BLASTX nr result

ID: Cnidium21_contig00007495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007495
         (1571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65915.1| hypothetical protein VITISV_000065 [Vitis vinifera]   544   e-152
gb|AFG17072.1| GID1A [Vitis vinifera]                                 543   e-152
emb|CBI34320.3| unnamed protein product [Vitis vinifera]              541   e-151
ref|XP_002265764.1| PREDICTED: gibberellin receptor GID1C-like [...   541   e-151
ref|XP_002512310.1| Gibberellin receptor GID1, putative [Ricinus...   538   e-150

>emb|CAN65915.1| hypothetical protein VITISV_000065 [Vitis vinifera]
          Length = 344

 Score =  544 bits (1402), Expect = e-152
 Identities = 259/330 (78%), Positives = 287/330 (86%), Gaps = 1/330 (0%)
 Frame = +1

Query: 178  VVPLNTWILISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPSNFNPVNGVFSFDMIIDRPT 357
            VVPLNTWILISNFKLAYNLLRRPDGTFNRHLAEFLDRKVP+N NPV GVFSFD+IIDR T
Sbjct: 15   VVPLNTWILISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVEGVFSFDVIIDRST 74

Query: 358  SLLTRIYRPVEAAEEAPRFPDLEKPLSSDIVPVIIFXXXXXXXXXXXXXXIYDSLCRRLV 537
            SLL+RIYRP    E  P   +LEKP++ DIVPVI+F              IYD+LCRRLV
Sbjct: 75   SLLSRIYRPATGEEALPSIMELEKPVTGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLV 134

Query: 538  GLCNAVVISVNYRRAPEDPYPCAYDDGWTALRWVHSKTWLQSQ-DSKVHIFLAGDSSGGN 714
            G+C AVV+SVNYRRAPE+PYPCAYDDGW AL+WV+S+ WL+S+ DSKVHI++ GDSSGGN
Sbjct: 135  GICKAVVVSVNYRRAPENPYPCAYDDGWAALKWVNSRPWLKSEEDSKVHIYMVGDSSGGN 194

Query: 715  IVHNVALKAAESGIEVIGNILLNPMFGGEERTKSEKRLDGKYFVTVRDRDWYWRAFLPEG 894
            IVHNVALKA ESGIEV+GNILLNPMFGG+ERT+SEKRLDGKYFVT++DRDWYWRAFLPEG
Sbjct: 195  IVHNVALKAVESGIEVLGNILLNPMFGGQERTESEKRLDGKYFVTIQDRDWYWRAFLPEG 254

Query: 895  EDRDHPACNPFGPKATSIVGIKFPKSLVVVAGLDLVQDWQLAYAEGLKKADHKVKLLYLE 1074
            EDRDH ACNPFGP   S+VG+KFPKSLVVVAGLDLVQDWQLAY EGLKKA  +VK LYL+
Sbjct: 255  EDRDHAACNPFGPNGKSLVGMKFPKSLVVVAGLDLVQDWQLAYVEGLKKAGQEVKHLYLD 314

Query: 1075 KATIGFYLLPNNDHFYTVMDEIQNFVCSDC 1164
            KATIGFYLLPNNDHFYTVMDEI NFV S+C
Sbjct: 315  KATIGFYLLPNNDHFYTVMDEISNFVSSNC 344


>gb|AFG17072.1| GID1A [Vitis vinifera]
          Length = 344

 Score =  543 bits (1399), Expect = e-152
 Identities = 258/330 (78%), Positives = 287/330 (86%), Gaps = 1/330 (0%)
 Frame = +1

Query: 178  VVPLNTWILISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPSNFNPVNGVFSFDMIIDRPT 357
            VVPLNTWILISNFKLAYNLLRRPDGTFNRHLAEFLDRKVP+N NPV GVFSFD+IIDR T
Sbjct: 15   VVPLNTWILISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVEGVFSFDVIIDRST 74

Query: 358  SLLTRIYRPVEAAEEAPRFPDLEKPLSSDIVPVIIFXXXXXXXXXXXXXXIYDSLCRRLV 537
            SLL+RIYRP    E  P   +LEKP++ DIVPVI+F              IYD+LCRRLV
Sbjct: 75   SLLSRIYRPATGEEALPSIMELEKPVTGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLV 134

Query: 538  GLCNAVVISVNYRRAPEDPYPCAYDDGWTALRWVHSKTWLQSQ-DSKVHIFLAGDSSGGN 714
            G+C AVV+SVNYRRAPE+PYPCAYDDGW AL+WV+S+ WL+S+ DSKVHI++ GDSSGGN
Sbjct: 135  GICKAVVVSVNYRRAPENPYPCAYDDGWAALKWVNSRPWLKSEEDSKVHIYMVGDSSGGN 194

Query: 715  IVHNVALKAAESGIEVIGNILLNPMFGGEERTKSEKRLDGKYFVTVRDRDWYWRAFLPEG 894
            IVHNVALKA ESGIEV+GNILLNPMFGG+ERT+SEKRLDGKYFVT++DRDWYWRAFLPEG
Sbjct: 195  IVHNVALKAVESGIEVLGNILLNPMFGGQERTESEKRLDGKYFVTIQDRDWYWRAFLPEG 254

Query: 895  EDRDHPACNPFGPKATSIVGIKFPKSLVVVAGLDLVQDWQLAYAEGLKKADHKVKLLYLE 1074
            EDRDH ACNPFGP   S+VG+KFPKSLVVVAGLDLVQDWQLAY EGLKKA  +V+ LYL+
Sbjct: 255  EDRDHAACNPFGPNGKSLVGMKFPKSLVVVAGLDLVQDWQLAYVEGLKKAGQEVRHLYLD 314

Query: 1075 KATIGFYLLPNNDHFYTVMDEIQNFVCSDC 1164
            KATIGFYLLPNNDHFYTVMDEI NFV S+C
Sbjct: 315  KATIGFYLLPNNDHFYTVMDEISNFVSSNC 344


>emb|CBI34320.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score =  541 bits (1394), Expect = e-151
 Identities = 258/335 (77%), Positives = 289/335 (86%), Gaps = 1/335 (0%)
 Frame = +1

Query: 178  VVPLNTWILISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPSNFNPVNGVFSFDMIIDRPT 357
            VVPLNTWILISNFKLAYNLLRRPDGTFNRHLAEFLDRKVP+N NPV GVFSFD+IIDR T
Sbjct: 15   VVPLNTWILISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVEGVFSFDVIIDRST 74

Query: 358  SLLTRIYRPVEAAEEAPRFPDLEKPLSSDIVPVIIFXXXXXXXXXXXXXXIYDSLCRRLV 537
            SLL+RIYRP    E  P   +LEKP++ DIVPVI+F              IYD+LCRRLV
Sbjct: 75   SLLSRIYRPATGEEALPSIMELEKPVTGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLV 134

Query: 538  GLCNAVVISVNYRRAPEDPYPCAYDDGWTALRWVHSKTWLQSQ-DSKVHIFLAGDSSGGN 714
            G+C AVV+SVNYRRAPE+PYPCAYDDGW AL+WV+S+ WL+S+ DSKVHI++ GDSSGGN
Sbjct: 135  GICKAVVVSVNYRRAPENPYPCAYDDGWAALKWVNSRPWLKSEEDSKVHIYMVGDSSGGN 194

Query: 715  IVHNVALKAAESGIEVIGNILLNPMFGGEERTKSEKRLDGKYFVTVRDRDWYWRAFLPEG 894
            IVHNVALKA ESGIEV+GNILLNPMFGG+ERT+SEKRLDGKYFVT++DRDWYWRAFLPEG
Sbjct: 195  IVHNVALKAVESGIEVLGNILLNPMFGGQERTESEKRLDGKYFVTIQDRDWYWRAFLPEG 254

Query: 895  EDRDHPACNPFGPKATSIVGIKFPKSLVVVAGLDLVQDWQLAYAEGLKKADHKVKLLYLE 1074
            EDRDH ACNPFGP   S+VG+KFPKSLVVVAGLDLVQDWQLAY EGLKKA  +VK LYL+
Sbjct: 255  EDRDHAACNPFGPNGKSLVGMKFPKSLVVVAGLDLVQDWQLAYVEGLKKAGQEVKHLYLD 314

Query: 1075 KATIGFYLLPNNDHFYTVMDEIQNFVCSDCSIDQL 1179
            KATIGFYLLPNNDHFYTVMDEI NF+    S+++L
Sbjct: 315  KATIGFYLLPNNDHFYTVMDEISNFMLKMISLERL 349


>ref|XP_002265764.1| PREDICTED: gibberellin receptor GID1C-like [Vitis vinifera]
          Length = 360

 Score =  541 bits (1394), Expect = e-151
 Identities = 258/335 (77%), Positives = 289/335 (86%), Gaps = 1/335 (0%)
 Frame = +1

Query: 178  VVPLNTWILISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPSNFNPVNGVFSFDMIIDRPT 357
            VVPLNTWILISNFKLAYNLLRRPDGTFNRHLAEFLDRKVP+N NPV GVFSFD+IIDR T
Sbjct: 15   VVPLNTWILISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVEGVFSFDVIIDRST 74

Query: 358  SLLTRIYRPVEAAEEAPRFPDLEKPLSSDIVPVIIFXXXXXXXXXXXXXXIYDSLCRRLV 537
            SLL+RIYRP    E  P   +LEKP++ DIVPVI+F              IYD+LCRRLV
Sbjct: 75   SLLSRIYRPATGEEALPSIMELEKPVTGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLV 134

Query: 538  GLCNAVVISVNYRRAPEDPYPCAYDDGWTALRWVHSKTWLQSQ-DSKVHIFLAGDSSGGN 714
            G+C AVV+SVNYRRAPE+PYPCAYDDGW AL+WV+S+ WL+S+ DSKVHI++ GDSSGGN
Sbjct: 135  GICKAVVVSVNYRRAPENPYPCAYDDGWAALKWVNSRPWLKSEEDSKVHIYMVGDSSGGN 194

Query: 715  IVHNVALKAAESGIEVIGNILLNPMFGGEERTKSEKRLDGKYFVTVRDRDWYWRAFLPEG 894
            IVHNVALKA ESGIEV+GNILLNPMFGG+ERT+SEKRLDGKYFVT++DRDWYWRAFLPEG
Sbjct: 195  IVHNVALKAVESGIEVLGNILLNPMFGGQERTESEKRLDGKYFVTIQDRDWYWRAFLPEG 254

Query: 895  EDRDHPACNPFGPKATSIVGIKFPKSLVVVAGLDLVQDWQLAYAEGLKKADHKVKLLYLE 1074
            EDRDH ACNPFGP   S+VG+KFPKSLVVVAGLDLVQDWQLAY EGLKKA  +VK LYL+
Sbjct: 255  EDRDHAACNPFGPNGKSLVGMKFPKSLVVVAGLDLVQDWQLAYVEGLKKAGQEVKHLYLD 314

Query: 1075 KATIGFYLLPNNDHFYTVMDEIQNFVCSDCSIDQL 1179
            KATIGFYLLPNNDHFYTVMDEI NF+    S+++L
Sbjct: 315  KATIGFYLLPNNDHFYTVMDEISNFMLKMISLERL 349


>ref|XP_002512310.1| Gibberellin receptor GID1, putative [Ricinus communis]
            gi|223548271|gb|EEF49762.1| Gibberellin receptor GID1,
            putative [Ricinus communis]
          Length = 344

 Score =  538 bits (1387), Expect = e-150
 Identities = 254/331 (76%), Positives = 290/331 (87%), Gaps = 1/331 (0%)
 Frame = +1

Query: 175  MVVPLNTWILISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPSNFNPVNGVFSFDMIIDRP 354
            MVVPLNTW+LISNFKLAYNLLRRPDGTFNRHLAEFLDRKVP N NPV+GVFSFD++IDR 
Sbjct: 14   MVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPPNANPVDGVFSFDVVIDRG 73

Query: 355  TSLLTRIYRPVEAAEEAPRFPDLEKPLSSDIVPVIIFXXXXXXXXXXXXXXIYDSLCRRL 534
            TSLL+RIYRP E  +  P   +LEKP++SD+VPVI+F              IYD+LCRRL
Sbjct: 74   TSLLSRIYRPAEGEQLQPNIAELEKPVTSDVVPVILFFHGGSFAHSSANSAIYDTLCRRL 133

Query: 535  VGLCNAVVISVNYRRAPEDPYPCAYDDGWTALRWVHSKTWLQSQ-DSKVHIFLAGDSSGG 711
            VG+C AVV+SVNYRRAPE+ YPCAYDDGWTAL+WV+S+TWL+S+ D+KVH++LAGDSSGG
Sbjct: 134  VGICRAVVVSVNYRRAPENRYPCAYDDGWTALKWVNSRTWLESKKDAKVHMYLAGDSSGG 193

Query: 712  NIVHNVALKAAESGIEVIGNILLNPMFGGEERTKSEKRLDGKYFVTVRDRDWYWRAFLPE 891
            NIVH+VAL+A ESGIEV+GNILLNPMFGG+ERT+SEKRLDGKYFVTV+DRDWYWRAFLPE
Sbjct: 194  NIVHHVALRALESGIEVLGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAFLPE 253

Query: 892  GEDRDHPACNPFGPKATSIVGIKFPKSLVVVAGLDLVQDWQLAYAEGLKKADHKVKLLYL 1071
              DRDHPACNPFGPK  S+ G+KFPKSLVVVAGLDL+QDWQLAY EGLKKA   VKLLYL
Sbjct: 254  EADRDHPACNPFGPKGRSLEGMKFPKSLVVVAGLDLIQDWQLAYVEGLKKAGQVVKLLYL 313

Query: 1072 EKATIGFYLLPNNDHFYTVMDEIQNFVCSDC 1164
            E+ATIGFYLLPNN+HF+TVMDEI  FVC +C
Sbjct: 314  EQATIGFYLLPNNNHFHTVMDEISEFVCPNC 344


Top