BLASTX nr result

ID: Cnidium21_contig00007469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007469
         (744 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42127.1| unknown [Medicago truncatula]                          222   6e-56
ref|XP_002327540.1| predicted protein [Populus trichocarpa] gi|2...   222   6e-56
ref|XP_003597619.1| DEAD-box ATP-dependent RNA helicase [Medicag...   222   6e-56
ref|NP_001142117.1| uncharacterized protein LOC100274281 [Zea ma...   221   1e-55
ref|XP_002279117.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   220   2e-55

>gb|AFK42127.1| unknown [Medicago truncatula]
          Length = 499

 Score =  222 bits (566), Expect = 6e-56
 Identities = 111/128 (86%), Positives = 115/128 (89%)
 Frame = +2

Query: 2   ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAAR 181
           ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFK+GKSPIMTATDVAAR
Sbjct: 343 ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAAR 402

Query: 182 GLDVKDVMYVINYDFPGSLEDYVHRIXXXXXXXXXXXXYSFFTAANARFAKELITILEEA 361
           GLDVKDV YVINYDFPGSLEDYVHRI            Y+FFTAANARFAKELI+ILEEA
Sbjct: 403 GLDVKDVKYVINYDFPGSLEDYVHRIGKTGRAGAKGTAYTFFTAANARFAKELISILEEA 462

Query: 362 GQKVSSEL 385
           GQ+VSSEL
Sbjct: 463 GQRVSSEL 470


>ref|XP_002327540.1| predicted protein [Populus trichocarpa] gi|222836094|gb|EEE74515.1|
           predicted protein [Populus trichocarpa]
          Length = 497

 Score =  222 bits (566), Expect = 6e-56
 Identities = 111/128 (86%), Positives = 113/128 (88%)
 Frame = +2

Query: 2   ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAAR 181
           ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAAR
Sbjct: 339 ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAAR 398

Query: 182 GLDVKDVMYVINYDFPGSLEDYVHRIXXXXXXXXXXXXYSFFTAANARFAKELITILEEA 361
           GLDVKDV YVINYDFPGSLEDYVHRI            Y+FFTA NARFAKEL+TILEEA
Sbjct: 399 GLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAGNARFAKELVTILEEA 458

Query: 362 GQKVSSEL 385
           GQKVS EL
Sbjct: 459 GQKVSPEL 466


>ref|XP_003597619.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|358344685|ref|XP_003636418.1| DEAD-box ATP-dependent
           RNA helicase [Medicago truncatula]
           gi|124360402|gb|ABN08415.1| Helicase, C-terminal
           [Medicago truncatula] gi|355486667|gb|AES67870.1|
           DEAD-box ATP-dependent RNA helicase [Medicago
           truncatula] gi|355502353|gb|AES83556.1| DEAD-box
           ATP-dependent RNA helicase [Medicago truncatula]
          Length = 499

 Score =  222 bits (566), Expect = 6e-56
 Identities = 111/128 (86%), Positives = 115/128 (89%)
 Frame = +2

Query: 2   ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAAR 181
           ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFK+GKSPIMTATDVAAR
Sbjct: 343 ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAAR 402

Query: 182 GLDVKDVMYVINYDFPGSLEDYVHRIXXXXXXXXXXXXYSFFTAANARFAKELITILEEA 361
           GLDVKDV YVINYDFPGSLEDYVHRI            Y+FFTAANARFAKELI+ILEEA
Sbjct: 403 GLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELISILEEA 462

Query: 362 GQKVSSEL 385
           GQ+VSSEL
Sbjct: 463 GQRVSSEL 470


>ref|NP_001142117.1| uncharacterized protein LOC100274281 [Zea mays]
           gi|194704910|gb|ACF86539.1| unknown [Zea mays]
           gi|194707190|gb|ACF87679.1| unknown [Zea mays]
           gi|414875847|tpg|DAA52978.1| TPA: putative DEAD-box
           ATP-dependent RNA helicase family protein [Zea mays]
          Length = 494

 Score =  221 bits (563), Expect = 1e-55
 Identities = 111/128 (86%), Positives = 113/128 (88%)
 Frame = +2

Query: 2   ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAAR 181
           ILIFMDTKKGCDQ TRQLRMDGWPALSIHGDKSQAERDWVLSEFK+GKSPIMTATDVAAR
Sbjct: 339 ILIFMDTKKGCDQTTRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAAR 398

Query: 182 GLDVKDVMYVINYDFPGSLEDYVHRIXXXXXXXXXXXXYSFFTAANARFAKELITILEEA 361
           GLDVKDV YVINYDFPGSLEDYVHRI            Y+FFTAANARFAKELI ILEEA
Sbjct: 399 GLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELINILEEA 458

Query: 362 GQKVSSEL 385
           GQKVSSEL
Sbjct: 459 GQKVSSEL 466


>ref|XP_002279117.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20 [Vitis vinifera]
           gi|297743075|emb|CBI35942.3| unnamed protein product
           [Vitis vinifera]
          Length = 506

 Score =  220 bits (561), Expect = 2e-55
 Identities = 110/128 (85%), Positives = 114/128 (89%)
 Frame = +2

Query: 2   ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAAR 181
           ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAAR
Sbjct: 348 ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAAR 407

Query: 182 GLDVKDVMYVINYDFPGSLEDYVHRIXXXXXXXXXXXXYSFFTAANARFAKELITILEEA 361
           GLDVKDV +VINYDFPGSLEDYVHRI            Y+FFTAANARFAKELITILEEA
Sbjct: 408 GLDVKDVKFVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELITILEEA 467

Query: 362 GQKVSSEL 385
           GQ+V+ EL
Sbjct: 468 GQRVAPEL 475


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