BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007516
         (1092 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284043.1| PREDICTED: sigma factor sigB regulation prot...   480   e-133
ref|XP_002524966.1| sigma factor sigb regulation protein rsbq, p...   465   e-128
ref|XP_003608457.1| Sigma factor sigB regulation protein rsbQ [M...   463   e-128
gb|AFK41000.1| unknown [Medicago truncatula]                          463   e-128
ref|XP_002303383.1| predicted protein [Populus trichocarpa] gi|1...   462   e-128

>ref|XP_002284043.1| PREDICTED: sigma factor sigB regulation protein rsbQ [Vitis
           vinifera] gi|147783136|emb|CAN70905.1| hypothetical
           protein VITISV_044176 [Vitis vinifera]
           gi|147795384|emb|CAN74235.1| hypothetical protein
           VITISV_040226 [Vitis vinifera]
          Length = 270

 Score =  480 bits (1235), Expect = e-133
 Identities = 228/268 (85%), Positives = 256/268 (95%)
 Frame = +3

Query: 96  MGIVEAAHNVKVLGSGAETIVLAHGFGTDQSVWKHLVPHIVDDYRVILFDNMGAGTTNPD 275
           MGIVE AHN+KV+GSG + IVLAHGFGTDQS+WKHLVPH+VDDYRVILFDNMGAGTTNP+
Sbjct: 1   MGIVEEAHNLKVVGSGEQIIVLAHGFGTDQSLWKHLVPHLVDDYRVILFDNMGAGTTNPE 60

Query: 276 YFDFDRYSTLEGYAYDVIAILTELQVQSCIYVGHSVSAMIGSLASISRPDLFTKLILVSG 455
           YFDF+RYS LEGYAYDV+AIL ELQVQSCI+VGHSVSAMIG++ASI+RPDLF+KLI ++G
Sbjct: 61  YFDFERYSNLEGYAYDVLAILEELQVQSCIFVGHSVSAMIGAIASITRPDLFSKLISING 120

Query: 456 SPRYLNDVDYFGGFEQEDLDQLFEAMQSNFKAWCAGFAPLAVGGDMDSVAVQEFSRTLFN 635
           SPRYLNDVDY+GGFEQEDLDQLFEAM SN+KAWC+GFAPLAVGGDMDSVAVQEFSRTLFN
Sbjct: 121 SPRYLNDVDYYGGFEQEDLDQLFEAMGSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFN 180

Query: 636 MRPDIALSVAKIIFMSDLRHLLCHVTVPCHIIQSMKDLAVPVVVSEYLHRNIGGESIVEV 815
           MRPDIALSVA+ IF  DLR +LCHVTVPCHI+QS+KDLAVPVVVSEYLH+N+GGESIVEV
Sbjct: 181 MRPDIALSVAQTIFQVDLRQILCHVTVPCHILQSIKDLAVPVVVSEYLHQNLGGESIVEV 240

Query: 816 MSTDGHLPQLSSPDVVIPVLLRHIRNNI 899
           M++DGHLPQLSSPD+V+PVLLRHIR NI
Sbjct: 241 MTSDGHLPQLSSPDIVVPVLLRHIRYNI 268


>ref|XP_002524966.1| sigma factor sigb regulation protein rsbq, putative [Ricinus
           communis] gi|223535801|gb|EEF37463.1| sigma factor sigb
           regulation protein rsbq, putative [Ricinus communis]
          Length = 270

 Score =  465 bits (1196), Expect = e-128
 Identities = 218/268 (81%), Positives = 253/268 (94%)
 Frame = +3

Query: 96  MGIVEAAHNVKVLGSGAETIVLAHGFGTDQSVWKHLVPHIVDDYRVILFDNMGAGTTNPD 275
           MGIVE AHNVK+LG+G + IVLAHGFGTDQSVWKHLVPH++DD++V+LFDNMGAGTTNPD
Sbjct: 1   MGIVEEAHNVKILGTGEQVIVLAHGFGTDQSVWKHLVPHLIDDFKVVLFDNMGAGTTNPD 60

Query: 276 YFDFDRYSTLEGYAYDVIAILTELQVQSCIYVGHSVSAMIGSLASISRPDLFTKLILVSG 455
           YFDF+RY+ LEGYAYD++AIL ELQV+SC++VGHSVSAM+G +ASISRPDLFTK++++S 
Sbjct: 61  YFDFERYAGLEGYAYDLLAILEELQVESCVFVGHSVSAMVGVVASISRPDLFTKIVMISA 120

Query: 456 SPRYLNDVDYFGGFEQEDLDQLFEAMQSNFKAWCAGFAPLAVGGDMDSVAVQEFSRTLFN 635
           SPRYLNDVDY+GGFEQEDL+QLFEAM++N+KAWC+GFAPLAVGGDMDSVAVQEFSRTLFN
Sbjct: 121 SPRYLNDVDYYGGFEQEDLNQLFEAMEANYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFN 180

Query: 636 MRPDIALSVAKIIFMSDLRHLLCHVTVPCHIIQSMKDLAVPVVVSEYLHRNIGGESIVEV 815
           MRPDIALSVA+ IF SD+R +L  V+VPCHI+QS KDLAVPVVVSEYLH+N+G ESI EV
Sbjct: 181 MRPDIALSVAQTIFQSDMRSILHMVSVPCHIVQSGKDLAVPVVVSEYLHQNLGSESIAEV 240

Query: 816 MSTDGHLPQLSSPDVVIPVLLRHIRNNI 899
           MSTDGHLPQLSSPDVVIPVLLRHIR+NI
Sbjct: 241 MSTDGHLPQLSSPDVVIPVLLRHIRHNI 268


>ref|XP_003608457.1| Sigma factor sigB regulation protein rsbQ [Medicago truncatula]
           gi|355509512|gb|AES90654.1| Sigma factor sigB regulation
           protein rsbQ [Medicago truncatula]
          Length = 270

 Score =  463 bits (1192), Expect = e-128
 Identities = 220/268 (82%), Positives = 253/268 (94%)
 Frame = +3

Query: 96  MGIVEAAHNVKVLGSGAETIVLAHGFGTDQSVWKHLVPHIVDDYRVILFDNMGAGTTNPD 275
           MGIVE AHNVKVLGSG+  IVLAHGFGTDQSVWKHLVPH++D++RVIL+DNMGAGTTNPD
Sbjct: 1   MGIVEEAHNVKVLGSGSRFIVLAHGFGTDQSVWKHLVPHLLDEFRVILYDNMGAGTTNPD 60

Query: 276 YFDFDRYSTLEGYAYDVIAILTELQVQSCIYVGHSVSAMIGSLASISRPDLFTKLILVSG 455
           YFDF+RYSTLEGYAYD++AIL EL+V SCI+VGHSVSAMIG++ASISRPDLF K+IL+S 
Sbjct: 61  YFDFERYSTLEGYAYDLLAILEELRVDSCIFVGHSVSAMIGTVASISRPDLFNKIILISA 120

Query: 456 SPRYLNDVDYFGGFEQEDLDQLFEAMQSNFKAWCAGFAPLAVGGDMDSVAVQEFSRTLFN 635
           SPRYLND DYFGGFEQEDLDQLF+AM SN+K+WC+GFAP+AVGGDM+SVAVQEFSRTLFN
Sbjct: 121 SPRYLNDRDYFGGFEQEDLDQLFDAMASNYKSWCSGFAPMAVGGDMESVAVQEFSRTLFN 180

Query: 636 MRPDIALSVAKIIFMSDLRHLLCHVTVPCHIIQSMKDLAVPVVVSEYLHRNIGGESIVEV 815
           MRPDIALSV + IF SD+R +LC VTVPCHIIQSMKDLAVPVVV+EYLH+++G ESIVEV
Sbjct: 181 MRPDIALSVLQTIFKSDMRQILCMVTVPCHIIQSMKDLAVPVVVAEYLHQHVGSESIVEV 240

Query: 816 MSTDGHLPQLSSPDVVIPVLLRHIRNNI 899
           MST+GHLPQLSSPDVVIPV+L+HIR++I
Sbjct: 241 MSTEGHLPQLSSPDVVIPVILKHIRHDI 268


>gb|AFK41000.1| unknown [Medicago truncatula]
          Length = 270

 Score =  463 bits (1191), Expect = e-128
 Identities = 219/268 (81%), Positives = 253/268 (94%)
 Frame = +3

Query: 96  MGIVEAAHNVKVLGSGAETIVLAHGFGTDQSVWKHLVPHIVDDYRVILFDNMGAGTTNPD 275
           MGIVE AHNVKVLGSG+  IVLAHGFGTDQSVWKHLVPH++D++RVIL+DNMGAGTTNPD
Sbjct: 1   MGIVEEAHNVKVLGSGSRFIVLAHGFGTDQSVWKHLVPHLLDEFRVILYDNMGAGTTNPD 60

Query: 276 YFDFDRYSTLEGYAYDVIAILTELQVQSCIYVGHSVSAMIGSLASISRPDLFTKLILVSG 455
           YFDF+RYSTLEGYAYD++AIL EL+V SCI+VGHSVSAMIG++ASISRPDLF K+IL+S 
Sbjct: 61  YFDFERYSTLEGYAYDLLAILEELRVDSCIFVGHSVSAMIGTVASISRPDLFNKIILISA 120

Query: 456 SPRYLNDVDYFGGFEQEDLDQLFEAMQSNFKAWCAGFAPLAVGGDMDSVAVQEFSRTLFN 635
           SPRYLND DYFGGFEQEDLDQLF+AM SN+K+WC+GFAP+AVGGDM+SVAVQEFSRTLFN
Sbjct: 121 SPRYLNDRDYFGGFEQEDLDQLFDAMASNYKSWCSGFAPMAVGGDMESVAVQEFSRTLFN 180

Query: 636 MRPDIALSVAKIIFMSDLRHLLCHVTVPCHIIQSMKDLAVPVVVSEYLHRNIGGESIVEV 815
           MRPDIALSV + IF SD+R +LC VTVPCHIIQSMKDLAVPVVV+EYLH+++G ESIVEV
Sbjct: 181 MRPDIALSVLQTIFKSDMRQILCMVTVPCHIIQSMKDLAVPVVVAEYLHQHVGSESIVEV 240

Query: 816 MSTDGHLPQLSSPDVVIPVLLRHIRNNI 899
           MST+GHLPQLSSPDVV+PV+L+HIR++I
Sbjct: 241 MSTEGHLPQLSSPDVVVPVILKHIRHDI 268


>ref|XP_002303383.1| predicted protein [Populus trichocarpa] gi|118489325|gb|ABK96467.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222840815|gb|EEE78362.1| predicted protein [Populus
           trichocarpa]
          Length = 270

 Score =  462 bits (1189), Expect = e-128
 Identities = 218/268 (81%), Positives = 252/268 (94%)
 Frame = +3

Query: 96  MGIVEAAHNVKVLGSGAETIVLAHGFGTDQSVWKHLVPHIVDDYRVILFDNMGAGTTNPD 275
           MGIVE AHN K+LGSG + IVLAHGFGTDQSVWKHL+PHIVD+Y+VIL+DNMGAGTTNPD
Sbjct: 1   MGIVEEAHNAKILGSGEQVIVLAHGFGTDQSVWKHLIPHIVDEYKVILYDNMGAGTTNPD 60

Query: 276 YFDFDRYSTLEGYAYDVIAILTELQVQSCIYVGHSVSAMIGSLASISRPDLFTKLILVSG 455
           YFDF+RYS+LEGYAYD++AIL EL+V+SCI V HSVS +IG++ASISRPDLF+K++++S 
Sbjct: 61  YFDFNRYSSLEGYAYDLLAILEELKVESCILVAHSVSGIIGAIASISRPDLFSKIVMLSA 120

Query: 456 SPRYLNDVDYFGGFEQEDLDQLFEAMQSNFKAWCAGFAPLAVGGDMDSVAVQEFSRTLFN 635
           SPRYLNDVDY+GGFEQEDLDQLFEAMQ+N+KAWC+GFAPLAVGGDMDSVAVQEFSRTLFN
Sbjct: 121 SPRYLNDVDYYGGFEQEDLDQLFEAMQNNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFN 180

Query: 636 MRPDIALSVAKIIFMSDLRHLLCHVTVPCHIIQSMKDLAVPVVVSEYLHRNIGGESIVEV 815
           MRPDIALSVA+ IF SD+R +L  VTVPCHI+QSMKDLAVPVV +EYLH+N+GGESIVEV
Sbjct: 181 MRPDIALSVAQTIFQSDMRSILHMVTVPCHILQSMKDLAVPVVAAEYLHQNLGGESIVEV 240

Query: 816 MSTDGHLPQLSSPDVVIPVLLRHIRNNI 899
           MS+DGHLPQLSSPD+VIPVLL+HIR NI
Sbjct: 241 MSSDGHLPQLSSPDIVIPVLLKHIRYNI 268