BLASTX nr result

ID: Cnidium21_contig00007395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007395
         (1312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ98843.1| predicted protein [Hordeum vulgare subsp. vulgare]     63   1e-07
gb|EEC76822.1| hypothetical protein OsI_14961 [Oryza sativa Indi...    62   3e-07
ref|XP_003605042.1| F-box/kelch-repeat protein [Medicago truncat...    60   1e-06
gb|EEC84673.1| hypothetical protein OsI_31582 [Oryza sativa Indi...    60   1e-06
ref|NP_001063316.2| Os09g0448100 [Oryza sativa Japonica Group] g...    59   4e-06

>dbj|BAJ98843.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 399

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 81/317 (25%), Positives = 130/317 (41%), Gaps = 15/317 (4%)
 Frame = -2

Query: 1212 EPVPEDILIEIFSRMPAECLHQCKQAYEDWNTLCSTSHFNHNLFLQRASPTIIVHRGSLT 1033
            E +PEDI+ +I   +P++ + +C+       +  ST  F      ++ S  I+   G   
Sbjct: 11   EDLPEDIINKILVLLPSKDVGRCRVVNTSMCSATSTPEFMLQHHRRQPSLPIVDGLGRPA 70

Query: 1032 GHKLFYVDDDNRGGLKSTQISLGDRNMPLDHSPSWLPINQFTPVKFTCYGLIFLEAAWPH 853
             H    V  D   G  + Q+       P   S      N    V   C G  FL  +W  
Sbjct: 71   NH---VVLGDAAAGASNQQL------WPFLSSSKRSIENNLAAV---CDG--FLIVSW-- 114

Query: 852  KNMSGVINPVTRKAAFLSHHFK---VEGDICGAFFHPTEREFRVLWVS--SWITLNEKIF 688
            +N   + NPVTRK A L        +   + G + H    E+RVLWVS   +  ++    
Sbjct: 115  ENKFYICNPVTRKHALLPQPQAGQYIRNIVVGFYRHHPTGEYRVLWVSGPDYSFISNLYV 174

Query: 687  VVFELLRPRSKS----HPQLCWKGLSLLKYRPVINEPPVNLHERLHWMCWKL--CTGYSI 526
            V     RP+  S      +  W  L      P  N   V+    LHW  +     TG  +
Sbjct: 175  VTVGSDRPQCISVRLPAEEKLWNKL------PSSNSSAVHHRGSLHWHPYGTNDITG-DV 227

Query: 525  QSIMVFDVVKEEFTLMPSISNVQPSIDKLMHILDLDGYLSLW----KLTDVLNIWTKEDY 358
            + I+VFD   E F  M S +       +  ++ D++G L+LW      +  +++W  +DY
Sbjct: 228  RDIVVFDTETESFRRMHSPTQQ----CRYGNLFDMEGTLALWSGLVSKSTSMDVWVMQDY 283

Query: 357  YASCSWTKRYSIEVKLL 307
             A  +W  +Y I+V ++
Sbjct: 284  EAE-TWAFKYRIDVSMV 299


>gb|EEC76822.1| hypothetical protein OsI_14961 [Oryza sativa Indica Group]
          Length = 372

 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 81/315 (25%), Positives = 132/315 (41%), Gaps = 18/315 (5%)
 Frame = -2

Query: 1206 VPEDILIEIFSRMPAECLHQCKQAYEDWNTLCSTSHF---NHNLFLQRASPTIIVHRGSL 1036
            VPE++L EI  R+PA+ + +C+     W  L +++ F   +H  +LQ A P + +H    
Sbjct: 21   VPEELLWEILVRLPAKDVLRCRAVCCSWRRLATSADFLLAHH--WLQPALPLVSLH---- 74

Query: 1035 TGHKLFYVDDDNRGGLKSTQISLGD-RNMPLDHSPSWLPINQFT-----PVKFTCYGLIF 874
                         G +    +   D R  P +  P  L  N ++      +  +C GL+ 
Sbjct: 75   -------------GEVSDASVESFDLRRTPAERRPV-LAFNDYSHRKNFTIHASCDGLLL 120

Query: 873  LEAAWPHKNMSGVINPVTRKAAFLSHHFKVEGDICGAFF-HPTEREFRVLWVSSWITLNE 697
            L  A  H +   + NP TR+ A +     + G I  A + H    E+RVL+   W     
Sbjct: 121  LSLANHHFH---ICNPATRQCALVP---GLTGAIVAALYPHRPSGEYRVLF---WKPRCI 171

Query: 696  KIFVVFELLRPRSKSHPQLCWKGLSLLKYRPVINEPPVNLHERLHWMCWKLCTGYSIQSI 517
             + V  E ++P       +  +G+      P    PPV LH  LH     +  G    S 
Sbjct: 172  GMPVASESMKP-------VLTRGIF-----PANRHPPVMLHGCLH-----IGPGCIRPSG 214

Query: 516  MVFDVVKEEFT-LMPSISNVQPSIDKLMHILDLDGYLSLWKLTD-------VLNIWTKED 361
            ++FD V E F  LMPS     P+     ++ D+DG L +    D       +  +W  +D
Sbjct: 215  VIFDPVAESFVRLMPS-----PTASSGANLHDMDGTLGISSTFDDRSGTVRIAKLWELQD 269

Query: 360  YYASCSWTKRYSIEV 316
            Y     W+ +Y I++
Sbjct: 270  YEMGI-WSLKYQIKL 283


>ref|XP_003605042.1| F-box/kelch-repeat protein [Medicago truncatula]
            gi|355506097|gb|AES87239.1| F-box/kelch-repeat protein
            [Medicago truncatula]
          Length = 357

 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 77/356 (21%), Positives = 146/356 (41%), Gaps = 15/356 (4%)
 Frame = -2

Query: 1233 MSCKPFSEPVPEDILIEIFSRMPAECLHQCKQAYEDWNTLCSTSHFNHNLF-LQRASPTI 1057
            M  K  S  +P D++I I  R+P + L + K   + W +L S  HF  + F    A+ T 
Sbjct: 1    MEKKKTSVHLPHDLIILILLRLPVKYLIRFKCVCKSWFSLISEPHFAKSQFQFTTATHTR 60

Query: 1056 IVHRGSLTGHKLFYVDDDNRGGLKSTQISLGDRNMPLDHSPSWLPINQFT-PVKFTCYGL 880
             +   S   H++  +D D           L D ++P  +    LP + F   +  +C G 
Sbjct: 61   RIIGLSSLSHEIRSIDVD---------AWLND-DLPSANLNFLLPKSYFPFEIIGSCGGF 110

Query: 879  IFLEAAWPHKNMSGVINPVTRKAAFLSHHFKVEGDICGAFFHPTEREFRVLWVSSWITLN 700
            +FL   +P   +        ++    S       D    F +   R+  VL V S ++ +
Sbjct: 111  LFL-YRFPDIYLWNPSTGFKKQIPVSSFDSNKPHDNLYGFGYDQSRDDYVLVVFSHVSSH 169

Query: 699  EKIFVVFELLRPRSKSHPQLCWKGL--SLLKYRPVINEPPVNLHERLHWMCWKLCTGYSI 526
             ++F           S P   WK +  +   Y    +      +E +HW+ W      ++
Sbjct: 170  LEVF-----------SFPDNTWKEIEGTNFAYADPSHRKGFLFNEAIHWLAWS--CDLNL 216

Query: 525  QSIMVFDVVKEEFTLMPSISNVQP-SIDKLMHILDLDGYLSLWKLT---DVLNIWTKEDY 358
              I+VFD++K +   +P  ++    ++D    +      LS+W LT   + + IW  ++Y
Sbjct: 217  DVIIVFDLIKRKLIEIPLQNDFGGLTLDADSGLWVFGETLSIWILTSDGERIEIWVLKEY 276

Query: 357  YASCSWTKRYSIEVKLLHKKINIDEV-------SVVGFQNGALVIHWIGKGILVYH 211
                SW K   + V  +   +N+  +        ++   +G++++ +  KG L+ H
Sbjct: 277  KVHSSWNKTLVLSVDFIPDNLNVSPMYSTKNGEIIIVTTDGSILVKYNSKGQLLEH 332


>gb|EEC84673.1| hypothetical protein OsI_31582 [Oryza sativa Indica Group]
          Length = 459

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 78/311 (25%), Positives = 142/311 (45%), Gaps = 14/311 (4%)
 Frame = -2

Query: 1206 VPEDILIEIFSRMPAECLHQCKQAYEDWNTLCSTSHF-NHNLFLQRASPTIIVHRGSLTG 1030
            +P+D++  I S +P++ L + K   + W+ + S+  F + +L   + +P+I++  G+   
Sbjct: 95   IPDDVMFNILSWLPSKSLIRFKSVCKAWHAMISSPCFTDAHLECSKRNPSILMVPGAYEK 154

Query: 1029 HKLFYVDDDNRGGLKSTQISLGDRNMPLDHSPSW-LPINQFT-PVKFTCYGLIFLEAAWP 856
             +    D +N   +       G + M L H  ++ L I  +T PV   C GL+ +    P
Sbjct: 155  QE----DGENIAFMMVLYKYHGGKTMELVHMQNFPLGIGVWTRPVH--CNGLLLI----P 204

Query: 855  HKNMSGVI-NPVTRKAAFLSHHFKVEGDIC-----GAFFHPTEREFRVLWVS-SWITLNE 697
              N+  +I NP TR+  FL    KV G+IC     G  F P   +++V   S    +  +
Sbjct: 205  TMNLEMMICNPSTRQIVFLP---KVSGNICTGTRAGFGFDPHSNKYKVARSSYQRDSETQ 261

Query: 696  KIFVVFELLRPRSKSHPQLCWKGLSLLKYRPVINEPPVNLHERLHW-MCWKLCTGYSIQS 520
            ++   FE+L   + +     W+      Y P+    PV++   ++W +C  LC      +
Sbjct: 262  ELVCKFEVLTLGTNA-----WRQTEDPPY-PIDALTPVHVKGAIYWIVCSSLCPD-PPNA 314

Query: 519  IMVFDVVKEEFTLMPSISNVQPSIDKLMHILDLDGYL---SLWKLTDVLNIWTKEDYYAS 349
             + F +  E+F+L P      PS  K +   +++G L     +  T  L IW       +
Sbjct: 315  FLRFCLTDEKFSLFP----CPPSNVKSVRFTEVEGELCCACFFSETLALEIWNCSG-GQN 369

Query: 348  CSWTKRYSIEV 316
              WT+RY I++
Sbjct: 370  LEWTRRYVIQI 380


>ref|NP_001063316.2| Os09g0448100 [Oryza sativa Japonica Group]
            gi|255678938|dbj|BAF25230.2| Os09g0448100, partial [Oryza
            sativa Japonica Group]
          Length = 432

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 78/313 (24%), Positives = 143/313 (45%), Gaps = 16/313 (5%)
 Frame = -2

Query: 1206 VPEDILIEIFSRMPAECLHQCKQAYEDWNTLCSTSHF-NHNLFLQRASPTIIVHRGSLTG 1030
            +P+D++  I S +P++ L + K   + W+ + S+  F + +L   + +P+I++  G+   
Sbjct: 68   IPDDVMFNILSWLPSKSLIRFKSVCKAWHAMISSPCFTDAHLECSKRNPSILMVPGAYEK 127

Query: 1029 HKLFYVDDDNRGGLKSTQISLGDRNMPLDHSPSW-LPINQFT-PVKFTCYGLIFLEAAWP 856
             +    D +N   +       G + M L H  ++ L I  +T PV   C GL+ +    P
Sbjct: 128  QE----DGENIAFMMVLYKYHGGKTMELVHMQNFPLGIGVWTRPVH--CNGLLLI----P 177

Query: 855  HKNMSGVI-NPVTRKAAFLSHHFKVEGDIC-----GAFFHPTEREFRVLWVSSWI---TL 703
              N+  +I NP TR+  FL    KV G+IC     G  F P   +++V    S+    + 
Sbjct: 178  TMNLEMMICNPSTRQIVFLP---KVSGNICTGTRAGFGFDPHSNKYKV--ARSFYQRDSE 232

Query: 702  NEKIFVVFELLRPRSKSHPQLCWKGLSLLKYRPVINEPPVNLHERLHW-MCWKLCTGYSI 526
             +++   FE+L   + +     W+      Y P+    PV++   ++W +C  LC     
Sbjct: 233  TQELVCKFEVLTLGTNA-----WRQTEDPPY-PIDALTPVHVKGAIYWIVCSSLCPD-PP 285

Query: 525  QSIMVFDVVKEEFTLMPSISNVQPSIDKLMHILDLDGYL---SLWKLTDVLNIWTKEDYY 355
             + + F +  E+F+L P      PS  K +   +++G L     +  T  L IW      
Sbjct: 286  NAFLRFCLTDEKFSLFP----CPPSNVKSVRFTEVEGELCCACFFSETLALEIWNCSG-G 340

Query: 354  ASCSWTKRYSIEV 316
             +  WT+RY I++
Sbjct: 341  QNLEWTRRYVIQI 353


Top