BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007421
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271666.1| PREDICTED: photosystem II reaction center PS...    67   1e-09
ref|NP_001235805.1| uncharacterized protein LOC100306491 [Glycin...    64   1e-08
ref|XP_003537110.1| PREDICTED: photosystem II reaction center PS...    61   1e-07
ref|XP_002526538.1| Photosystem II reaction center W protein, pu...    61   1e-07
gb|ABK95843.1| unknown [Populus trichocarpa]                           58   9e-07

>ref|XP_002271666.1| PREDICTED: photosystem II reaction center PSB28 protein,
           chloroplastic [Vitis vinifera]
           gi|297744226|emb|CBI37196.3| unnamed protein product
           [Vitis vinifera]
          Length = 179

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 40/78 (51%), Positives = 51/78 (65%)
 Frame = +2

Query: 68  AGITSGAMISSVRSTFSRQTLHLSCSQCAPQRRKCQMSRLSINYNDGQTIDSILGTDEQT 247
           +G++S A+  S  S+F+ ++LHL   Q A  +R    S L I      TI  I GTDEQT
Sbjct: 23  SGLSSWAVHRSAHSSFNGRSLHLPRPQWAALKRSSSTSGL-ITMMVKPTIQFIQGTDEQT 81

Query: 248 VPDVKLTKSRDGTNGMAI 301
           VPDV+LT+SRDGTNGMAI
Sbjct: 82  VPDVRLTQSRDGTNGMAI 99


>ref|NP_001235805.1| uncharacterized protein LOC100306491 [Glycine max]
           gi|255628701|gb|ACU14695.1| unknown [Glycine max]
          Length = 179

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/76 (47%), Positives = 46/76 (60%)
 Frame = +2

Query: 74  ITSGAMISSVRSTFSRQTLHLSCSQCAPQRRKCQMSRLSINYNDGQTIDSILGTDEQTVP 253
           + S  +  S  S+F+ QTLHL C +    R+   M  + +       I  I GTDEQT+P
Sbjct: 25  VPSSIVHQSTNSSFNGQTLHLPCLRLPVLRQNTPM-HMPVIMMVKPKIQFIQGTDEQTIP 83

Query: 254 DVKLTKSRDGTNGMAI 301
           DV+LTKSRDGTNGMAI
Sbjct: 84  DVRLTKSRDGTNGMAI 99


>ref|XP_003537110.1| PREDICTED: photosystem II reaction center PSB28 protein,
           chloroplastic-like [Glycine max]
          Length = 179

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/76 (44%), Positives = 45/76 (59%)
 Frame = +2

Query: 74  ITSGAMISSVRSTFSRQTLHLSCSQCAPQRRKCQMSRLSINYNDGQTIDSILGTDEQTVP 253
           + S  +  S  S+F+ QTL + C +    R+   M  + +       I  I GTDEQT+P
Sbjct: 25  VPSSIVHQSTNSSFNGQTLRMPCLRLPVLRQSTPM-HMPVIMMAKPKIQFIQGTDEQTIP 83

Query: 254 DVKLTKSRDGTNGMAI 301
           DV+LTKSRDGTNGMAI
Sbjct: 84  DVRLTKSRDGTNGMAI 99


>ref|XP_002526538.1| Photosystem II reaction center W protein, putative [Ricinus
           communis] gi|223534099|gb|EEF35816.1| Photosystem II
           reaction center W protein, putative [Ricinus communis]
          Length = 178

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 39/83 (46%), Positives = 47/83 (56%)
 Frame = +2

Query: 53  QVLCYAGITSGAMISSVRSTFSRQTLHLSCSQCAPQRRKCQMSRLSINYNDGQTIDSILG 232
           Q   + G    A+    RS FS ++L LS  Q    R+K   S   I      +I  I G
Sbjct: 19  QTRSFPGSFCWAVHRIARSPFSGKSLRLSHPQLTSTRQK---SSRFITMMAKPSIQFIQG 75

Query: 233 TDEQTVPDVKLTKSRDGTNGMAI 301
           TDEQT+PDV+LTKSRDGTNGMAI
Sbjct: 76  TDEQTIPDVRLTKSRDGTNGMAI 98


>gb|ABK95843.1| unknown [Populus trichocarpa]
          Length = 181

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 38/83 (45%), Positives = 48/83 (57%)
 Frame = +2

Query: 53  QVLCYAGITSGAMISSVRSTFSRQTLHLSCSQCAPQRRKCQMSRLSINYNDGQTIDSILG 232
           Q   ++G  S A+  S  S F+ Q+L L   +    RRK + S L +       I  + G
Sbjct: 20  QTRSFSGSGSWAVNKSSYSLFNGQSLCLPRLRLPLIRRKLRTSGL-VTMMVKPAIQFVQG 78

Query: 233 TDEQTVPDVKLTKSRDGTNGMAI 301
            DEQTVPDV+LTKSRDGTNGMAI
Sbjct: 79  ADEQTVPDVRLTKSRDGTNGMAI 101