIIGTN-WGAAGKVTTMYPSLKKLSLWNMPKLEEWLEAGGDQSSVQ 179
            P+L+ +E+  M NV+ IG   + ++G    ++P+LK+L+L N+  LEEW+  GG+    Q
Sbjct: 778  PRLKILEMSGMPNVKCIGNEFYSSSGSTAVLFPALKELTLSNLDGLEEWMVPGGEGD--Q 835

Query: 180  VFPKLEVLRIFSCSKLTRMPDSSFPSLKKLII 275
            VFP LEVLRI  C KL  +P     SL K +I
Sbjct: 836  VFPFLEVLRIQWCGKLKSIPIYRLSSLVKFVI 867


>ref|XP_002333623.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222837867|gb|EEE76232.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1186

 Score = 67.4 bits (163), Expect(2) = 3e-10
 Identities = 39/96 (40%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
 Frame = +3

Query: 3    PKLREMELERMDNVRIIGTN-WGAAGKVTTMYPSLKKLSLWNMPKLEEWLEAGGDQSSVQ 179
            P+L+ +E+  M NV+ IG   + ++G    ++P+LK+L+L  M  LEEW+  GG+   V 
Sbjct: 782  PRLKILEMSGMPNVKCIGNEFYSSSGSTAVLFPALKELTLSKMDGLEEWMVPGGE--VVA 839

Query: 180  VFPKLEVLRIFSCSKLTRMPDSSFPSLKKLIIHDSE 287
            VFP LE L I  C KL  +P     SL K  I D E
Sbjct: 840  VFPCLEKLSIEKCGKLESIPICRLSSLVKFEISDCE 875



 Score = 23.1 bits (48), Expect(2) = 3e-10
 Identities = 21/74 (28%), Positives = 30/74 (40%)
 Frame = +1

Query: 397  LVLSECPDLTSSILAVKEGACLRLLQIMRLCVFKG*KALSDTIASLEELRIKRCEESESL 576
            L +S C +L S     +E  C      ++ C      +     ASLE+LRI  C E   +
Sbjct: 916  LDISWCSELISIPGDFRELKCSLKELFIKGCKLGALPSGLQCCASLEDLRINDCGELIHI 975

Query: 577  PTFDRSHSIRCLGI 618
                   S+R L I
Sbjct: 976  SDLQELSSLRRLWI 989


>ref|XP_002331377.1| predicted protein [Populus trichocarpa] gi|222874415|gb|EEF11546.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
 Frame = +3

Query: 3   PKLREMELERMDNVRIIGTNWGAAG-KVTTMYPSLKKLSLWNMPKLEEWLEAGGDQSSVQ 179
           P+L+ +++  M NV+ IG  + ++G     ++P+LK+L+LW+M  LEEW+ AGG+   V 
Sbjct: 77  PRLKILKMSGMRNVKCIGNEFYSSGDNAVVLFPTLKELTLWDMDGLEEWMVAGGE--VVA 134

Query: 180 VFPKLEVLRIFSCSKLTRMPDSSFPSLKKLII 275
           VFP+LE L I  C KL  +P     SL +  I
Sbjct: 135 VFPRLEELSIKRCGKLKSIPLCHLSSLVRFEI 166


>ref|XP_002332553.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222833029|gb|EEE71506.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1185

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
 Frame = +3

Query: 3    PKLREMELERMDNVRIIGTN-WGAAGKVTTMYPSLKKLSLWNMPKLEEWLEAGGDQSSVQ 179
            P+L+ +++  M NV+ IG   + ++G    ++P+LKKL+LW M  LEEW+  GG+   V 
Sbjct: 782  PRLKILKMSGMPNVKCIGNEFYSSSGSAAVLFPALKKLTLWGMDGLEEWMVPGGE--VVA 839

Query: 180  VFPKLEVLRIFSCSKLTRMP 239
            VFP LE L I  C KL  +P
Sbjct: 840  VFPCLEKLSIEKCGKLESIP 859


>ref|XP_002333419.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222836547|gb|EEE74954.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 961

 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
 Frame = +3

Query: 3   PKLREMELERMDNVRIIGTNW--GAAGKVTTMYPSLKKLSLWNMPKLEEWLEAGGDQSSV 176
           P+L+ +E+ RM NV+ IG  +   ++G    ++P+LK+L+L  M  LEEW+  GG+    
Sbjct: 562 PRLKILEIGRMPNVKCIGNEFYSSSSGSEAVLFPALKELTLMYMDGLEEWMVPGGEGD-- 619

Query: 177 QVFPKLEVLRIFSCSKLTRMPDSSFPSLKKLII 275
           QVFP LE L I+ C KL  +P     SL K  I
Sbjct: 620 QVFPCLERLSIWMCGKLKSIPICGLSSLVKFDI 652


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