BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007617
         (843 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymera...   381   e-104
emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]   373   e-101
ref|XP_002515912.1| RNA polymerase II mediator complex subunit, ...   340   3e-91
ref|XP_004149176.1| PREDICTED: LOW QUALITY PROTEIN: mediator of ...   337   3e-90
ref|XP_003531638.1| PREDICTED: putative mediator of RNA polymera...   333   3e-89

>ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 6 [Vitis vinifera]
          Length = 258

 Score =  381 bits (979), Expect = e-104
 Identities = 186/250 (74%), Positives = 200/250 (80%), Gaps = 4/250 (1%)
 Frame = +2

Query: 104 MASTPMLPPNPAAGNPNFDGNARTAPAPPGTDMTGMCFRDQLWLNTYPLDRNLVFDYFAL 283
           MASTPM PPNPAAGNPNFDGN    P PPGTDMTG+CFRDQLWLN+YPLDRNLVFDYFAL
Sbjct: 1   MASTPMAPPNPAAGNPNFDGNPPAVPTPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFAL 60

Query: 284 SPFYDWTCNNETIRMRSIHPLDLSHLSKMTGIEYTLSEVMEPHLFVFRKQKRDSPEKVTP 463
           SPFYDWTCNNE +R+RSIHPLD SHLSKMTG EY L+EVMEPHLFV RKQKRD PEKVTP
Sbjct: 61  SPFYDWTCNNEQLRLRSIHPLDTSHLSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEKVTP 120

Query: 464 MLTYYVLDGSIYQAPQLCNVFASRVGRALYHISKAFTTAASKLEKIGYVDTENESATLVP 643
           MLTYY+LDGSIYQAPQLCNVF +R+GRALYHISKAFTTAASKLEKIGYVD ENE+  L  
Sbjct: 121 MLTYYILDGSIYQAPQLCNVFTARIGRALYHISKAFTTAASKLEKIGYVDAENENPALES 180

Query: 644 KAPKEIIDLKEVKRIDHILASLQRKLXXXXXXXXXXXXXXXXKTAEGDNASD----AQAQ 811
           K  KE ID KEV R+D ILASLQRKL                 TAEG+   +    A+ Q
Sbjct: 181 KVGKETIDFKEVMRVDQILASLQRKLPPAPPPPQFPEGYAPPPTAEGEKGPETQQAAEPQ 240

Query: 812 LPPLDPILDQ 841
           LP LDPI+DQ
Sbjct: 241 LPALDPIIDQ 250


>emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]
          Length = 253

 Score =  373 bits (958), Expect = e-101
 Identities = 182/245 (74%), Positives = 196/245 (80%), Gaps = 4/245 (1%)
 Frame = +2

Query: 119 MLPPNPAAGNPNFDGNARTAPAPPGTDMTGMCFRDQLWLNTYPLDRNLVFDYFALSPFYD 298
           M PPNPAAGNPNFDGN   AP PPGTDMTG+CFRDQLWLN+YPLDRNLVFDYFALSPFYD
Sbjct: 1   MAPPNPAAGNPNFDGNPPAAPTPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYD 60

Query: 299 WTCNNETIRMRSIHPLDLSHLSKMTGIEYTLSEVMEPHLFVFRKQKRDSPEKVTPMLTYY 478
           WTCNNE +R+RSIHPLD SHLSKMTG EY L+EVMEPHLFV RKQKRD PEKVTPMLTYY
Sbjct: 61  WTCNNEQLRLRSIHPLDTSHLSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEKVTPMLTYY 120

Query: 479 VLDGSIYQAPQLCNVFASRVGRALYHISKAFTTAASKLEKIGYVDTENESATLVPKAPKE 658
           +LDGSIYQAPQLCNVF +R+GRALYHISKAFTTAASKLEKIGYVD ENE+  L  K  KE
Sbjct: 121 ILDGSIYQAPQLCNVFTARIGRALYHISKAFTTAASKLEKIGYVDAENENPALESKVGKE 180

Query: 659 IIDLKEVKRIDHILASLQRKLXXXXXXXXXXXXXXXXKTAEGDNASD----AQAQLPPLD 826
            ID KEV R+D ILASLQRKL                 TAEG+   +    A+ QLP LD
Sbjct: 181 TIDFKEVMRVDQILASLQRKLPPAPPAPQFPEGYAPPPTAEGEKGPETQQAAEPQLPALD 240

Query: 827 PILDQ 841
           PI+DQ
Sbjct: 241 PIIDQ 245


>ref|XP_002515912.1| RNA polymerase II mediator complex subunit, putative [Ricinus
           communis] gi|223544817|gb|EEF46332.1| RNA polymerase II
           mediator complex subunit, putative [Ricinus communis]
          Length = 251

 Score =  340 bits (871), Expect = 3e-91
 Identities = 170/236 (72%), Positives = 187/236 (79%), Gaps = 6/236 (2%)
 Frame = +2

Query: 152 NFDGN--ARTAPAPPGTDMTGMCFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNETIR 325
           NFDGN  A   P PPGTDMTG+CFRDQLWLNTYPLDRNL+FDYFALSPFYDWTCNNE +R
Sbjct: 9   NFDGNPLAPAPPQPPGTDMTGICFRDQLWLNTYPLDRNLIFDYFALSPFYDWTCNNEQLR 68

Query: 326 MRSIHPLDLSHLSKMTGIEYTLSEVMEPHLFVFRKQKRDSPEKVTPMLTYYVLDGSIYQA 505
           ++SIHPLDLSHLSKMTG EY L+EV+EP+LFV RKQKRDSPEKVTPMLTYYVLDGSIYQA
Sbjct: 69  LQSIHPLDLSHLSKMTGTEYMLNEVIEPNLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQA 128

Query: 506 PQLCNVFASRVGRALYHISKAFTTAASKLEKIGYVDTENESATLVPKAPKEIIDLKEVKR 685
           PQLCNVFA+R+GRALYHISKAFTTAASKLEKIGYVD E E      K  KE+ID KEVKR
Sbjct: 129 PQLCNVFAARIGRALYHISKAFTTAASKLEKIGYVD-EGEGVASESKVGKEVIDFKEVKR 187

Query: 686 IDHILASLQRKLXXXXXXXXXXXXXXXXKTAEGDNASD----AQAQLPPLDPILDQ 841
           IDHILAS+QRKL                 T E +  S+     + Q PP+DPI+DQ
Sbjct: 188 IDHILASIQRKLPPAPPPPPFPEGYVPPATVEAEKGSETRQAVETQPPPVDPIIDQ 243


>ref|XP_004149176.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
           transcription subunit 6-like [Cucumis sativus]
          Length = 260

 Score =  337 bits (863), Expect = 3e-90
 Identities = 176/253 (69%), Positives = 193/253 (76%), Gaps = 7/253 (2%)
 Frame = +2

Query: 104 MASTPMLPPNPAAGNPNFDGNAR-TAPAPPGTDMT---GMCFRDQLWLNTYPLDRNLVFD 271
           MA+ P  PP    G  NF+G     AP PPGTDMT   G+CFRDQLWLNTYPLDRNLVFD
Sbjct: 1   MATPP--PPTAPPGTGNFEGGPLPAAPQPPGTDMTNLPGICFRDQLWLNTYPLDRNLVFD 58

Query: 272 YFALSPFYDWTCNNETIRMRSIHPLDLSHLSKMTGIEYTLSEVMEPHLFVFRKQKRDSPE 451
           YFALSPFYDWTCNNE +RMRSIHPLDLS LSKMTGIEY L+EVMEPHLFVFRKQKRD PE
Sbjct: 59  YFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPE 118

Query: 452 KVTPMLTYYVLDGSIYQAPQLCNVFASRVGRALYHISKAFTTAASKLEKIGYVDTENESA 631
           KVTPMLTYY+LDGSIYQAPQLC+VFA+RV RALY+ISKAFTTA+SKLEKIGYVD+ENES 
Sbjct: 119 KVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESE 178

Query: 632 TLVPKAPKEIIDLKEVKRIDHILASLQRKLXXXXXXXXXXXXXXXXKTAE---GDNASDA 802
            + P   KE I+ KEVKR+DHILASLQRKL                 TAE   G      
Sbjct: 179 EVKP--AKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAPAATAETEKGPENQQG 236

Query: 803 QAQLPPLDPILDQ 841
           ++Q P  DPI+DQ
Sbjct: 237 ESQQPSADPIIDQ 249


>ref|XP_003531638.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 6-like [Glycine max]
          Length = 252

 Score =  333 bits (854), Expect = 3e-89
 Identities = 168/242 (69%), Positives = 188/242 (77%), Gaps = 7/242 (2%)
 Frame = +2

Query: 137 AAGNPNFDGNARTAPAPPGTDMTGMCFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNE 316
           A GN   +G    AP PPGTDMTG+CFRDQLWLN++PLDRNLVFDYFALSPFYDWTCNNE
Sbjct: 4   APGNQMLEGGGG-APQPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNE 62

Query: 317 TIRMRSIHPLDLSHLSKMTGIEYTLSEVMEPHLFVFRKQKRDSPEKVTPMLTYYVLDGSI 496
            +RMRS+HPLD+S LSKMTG EY LSEVMEPHLFV RKQKRDSP+KVTPML YYVLDGSI
Sbjct: 63  QLRMRSVHPLDISQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSI 122

Query: 497 YQAPQLCNVFASRVGRALYHISKAFTTAASKLEKIGY---VDTENESATLVPKAPKEIID 667
           YQAPQLCNVFA+R+GRALY+I KAFTTAASKLEKIGY    D+ENE+A L  K  KE ID
Sbjct: 123 YQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYAGSADSENETALLESKTAKETID 182

Query: 668 LKEVKRIDHILASLQRKLXXXXXXXXXXXXXXXXKTAEGDNASD----AQAQLPPLDPIL 835
           +KEVKR+DHILASLQRKL                 TAE +  ++    A+ Q P  DPI+
Sbjct: 183 IKEVKRVDHILASLQRKLPPAPPPPPFPEGYVPPPTAETEKGTETQEAAETQAPTADPII 242

Query: 836 DQ 841
           DQ
Sbjct: 243 DQ 244