BLASTX nr result

ID: Cnidium21_contig00007511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007511
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324552.1| ABC transporter family protein [Populus tric...   364   6e-99
ref|XP_002523500.1| abc transporter, putative [Ricinus communis]...   363   1e-98
gb|ACD56627.1| putative ABC transporter [Gossypium raimondii]         361   7e-98
ref|XP_002886415.1| ATNAP10 [Arabidopsis lyrata subsp. lyrata] g...   349   3e-94
ref|NP_176516.1| ABC transporter I family member 1 [Arabidopsis ...   348   5e-94

>ref|XP_002324552.1| ABC transporter family protein [Populus trichocarpa]
           gi|222865986|gb|EEF03117.1| ABC transporter family
           protein [Populus trichocarpa]
          Length = 229

 Score =  364 bits (935), Expect = 6e-99
 Identities = 177/209 (84%), Positives = 192/209 (91%)
 Frame = -3

Query: 631 MRNAQQILRHVNVSIHDGGALVLTGTNGSGKSTFLRMLAGFSKPSAGEILWNGHDITESG 452
           MRNAQQILRHVNVS+HDGGALVLTG+NGSGKSTFLRMLAGFSKPSAG+ILWNGHD+TESG
Sbjct: 19  MRNAQQILRHVNVSVHDGGALVLTGSNGSGKSTFLRMLAGFSKPSAGQILWNGHDVTESG 78

Query: 451 IFHQYKLQLNWLSLKDAVKDKFTVLDNVQWFEVLEGKQGRSLPALELMGLGRLANDKARL 272
           +FHQYKLQLNWLSLKDA+K+KFTVLDNVQWFE+LEGKQG SLPA+ELMGLGRLA DKAR+
Sbjct: 79  VFHQYKLQLNWLSLKDAIKEKFTVLDNVQWFELLEGKQGNSLPAIELMGLGRLAKDKARM 138

Query: 271 LSMGXXXXXXXXXXXAIDRPIWLLDEPSVALDDDGVKLLEHIIAEHRKKGGIVIVATHLP 92
           LSMG           AIDRPIWLLDEPSVALDDDGV+LLE+IIA+HRKKGGIV VATHLP
Sbjct: 139 LSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVRLLEYIIAKHRKKGGIVFVATHLP 198

Query: 91  IQIEDAMYLRLPPRFPRRITFVDMLDRGD 5
           I IEDAMYLRLPPRFPRR+T VDMLDR +
Sbjct: 199 INIEDAMYLRLPPRFPRRMTLVDMLDRAE 227


>ref|XP_002523500.1| abc transporter, putative [Ricinus communis]
           gi|223537207|gb|EEF38839.1| abc transporter, putative
           [Ricinus communis]
          Length = 229

 Score =  363 bits (932), Expect = 1e-98
 Identities = 177/209 (84%), Positives = 192/209 (91%)
 Frame = -3

Query: 631 MRNAQQILRHVNVSIHDGGALVLTGTNGSGKSTFLRMLAGFSKPSAGEILWNGHDITESG 452
           MRNAQQILRHVNVSIHDGGALVLTG+NGSGK+TFLRMLAGFSKPSAG+ILWNGHD+TESG
Sbjct: 19  MRNAQQILRHVNVSIHDGGALVLTGSNGSGKTTFLRMLAGFSKPSAGQILWNGHDVTESG 78

Query: 451 IFHQYKLQLNWLSLKDAVKDKFTVLDNVQWFEVLEGKQGRSLPALELMGLGRLANDKARL 272
           +FHQYKLQLNWLSLKDA+K+KFTVLDNVQWFE+LEGKQG S+ ALELMGLGRLA DKAR+
Sbjct: 79  VFHQYKLQLNWLSLKDAIKEKFTVLDNVQWFEILEGKQGNSMRALELMGLGRLAKDKARM 138

Query: 271 LSMGXXXXXXXXXXXAIDRPIWLLDEPSVALDDDGVKLLEHIIAEHRKKGGIVIVATHLP 92
           LSMG           AIDRPIWLLDEPSVALDD+GV+LLE+IIAEHRKKGGIV VATHLP
Sbjct: 139 LSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDEGVRLLEYIIAEHRKKGGIVFVATHLP 198

Query: 91  IQIEDAMYLRLPPRFPRRITFVDMLDRGD 5
           I+IEDAMYLRLPPRFPRR+T VDMLDR D
Sbjct: 199 IEIEDAMYLRLPPRFPRRMTLVDMLDRAD 227


>gb|ACD56627.1| putative ABC transporter [Gossypium raimondii]
          Length = 251

 Score =  361 bits (926), Expect = 7e-98
 Identities = 178/209 (85%), Positives = 193/209 (92%)
 Frame = -3

Query: 631 MRNAQQILRHVNVSIHDGGALVLTGTNGSGKSTFLRMLAGFSKPSAGEILWNGHDITESG 452
           MRNAQQILRHVNVS+HDGGALVLTG+NGSGK+TFLRMLAGFS+PSAG+ILWNGHDI++SG
Sbjct: 41  MRNAQQILRHVNVSVHDGGALVLTGSNGSGKTTFLRMLAGFSRPSAGQILWNGHDISQSG 100

Query: 451 IFHQYKLQLNWLSLKDAVKDKFTVLDNVQWFEVLEGKQGRSLPALELMGLGRLANDKARL 272
           IFHQYKLQLNWLSLKDAVK+KFTVLDNVQWFEVLEGK G+SLPALELMGLGRLA DKAR+
Sbjct: 101 IFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEVLEGKHGKSLPALELMGLGRLAKDKARM 160

Query: 271 LSMGXXXXXXXXXXXAIDRPIWLLDEPSVALDDDGVKLLEHIIAEHRKKGGIVIVATHLP 92
           LSMG           AIDRPIWLLDEPSVALD++GV+LLE+IIAEHRKKGGIVIVATHLP
Sbjct: 161 LSMGQRKRLQLARLLAIDRPIWLLDEPSVALDNEGVRLLEYIIAEHRKKGGIVIVATHLP 220

Query: 91  IQIEDAMYLRLPPRFPRRITFVDMLDRGD 5
           IQIEDAM LRLPPRFPRR+T VDMLDR D
Sbjct: 221 IQIEDAMNLRLPPRFPRRMTLVDMLDRAD 249


>ref|XP_002886415.1| ATNAP10 [Arabidopsis lyrata subsp. lyrata]
           gi|297332256|gb|EFH62674.1| ATNAP10 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 229

 Score =  349 bits (895), Expect = 3e-94
 Identities = 170/209 (81%), Positives = 189/209 (90%)
 Frame = -3

Query: 631 MRNAQQILRHVNVSIHDGGALVLTGTNGSGKSTFLRMLAGFSKPSAGEILWNGHDITESG 452
           MRNAQQILRHVNVS+HDGGALVLTGTNGSGKSTFLRMLAGFSKPSAGEILWNGHDIT+SG
Sbjct: 19  MRNAQQILRHVNVSLHDGGALVLTGTNGSGKSTFLRMLAGFSKPSAGEILWNGHDITQSG 78

Query: 451 IFHQYKLQLNWLSLKDAVKDKFTVLDNVQWFEVLEGKQGRSLPALELMGLGRLANDKARL 272
           IF QYKLQLNW+SLKDA+K++FTVLDNVQWFE+LE K G++ PALELMGLGRL  +K+R+
Sbjct: 79  IFQQYKLQLNWISLKDAIKERFTVLDNVQWFELLENKIGKAQPALELMGLGRLVKEKSRM 138

Query: 271 LSMGXXXXXXXXXXXAIDRPIWLLDEPSVALDDDGVKLLEHIIAEHRKKGGIVIVATHLP 92
           LSMG           AIDRPIWLLDEPSVALDD+GV+LLE+IIAEHRKKGGIVIVATHLP
Sbjct: 139 LSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDEGVRLLEYIIAEHRKKGGIVIVATHLP 198

Query: 91  IQIEDAMYLRLPPRFPRRITFVDMLDRGD 5
           I+IEDAM LRLPPRFPR++T +DMLDR D
Sbjct: 199 IEIEDAMILRLPPRFPRKMTLIDMLDRAD 227


>ref|NP_176516.1| ABC transporter I family member 1 [Arabidopsis thaliana]
           gi|47605542|sp|Q9C8T1.1|AB1I_ARATH RecName: Full=ABC
           transporter I family member 1; Short=ABC transporter
           ABCI.1; Short=AtABCI1; AltName: Full=Cytochrome c
           biogenesis ATP-binding export protein ccmA-like;
           AltName: Full=MRP-related protein 3; AltName:
           Full=Putative non-intrinsic ABC protein 10
           gi|12324363|gb|AAG52155.1|AC022355_16 hypothetical
           protein; 38474-39163 [Arabidopsis thaliana]
           gi|332195959|gb|AEE34080.1| ABC transporter I family
           member 1 [Arabidopsis thaliana]
          Length = 229

 Score =  348 bits (893), Expect = 5e-94
 Identities = 170/209 (81%), Positives = 188/209 (89%)
 Frame = -3

Query: 631 MRNAQQILRHVNVSIHDGGALVLTGTNGSGKSTFLRMLAGFSKPSAGEILWNGHDITESG 452
           MRNAQQILRHVNVS+HDGGALVLTGTNGSGKSTFLRMLAGFSKPSAGEILWNGHDIT+SG
Sbjct: 19  MRNAQQILRHVNVSLHDGGALVLTGTNGSGKSTFLRMLAGFSKPSAGEILWNGHDITQSG 78

Query: 451 IFHQYKLQLNWLSLKDAVKDKFTVLDNVQWFEVLEGKQGRSLPALELMGLGRLANDKARL 272
           IF QYKLQLNW+SLKDA+K++FTVLDNVQWFE+LE K G++ PALELMGLGRL  +K+R+
Sbjct: 79  IFQQYKLQLNWISLKDAIKERFTVLDNVQWFELLENKIGKAQPALELMGLGRLVKEKSRM 138

Query: 271 LSMGXXXXXXXXXXXAIDRPIWLLDEPSVALDDDGVKLLEHIIAEHRKKGGIVIVATHLP 92
           LSMG           AIDRPIWLLDEPSVALDD+GV+LLE+IIAEHRKKGGIVIVATHLP
Sbjct: 139 LSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDEGVRLLEYIIAEHRKKGGIVIVATHLP 198

Query: 91  IQIEDAMYLRLPPRFPRRITFVDMLDRGD 5
           I IEDAM LRLPPRFPR++T +DMLDR D
Sbjct: 199 IDIEDAMILRLPPRFPRKMTLIDMLDRAD 227


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