BLASTX nr result

ID: Cnidium21_contig00007529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007529
         (1031 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002992756.1| hypothetical protein SELMODRAFT_186992 [Sela...   467   e-129
sp|Q9ZPN8.1|TBB3_ELEIN RecName: Full=Tubulin beta-3 chain; AltNa...   467   e-129
gb|ADE76978.1| unknown [Picea sitchensis]                             466   e-129
tpg|DAA51374.1| TPA: hypothetical protein ZEAMMB73_041268 [Zea m...   466   e-129
ref|NP_001168917.1| uncharacterized protein LOC100382727 [Zea ma...   466   e-129

>ref|XP_002992756.1| hypothetical protein SELMODRAFT_186992 [Selaginella moellendorffii]
            gi|300139401|gb|EFJ06142.1| hypothetical protein
            SELMODRAFT_186992 [Selaginella moellendorffii]
          Length = 445

 Score =  467 bits (1202), Expect = e-129
 Identities = 226/231 (97%), Positives = 230/231 (99%)
 Frame = -1

Query: 1031 VHQLVENADQCMVLDNEALYDICFRTLKLTTPTFGDLNHLISATMSGVTCCLRFPGQLNS 852
            VHQLVENAD+CMVLDNEALYDICFRTLKLTTPTFGDLNHLISATMSGVTCCLRFPGQLNS
Sbjct: 189  VHQLVENADECMVLDNEALYDICFRTLKLTTPTFGDLNHLISATMSGVTCCLRFPGQLNS 248

Query: 851  DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHG 672
            DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHG
Sbjct: 249  DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHG 308

Query: 671  RYLTASAMFRGKMSTKEVDEQLMNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLTMSSTFI 492
            RYLTASAMFRGKMSTKEVDEQ++NVQNKNSSYFVEWIPNNVKSSVCDIPPKGL M+STFI
Sbjct: 309  RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFI 368

Query: 491  GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 339
            GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV
Sbjct: 369  GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419


>sp|Q9ZPN8.1|TBB3_ELEIN RecName: Full=Tubulin beta-3 chain; AltName: Full=Beta-3-tubulin
            gi|4415994|gb|AAD20180.1| beta-tubulin 3 [Eleusine
            indica]
          Length = 446

 Score =  467 bits (1201), Expect = e-129
 Identities = 225/231 (97%), Positives = 230/231 (99%)
 Frame = -1

Query: 1031 VHQLVENADQCMVLDNEALYDICFRTLKLTTPTFGDLNHLISATMSGVTCCLRFPGQLNS 852
            VHQLVENAD+CMVLDNEALYDICFRTLKL TPTFGDLNHLISATMSGVTCCLRFPGQLNS
Sbjct: 189  VHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNS 248

Query: 851  DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHG 672
            DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR+LTVPELTQQMWDAKNMMCAADPRHG
Sbjct: 249  DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHG 308

Query: 671  RYLTASAMFRGKMSTKEVDEQLMNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLTMSSTFI 492
            RYLTASAMFRGKMSTKEVDEQ++NVQNKNSSYFVEWIPNNVKSSVCDIPP+GLTMSSTFI
Sbjct: 309  RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPRGLTMSSTFI 368

Query: 491  GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 339
            GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV
Sbjct: 369  GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419


>gb|ADE76978.1| unknown [Picea sitchensis]
          Length = 445

 Score =  466 bits (1200), Expect = e-129
 Identities = 225/231 (97%), Positives = 230/231 (99%)
 Frame = -1

Query: 1031 VHQLVENADQCMVLDNEALYDICFRTLKLTTPTFGDLNHLISATMSGVTCCLRFPGQLNS 852
            VHQLVENAD+CMVLDNEALYDICFRTLKLTTP+FGDLNHLISATMSGVTCCLRFPGQLNS
Sbjct: 189  VHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNS 248

Query: 851  DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHG 672
            DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWD+KNMMCAADPRHG
Sbjct: 249  DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHG 308

Query: 671  RYLTASAMFRGKMSTKEVDEQLMNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLTMSSTFI 492
            RYLTASAMFRGKMSTKEVDEQ+MNVQNKNSSYFVEWIPNNVKSS CDIPPKGL+MSSTFI
Sbjct: 309  RYLTASAMFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSACDIPPKGLSMSSTFI 368

Query: 491  GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 339
            GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV
Sbjct: 369  GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419


>tpg|DAA51374.1| TPA: hypothetical protein ZEAMMB73_041268 [Zea mays]
          Length = 445

 Score =  466 bits (1199), Expect = e-129
 Identities = 225/231 (97%), Positives = 228/231 (98%)
 Frame = -1

Query: 1031 VHQLVENADQCMVLDNEALYDICFRTLKLTTPTFGDLNHLISATMSGVTCCLRFPGQLNS 852
            VHQLVENADQCMVLDNEALYDICFRTLKL TPTFGDLNHLISATMSGVTCCLRFPGQLNS
Sbjct: 189  VHQLVENADQCMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNS 248

Query: 851  DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHG 672
            DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHG
Sbjct: 249  DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHG 308

Query: 671  RYLTASAMFRGKMSTKEVDEQLMNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLTMSSTFI 492
            RYLTASAMFRGKMSTKEVDEQ++NVQNKNSSYFVEWIPNNVKSSVCDIPPKGL MS TF+
Sbjct: 309  RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLRMSGTFV 368

Query: 491  GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 339
            GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV
Sbjct: 369  GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419


>ref|NP_001168917.1| uncharacterized protein LOC100382727 [Zea mays]
            gi|223973749|gb|ACN31062.1| unknown [Zea mays]
          Length = 529

 Score =  466 bits (1199), Expect = e-129
 Identities = 225/231 (97%), Positives = 228/231 (98%)
 Frame = -1

Query: 1031 VHQLVENADQCMVLDNEALYDICFRTLKLTTPTFGDLNHLISATMSGVTCCLRFPGQLNS 852
            VHQLVENADQCMVLDNEALYDICFRTLKL TPTFGDLNHLISATMSGVTCCLRFPGQLNS
Sbjct: 273  VHQLVENADQCMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNS 332

Query: 851  DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHG 672
            DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHG
Sbjct: 333  DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHG 392

Query: 671  RYLTASAMFRGKMSTKEVDEQLMNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLTMSSTFI 492
            RYLTASAMFRGKMSTKEVDEQ++NVQNKNSSYFVEWIPNNVKSSVCDIPPKGL MS TF+
Sbjct: 393  RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLRMSGTFV 452

Query: 491  GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 339
            GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV
Sbjct: 453  GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 503



 Score =  130 bits (327), Expect = 5e-28
 Identities = 62/63 (98%), Positives = 62/63 (98%)
 Frame = -1

Query: 998 MVLDNEALYDICFRTLKLTTPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIP 819
           MVLDNEALYDICFRTLKL TPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIP
Sbjct: 1   MVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIP 60

Query: 818 FPR 810
           FPR
Sbjct: 61  FPR 63


Top