BLASTX nr result

ID: Cnidium21_contig00007510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007510
         (933 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324552.1| ABC transporter family protein [Populus tric...   326   6e-87
ref|XP_002523500.1| abc transporter, putative [Ricinus communis]...   323   3e-86
gb|ACD56627.1| putative ABC transporter [Gossypium raimondii]         323   5e-86
ref|XP_002886415.1| ATNAP10 [Arabidopsis lyrata subsp. lyrata] g...   318   1e-84
ref|NP_176516.1| ABC transporter I family member 1 [Arabidopsis ...   317   3e-84

>ref|XP_002324552.1| ABC transporter family protein [Populus trichocarpa]
           gi|222865986|gb|EEF03117.1| ABC transporter family
           protein [Populus trichocarpa]
          Length = 229

 Score =  326 bits (835), Expect = 6e-87
 Identities = 158/187 (84%), Positives = 173/187 (92%)
 Frame = -1

Query: 561 NVSCMRNAQQILRHVNVSVHDGGALVLTGTNGSGKSTFLRMLAGFSKPSAGEILWNGHDI 382
           NVSCMRNAQQILRHVNVSVHDGGALVLTG+NGSGKSTFLRMLAGFSKPSAG+ILWNGHD+
Sbjct: 15  NVSCMRNAQQILRHVNVSVHDGGALVLTGSNGSGKSTFLRMLAGFSKPSAGQILWNGHDV 74

Query: 381 TDSGIFHQYKLQLNWLSLKDAVKDKFTVLDNVQWFEVLEGKEGRALPALELMGLGRLAKD 202
           T+SG+FHQYKLQLNWLSLKDA+K+KFTVLDNVQWFE+LEGK+G +LPA+ELMGLGRLAKD
Sbjct: 75  TESGVFHQYKLQLNWLSLKDAIKEKFTVLDNVQWFELLEGKQGNSLPAIELMGLGRLAKD 134

Query: 201 KARLLSMGXXXXXXXXXXXAIDRPIWLLDEPSVALDDDGVKLLEHIIAEHRKKGGIVIVA 22
           KAR+LSMG           AIDRPIWLLDEPSVALDDDGV+LLE+IIA+HRKKGGIV VA
Sbjct: 135 KARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVRLLEYIIAKHRKKGGIVFVA 194

Query: 21  THLPIEI 1
           THLPI I
Sbjct: 195 THLPINI 201


>ref|XP_002523500.1| abc transporter, putative [Ricinus communis]
           gi|223537207|gb|EEF38839.1| abc transporter, putative
           [Ricinus communis]
          Length = 229

 Score =  323 bits (829), Expect = 3e-86
 Identities = 156/187 (83%), Positives = 173/187 (92%)
 Frame = -1

Query: 561 NVSCMRNAQQILRHVNVSVHDGGALVLTGTNGSGKSTFLRMLAGFSKPSAGEILWNGHDI 382
           NVSCMRNAQQILRHVNVS+HDGGALVLTG+NGSGK+TFLRMLAGFSKPSAG+ILWNGHD+
Sbjct: 15  NVSCMRNAQQILRHVNVSIHDGGALVLTGSNGSGKTTFLRMLAGFSKPSAGQILWNGHDV 74

Query: 381 TDSGIFHQYKLQLNWLSLKDAVKDKFTVLDNVQWFEVLEGKEGRALPALELMGLGRLAKD 202
           T+SG+FHQYKLQLNWLSLKDA+K+KFTVLDNVQWFE+LEGK+G ++ ALELMGLGRLAKD
Sbjct: 75  TESGVFHQYKLQLNWLSLKDAIKEKFTVLDNVQWFEILEGKQGNSMRALELMGLGRLAKD 134

Query: 201 KARLLSMGXXXXXXXXXXXAIDRPIWLLDEPSVALDDDGVKLLEHIIAEHRKKGGIVIVA 22
           KAR+LSMG           AIDRPIWLLDEPSVALDD+GV+LLE+IIAEHRKKGGIV VA
Sbjct: 135 KARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDEGVRLLEYIIAEHRKKGGIVFVA 194

Query: 21  THLPIEI 1
           THLPIEI
Sbjct: 195 THLPIEI 201


>gb|ACD56627.1| putative ABC transporter [Gossypium raimondii]
          Length = 251

 Score =  323 bits (827), Expect = 5e-86
 Identities = 159/187 (85%), Positives = 174/187 (93%)
 Frame = -1

Query: 561 NVSCMRNAQQILRHVNVSVHDGGALVLTGTNGSGKSTFLRMLAGFSKPSAGEILWNGHDI 382
           +VSCMRNAQQILRHVNVSVHDGGALVLTG+NGSGK+TFLRMLAGFS+PSAG+ILWNGHDI
Sbjct: 37  DVSCMRNAQQILRHVNVSVHDGGALVLTGSNGSGKTTFLRMLAGFSRPSAGQILWNGHDI 96

Query: 381 TDSGIFHQYKLQLNWLSLKDAVKDKFTVLDNVQWFEVLEGKEGRALPALELMGLGRLAKD 202
           + SGIFHQYKLQLNWLSLKDAVK+KFTVLDNVQWFEVLEGK G++LPALELMGLGRLAKD
Sbjct: 97  SQSGIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEVLEGKHGKSLPALELMGLGRLAKD 156

Query: 201 KARLLSMGXXXXXXXXXXXAIDRPIWLLDEPSVALDDDGVKLLEHIIAEHRKKGGIVIVA 22
           KAR+LSMG           AIDRPIWLLDEPSVALD++GV+LLE+IIAEHRKKGGIVIVA
Sbjct: 157 KARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDNEGVRLLEYIIAEHRKKGGIVIVA 216

Query: 21  THLPIEI 1
           THLPI+I
Sbjct: 217 THLPIQI 223


>ref|XP_002886415.1| ATNAP10 [Arabidopsis lyrata subsp. lyrata]
           gi|297332256|gb|EFH62674.1| ATNAP10 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 229

 Score =  318 bits (814), Expect = 1e-84
 Identities = 157/187 (83%), Positives = 170/187 (90%)
 Frame = -1

Query: 561 NVSCMRNAQQILRHVNVSVHDGGALVLTGTNGSGKSTFLRMLAGFSKPSAGEILWNGHDI 382
           NVSCMRNAQQILRHVNVS+HDGGALVLTGTNGSGKSTFLRMLAGFSKPSAGEILWNGHDI
Sbjct: 15  NVSCMRNAQQILRHVNVSLHDGGALVLTGTNGSGKSTFLRMLAGFSKPSAGEILWNGHDI 74

Query: 381 TDSGIFHQYKLQLNWLSLKDAVKDKFTVLDNVQWFEVLEGKEGRALPALELMGLGRLAKD 202
           T SGIF QYKLQLNW+SLKDA+K++FTVLDNVQWFE+LE K G+A PALELMGLGRL K+
Sbjct: 75  TQSGIFQQYKLQLNWISLKDAIKERFTVLDNVQWFELLENKIGKAQPALELMGLGRLVKE 134

Query: 201 KARLLSMGXXXXXXXXXXXAIDRPIWLLDEPSVALDDDGVKLLEHIIAEHRKKGGIVIVA 22
           K+R+LSMG           AIDRPIWLLDEPSVALDD+GV+LLE+IIAEHRKKGGIVIVA
Sbjct: 135 KSRMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDEGVRLLEYIIAEHRKKGGIVIVA 194

Query: 21  THLPIEI 1
           THLPIEI
Sbjct: 195 THLPIEI 201


>ref|NP_176516.1| ABC transporter I family member 1 [Arabidopsis thaliana]
           gi|47605542|sp|Q9C8T1.1|AB1I_ARATH RecName: Full=ABC
           transporter I family member 1; Short=ABC transporter
           ABCI.1; Short=AtABCI1; AltName: Full=Cytochrome c
           biogenesis ATP-binding export protein ccmA-like;
           AltName: Full=MRP-related protein 3; AltName:
           Full=Putative non-intrinsic ABC protein 10
           gi|12324363|gb|AAG52155.1|AC022355_16 hypothetical
           protein; 38474-39163 [Arabidopsis thaliana]
           gi|332195959|gb|AEE34080.1| ABC transporter I family
           member 1 [Arabidopsis thaliana]
          Length = 229

 Score =  317 bits (811), Expect = 3e-84
 Identities = 156/187 (83%), Positives = 170/187 (90%)
 Frame = -1

Query: 561 NVSCMRNAQQILRHVNVSVHDGGALVLTGTNGSGKSTFLRMLAGFSKPSAGEILWNGHDI 382
           NVSCMRNAQQILRHVNVS+HDGGALVLTGTNGSGKSTFLRMLAGFSKPSAGEILWNGHDI
Sbjct: 15  NVSCMRNAQQILRHVNVSLHDGGALVLTGTNGSGKSTFLRMLAGFSKPSAGEILWNGHDI 74

Query: 381 TDSGIFHQYKLQLNWLSLKDAVKDKFTVLDNVQWFEVLEGKEGRALPALELMGLGRLAKD 202
           T SGIF QYKLQLNW+SLKDA+K++FTVLDNVQWFE+LE K G+A PALELMGLGRL K+
Sbjct: 75  TQSGIFQQYKLQLNWISLKDAIKERFTVLDNVQWFELLENKIGKAQPALELMGLGRLVKE 134

Query: 201 KARLLSMGXXXXXXXXXXXAIDRPIWLLDEPSVALDDDGVKLLEHIIAEHRKKGGIVIVA 22
           K+R+LSMG           AIDRPIWLLDEPSVALDD+GV+LLE+IIAEHRKKGGIVIVA
Sbjct: 135 KSRMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDEGVRLLEYIIAEHRKKGGIVIVA 194

Query: 21  THLPIEI 1
           THLPI+I
Sbjct: 195 THLPIDI 201


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