BLASTX nr result
ID: Cnidium21_contig00007386
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00007386
(1995 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284134.1| PREDICTED: ruBisCO large subunit-binding pro... 987 0.0
ref|XP_002285746.1| PREDICTED: ruBisCO large subunit-binding pro... 957 0.0
ref|XP_002523404.1| rubisco subunit binding-protein beta subunit... 952 0.0
ref|XP_002303983.1| predicted protein [Populus trichocarpa] gi|2... 947 0.0
ref|XP_004144069.1| PREDICTED: ruBisCO large subunit-binding pro... 946 0.0
>ref|XP_002284134.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
chloroplastic [Vitis vinifera]
gi|297743227|emb|CBI36094.3| unnamed protein product
[Vitis vinifera]
Length = 609
Score = 987 bits (2552), Expect = 0.0
Identities = 517/562 (91%), Positives = 539/562 (95%)
Frame = -3
Query: 1702 KRNVVLHKKCSLKVRAMAKELHFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESK 1523
K+++VL K+CS KVRAMAKEL+FNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESK
Sbjct: 48 KQSMVLQKRCSPKVRAMAKELYFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESK 107
Query: 1522 YGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAASKTNDMAGDGTTTSVVLAQGLINEG 1343
YGSPKIVNDGVTVA+EVELEDPVENIGA+LVRQAASKTND+AGDGTTTSVVLAQGLI EG
Sbjct: 108 YGSPKIVNDGVTVAREVELEDPVENIGARLVRQAASKTNDLAGDGTTTSVVLAQGLITEG 167
Query: 1342 VKVVAAGANPIQITRGIEKTIKSLVAELKLMSKEVEDSELADVAAVSAGNNPEVGKMIAE 1163
VKVVAAGANP+QITRGIE T K+LVAELKLMSKEVEDSELADVAAVSAGNN EVG MIAE
Sbjct: 168 VKVVAAGANPVQITRGIENTTKALVAELKLMSKEVEDSELADVAAVSAGNNYEVGYMIAE 227
Query: 1162 AMSKVGRKGVVTLEEGKSAENSLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVD 983
AM +VGRKGVVTLEEGKSAEN+LYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVD
Sbjct: 228 AMGQVGRKGVVTLEEGKSAENNLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVD 287
Query: 982 KKITNARDLINVLEEAIKGGYPILIIAEDIEQEALATLVVNRLRGALKIAALKAPGFGER 803
KKITNARDLINVLE+AIKGGYPILIIAEDIEQEALATLVVN+LRGALKIAALKAPGFGER
Sbjct: 288 KKITNARDLINVLEDAIKGGYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGER 347
Query: 802 KSQYLDDIAILTGGTVIREEVGLSLDTANKEVLGHAAKVVLTKDTTTIVGDGSTQESVNR 623
KSQYLDDIAILTGGTVIREEVGLSLD A KEVLGHAAKVVLTKDTTTIVGDGSTQE+VN+
Sbjct: 348 KSQYLDDIAILTGGTVIREEVGLSLDKAEKEVLGHAAKVVLTKDTTTIVGDGSTQEAVNK 407
Query: 622 RVAQIRNLAEAAEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATK 443
RVAQIRNL EAA+QDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATK
Sbjct: 408 RVAQIRNLVEAADQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATK 467
Query: 442 AAXXXXXXXXXGCTLLRLAAKVDAIKDTLDNDEQKVGADIVKRALRYPMKLIAKNAGVNG 263
AA GCTLLRLAAKVDAIKDTLD+DEQKVGADIVKRAL YPMKLIAKNAGVNG
Sbjct: 468 AAVEEGIVVGGGCTLLRLAAKVDAIKDTLDSDEQKVGADIVKRALSYPMKLIAKNAGVNG 527
Query: 262 SVVIEKVLTNDDQKYGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVARTFLTSDAVV 83
SVVIEKVL++D+ KYGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVARTFLTSDAVV
Sbjct: 528 SVVIEKVLSSDNPKYGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVARTFLTSDAVV 587
Query: 82 VDIKEPENVPAGNPMDNSGYGY 17
VDIKEPE +PAGNPMDNSGYGY
Sbjct: 588 VDIKEPEPIPAGNPMDNSGYGY 609
>ref|XP_002285746.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
chloroplastic [Vitis vinifera]
gi|297746501|emb|CBI16557.3| unnamed protein product
[Vitis vinifera]
Length = 608
Score = 957 bits (2474), Expect = 0.0
Identities = 501/562 (89%), Positives = 532/562 (94%)
Frame = -3
Query: 1702 KRNVVLHKKCSLKVRAMAKELHFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESK 1523
++NVVL + S ++ AMAK+L+FNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESK
Sbjct: 47 RQNVVLRRTRSPRINAMAKDLYFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESK 106
Query: 1522 YGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAASKTNDMAGDGTTTSVVLAQGLINEG 1343
YGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAA+KTND+AGDGTTTSVVLAQGLI EG
Sbjct: 107 YGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEG 166
Query: 1342 VKVVAAGANPIQITRGIEKTIKSLVAELKLMSKEVEDSELADVAAVSAGNNPEVGKMIAE 1163
VKVVAAGANP+ ITRGIEKT KSLVAELKL+SKEVEDSELADVAAVSAGNN EVG MIAE
Sbjct: 167 VKVVAAGANPVLITRGIEKTTKSLVAELKLISKEVEDSELADVAAVSAGNNHEVGNMIAE 226
Query: 1162 AMSKVGRKGVVTLEEGKSAENSLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVD 983
AMSKVGRKGVVTLEEGKSAEN LYVVEGMQFDRGYISPYFVTDSEKMAVE+ENCKLLLVD
Sbjct: 227 AMSKVGRKGVVTLEEGKSAENHLYVVEGMQFDRGYISPYFVTDSEKMAVEFENCKLLLVD 286
Query: 982 KKITNARDLINVLEEAIKGGYPILIIAEDIEQEALATLVVNRLRGALKIAALKAPGFGER 803
KKITNARDLINVLE+AI+GGYPILIIAEDIEQEALATLVVN+LRG+LKIAALKAPGFGER
Sbjct: 287 KKITNARDLINVLEDAIRGGYPILIIAEDIEQEALATLVVNKLRGSLKIAALKAPGFGER 346
Query: 802 KSQYLDDIAILTGGTVIREEVGLSLDTANKEVLGHAAKVVLTKDTTTIVGDGSTQESVNR 623
KSQYLDDIAILTGGTVIR+EVGL+LD A KEVLGHAAKVVLTKDTTTIVGDGSTQE+VN+
Sbjct: 347 KSQYLDDIAILTGGTVIRDEVGLTLDKAEKEVLGHAAKVVLTKDTTTIVGDGSTQEAVNK 406
Query: 622 RVAQIRNLAEAAEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATK 443
RVAQIRNL EAAEQ+YEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATK
Sbjct: 407 RVAQIRNLIEAAEQEYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATK 466
Query: 442 AAXXXXXXXXXGCTLLRLAAKVDAIKDTLDNDEQKVGADIVKRALRYPMKLIAKNAGVNG 263
AA GCTLLRLA+KVDAIKDTLDNDE+KVGADIVKRAL YP+KLIAKNAGVNG
Sbjct: 467 AAVEEGIVVGGGCTLLRLASKVDAIKDTLDNDEEKVGADIVKRALSYPLKLIAKNAGVNG 526
Query: 262 SVVIEKVLTNDDQKYGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVARTFLTSDAVV 83
SVV EKVL++D+ KYG+NAATGKYEDLMAAGIIDPTKVVRCCLEHA+SVA+TFL SD VV
Sbjct: 527 SVVSEKVLSSDNPKYGFNAATGKYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVV 586
Query: 82 VDIKEPENVPAGNPMDNSGYGY 17
V+IKEPE V AGNPMDNSGYGY
Sbjct: 587 VEIKEPEPVVAGNPMDNSGYGY 608
>ref|XP_002523404.1| rubisco subunit binding-protein beta subunit, rubb, putative [Ricinus
communis] gi|223537354|gb|EEF38983.1| rubisco subunit
binding-protein beta subunit, rubb, putative [Ricinus
communis]
Length = 605
Score = 952 bits (2462), Expect = 0.0
Identities = 496/562 (88%), Positives = 529/562 (94%)
Frame = -3
Query: 1702 KRNVVLHKKCSLKVRAMAKELHFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESK 1523
++NVVL + S K+ AMAK+LHFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESK
Sbjct: 44 RQNVVLRRSRSPKICAMAKDLHFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESK 103
Query: 1522 YGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAASKTNDMAGDGTTTSVVLAQGLINEG 1343
YGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAA+KTND+AGDGTTTSVVLAQGLI EG
Sbjct: 104 YGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEG 163
Query: 1342 VKVVAAGANPIQITRGIEKTIKSLVAELKLMSKEVEDSELADVAAVSAGNNPEVGKMIAE 1163
VKVVAAGANP+ ITRGIEKT K+LV ELK MSKEVEDSELADVAAVSAGNN EVG MIAE
Sbjct: 164 VKVVAAGANPVLITRGIEKTSKALVTELKSMSKEVEDSELADVAAVSAGNNYEVGNMIAE 223
Query: 1162 AMSKVGRKGVVTLEEGKSAENSLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVD 983
AMS+VGRKGVVTLEEGKSAENSLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVD
Sbjct: 224 AMSRVGRKGVVTLEEGKSAENSLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVD 283
Query: 982 KKITNARDLINVLEEAIKGGYPILIIAEDIEQEALATLVVNRLRGALKIAALKAPGFGER 803
KKITNARDLIN+LE+AI+GGYPIL+IAEDIEQEALATLVVN+LRGALKIAALKAPGFGER
Sbjct: 284 KKITNARDLINILEDAIRGGYPILVIAEDIEQEALATLVVNKLRGALKIAALKAPGFGER 343
Query: 802 KSQYLDDIAILTGGTVIREEVGLSLDTANKEVLGHAAKVVLTKDTTTIVGDGSTQESVNR 623
KSQYLDDIAILTGGTV+REEVGLSLD KE+LG+A+KVVLTKDTTTIVGDGSTQE+V +
Sbjct: 344 KSQYLDDIAILTGGTVVREEVGLSLDKVGKEILGNASKVVLTKDTTTIVGDGSTQEAVTK 403
Query: 622 RVAQIRNLAEAAEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATK 443
RVAQIRNL EAAEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATK
Sbjct: 404 RVAQIRNLIEAAEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATK 463
Query: 442 AAXXXXXXXXXGCTLLRLAAKVDAIKDTLDNDEQKVGADIVKRALRYPMKLIAKNAGVNG 263
AA GCTLLRLA+KVDAIKD+LDNDE+KVGADIVKRAL YP+KLIAKNAGVNG
Sbjct: 464 AAVEEGIVVGGGCTLLRLASKVDAIKDSLDNDEEKVGADIVKRALSYPLKLIAKNAGVNG 523
Query: 262 SVVIEKVLTNDDQKYGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVARTFLTSDAVV 83
SVV EKVL++D+ ++GYNAATG YEDLMAAGIIDPTKVVRCCLEHA+SVA+TFL SD VV
Sbjct: 524 SVVSEKVLSSDNPRFGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVV 583
Query: 82 VDIKEPENVPAGNPMDNSGYGY 17
V+IKEPE VPAGNPMDNSGYGY
Sbjct: 584 VEIKEPEAVPAGNPMDNSGYGY 605
>ref|XP_002303983.1| predicted protein [Populus trichocarpa] gi|222841415|gb|EEE78962.1|
predicted protein [Populus trichocarpa]
Length = 607
Score = 947 bits (2447), Expect = 0.0
Identities = 495/561 (88%), Positives = 528/561 (94%)
Frame = -3
Query: 1699 RNVVLHKKCSLKVRAMAKELHFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKY 1520
+NVVL + LKV A AKELHFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKY
Sbjct: 48 QNVVLPRSRPLKVNA-AKELHFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKY 106
Query: 1519 GSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAASKTNDMAGDGTTTSVVLAQGLINEGV 1340
GSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAA+KTND+AGDGTTTSVVLAQGLI EGV
Sbjct: 107 GSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGV 166
Query: 1339 KVVAAGANPIQITRGIEKTIKSLVAELKLMSKEVEDSELADVAAVSAGNNPEVGKMIAEA 1160
KVVAAGANP+ ITRGIEKT ++LV ELKLMSKEVEDSELADVAAVSAGNN EVG MIAEA
Sbjct: 167 KVVAAGANPVLITRGIEKTTRALVNELKLMSKEVEDSELADVAAVSAGNNYEVGNMIAEA 226
Query: 1159 MSKVGRKGVVTLEEGKSAENSLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDK 980
MSKVGRKGVVTLEEGKSA+NSLYVVEGMQFDRGYISPYFVTDSEKM+VEYENCKLLLVDK
Sbjct: 227 MSKVGRKGVVTLEEGKSADNSLYVVEGMQFDRGYISPYFVTDSEKMSVEYENCKLLLVDK 286
Query: 979 KITNARDLINVLEEAIKGGYPILIIAEDIEQEALATLVVNRLRGALKIAALKAPGFGERK 800
KITNARDLI++LE+AI+ GYP+LIIAEDIEQEALATLVVN+LRGALKIAALKAPGFGERK
Sbjct: 287 KITNARDLISILEDAIRAGYPVLIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERK 346
Query: 799 SQYLDDIAILTGGTVIREEVGLSLDTANKEVLGHAAKVVLTKDTTTIVGDGSTQESVNRR 620
SQYLDDIAILTGGTV+REEVGL+LD KEVLGHA+KVVLTKDTTTIVGDGSTQE+VN+R
Sbjct: 347 SQYLDDIAILTGGTVVREEVGLALDKVGKEVLGHASKVVLTKDTTTIVGDGSTQEAVNKR 406
Query: 619 VAQIRNLAEAAEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKA 440
VAQIRNL EAAEQDYE+EKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKA
Sbjct: 407 VAQIRNLIEAAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKA 466
Query: 439 AXXXXXXXXXGCTLLRLAAKVDAIKDTLDNDEQKVGADIVKRALRYPMKLIAKNAGVNGS 260
A GCTLLRLA+KVDAIKD+L+NDE+KVGADIVKRAL YP+KLIAKNAGVNGS
Sbjct: 467 AVEEGIVVGGGCTLLRLASKVDAIKDSLENDEEKVGADIVKRALSYPLKLIAKNAGVNGS 526
Query: 259 VVIEKVLTNDDQKYGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVARTFLTSDAVVV 80
VV EKVL+ D+ K+GYNAATG YEDLMAAGIIDPTKVVRCCLEHA+SVA+TFL SD VVV
Sbjct: 527 VVSEKVLSTDNPKFGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVV 586
Query: 79 DIKEPENVPAGNPMDNSGYGY 17
+IKEPE+VPAGNPMDNSGYGY
Sbjct: 587 EIKEPESVPAGNPMDNSGYGY 607
>ref|XP_004144069.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
chloroplastic-like [Cucumis sativus]
Length = 608
Score = 946 bits (2445), Expect = 0.0
Identities = 495/592 (83%), Positives = 537/592 (90%)
Frame = -3
Query: 1792 PCTRMMDTKNXXXXXXXXXXXXXXXXSLQMKRNVVLHKKCSLKVRAMAKELHFNKDGSAI 1613
P +R+MD K +L +++VVL + S K+ AMAKELHFN+DGSAI
Sbjct: 17 PGSRVMDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKISAMAKELHFNQDGSAI 76
Query: 1612 KKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKL 1433
KKLQ GVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKL
Sbjct: 77 KKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKL 136
Query: 1432 VRQAASKTNDMAGDGTTTSVVLAQGLINEGVKVVAAGANPIQITRGIEKTIKSLVAELKL 1253
VRQAA+KTND+AGDGTTTSVVLAQGLI EGVKVVAAGANP+ ITRGIEKT K+LV+ELK
Sbjct: 137 VRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTAKALVSELKK 196
Query: 1252 MSKEVEDSELADVAAVSAGNNPEVGKMIAEAMSKVGRKGVVTLEEGKSAENSLYVVEGMQ 1073
MSKEVEDSELADVAAVSAGNN EVG MIAEAMSKVGRKGVVTLEEG+SA+N LYVVEGMQ
Sbjct: 197 MSKEVEDSELADVAAVSAGNNHEVGNMIAEAMSKVGRKGVVTLEEGRSADNFLYVVEGMQ 256
Query: 1072 FDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEEAIKGGYPILIIAEDI 893
FDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLIN+LE+AI+GGYP++I+AEDI
Sbjct: 257 FDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINILEDAIRGGYPVVIMAEDI 316
Query: 892 EQEALATLVVNRLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIREEVGLSLDTANK 713
EQEALATLVVN+LRG+LKIAALKAPGFGERKSQYLDDIAILTGGTVIREEVGLSLD A K
Sbjct: 317 EQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGGTVIREEVGLSLDKAGK 376
Query: 712 EVLGHAAKVVLTKDTTTIVGDGSTQESVNRRVAQIRNLAEAAEQDYEKEKLNERIAKLSG 533
EVLG+A+K+VLTKDTTTIVGDGSTQE+V++RVAQI+NL E AEQDYEKEKLNERIAKLSG
Sbjct: 377 EVLGNASKIVLTKDTTTIVGDGSTQEAVSKRVAQIKNLIEVAEQDYEKEKLNERIAKLSG 436
Query: 532 GVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLAAKVDAIKDTLD 353
GVAVIQVGAQTETELKEKKLRVEDALNATKAA GCTLLRLA+KVDAIK+T +
Sbjct: 437 GVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKETFE 496
Query: 352 NDEQKVGADIVKRALRYPMKLIAKNAGVNGSVVIEKVLTNDDQKYGYNAATGKYEDLMAA 173
NDE+KVGADIVKRAL YP+KLIAKNAGVNGSVV EKVL++D+ +YGYNAATG YEDLMAA
Sbjct: 497 NDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNYRYGYNAATGNYEDLMAA 556
Query: 172 GIIDPTKVVRCCLEHAASVARTFLTSDAVVVDIKEPENVPAGNPMDNSGYGY 17
GIIDPTKVVRCCLEHAASVA+TFL SD VVV+IKEPE VPAGNPMDNSGYGY
Sbjct: 557 GIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPAGNPMDNSGYGY 608