BLASTX nr result

ID: Cnidium21_contig00007383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007383
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36035.3| unnamed protein product [Vitis vinifera]              110   1e-22
ref|XP_002277638.1| PREDICTED: DNA repair protein RadA homolog [...   110   1e-22
emb|CBI36034.3| unnamed protein product [Vitis vinifera]              108   6e-22
dbj|BAB09453.1| DNA repair protein-like [Arabidopsis thaliana]        106   3e-21
ref|XP_002863004.1| hypothetical protein ARALYDRAFT_359214 [Arab...   106   3e-21

>emb|CBI36035.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  110 bits (275), Expect = 1e-22
 Identities = 58/86 (67%), Positives = 63/86 (73%)
 Frame = +2

Query: 2   AICSSFLEFPIPPGVAFIAEIGLGGELRTVQRMEKRVITVAKLGYKMCVVPXXXXXXXXX 181
           AICSSFLEFPIP G+AFI EIGLGGELRTV RMEKRV TVAKLGYK C+VP         
Sbjct: 501 AICSSFLEFPIPNGIAFIGEIGLGGELRTVPRMEKRVNTVAKLGYKKCIVP----KAAEK 556

Query: 182 XXXXXXXMEMEILGCRNLKEVINHVF 259
                  M +EI+GCRN+KEVIN VF
Sbjct: 557 SLPTLEDMNIEIVGCRNMKEVINTVF 582


>ref|XP_002277638.1| PREDICTED: DNA repair protein RadA homolog [Vitis vinifera]
          Length = 624

 Score =  110 bits (275), Expect = 1e-22
 Identities = 58/86 (67%), Positives = 63/86 (73%)
 Frame = +2

Query: 2   AICSSFLEFPIPPGVAFIAEIGLGGELRTVQRMEKRVITVAKLGYKMCVVPXXXXXXXXX 181
           AICSSFLEFPIP G+AFI EIGLGGELRTV RMEKRV TVAKLGYK C+VP         
Sbjct: 542 AICSSFLEFPIPNGIAFIGEIGLGGELRTVPRMEKRVNTVAKLGYKKCIVP----KAAEK 597

Query: 182 XXXXXXXMEMEILGCRNLKEVINHVF 259
                  M +EI+GCRN+KEVIN VF
Sbjct: 598 SLPTLEDMNIEIVGCRNMKEVINTVF 623


>emb|CBI36034.3| unnamed protein product [Vitis vinifera]
          Length = 545

 Score =  108 bits (270), Expect = 6e-22
 Identities = 58/86 (67%), Positives = 63/86 (73%)
 Frame = +2

Query: 2   AICSSFLEFPIPPGVAFIAEIGLGGELRTVQRMEKRVITVAKLGYKMCVVPXXXXXXXXX 181
           AICSSFLEFPIP G+AFI EIGLGGELRTV R+EKRV TVAKLGYK CVVP         
Sbjct: 463 AICSSFLEFPIPNGIAFIGEIGLGGELRTVPRIEKRVNTVAKLGYKKCVVP----KAAEK 518

Query: 182 XXXXXXXMEMEILGCRNLKEVINHVF 259
                  M +EI+GCRNLKEVI+ VF
Sbjct: 519 SLPTLEDMNIEIVGCRNLKEVISSVF 544


>dbj|BAB09453.1| DNA repair protein-like [Arabidopsis thaliana]
          Length = 484

 Score =  106 bits (264), Expect = 3e-21
 Identities = 56/87 (64%), Positives = 63/87 (72%)
 Frame = +2

Query: 2   AICSSFLEFPIPPGVAFIAEIGLGGELRTVQRMEKRVITVAKLGYKMCVVPXXXXXXXXX 181
           AICSSFLEFPIP GVAFI EIGLGGE+RTV RMEKRV TVAKLG+  CVVP         
Sbjct: 401 AICSSFLEFPIPHGVAFIGEIGLGGEVRTVPRMEKRVSTVAKLGFNKCVVP----KSVEE 456

Query: 182 XXXXXXXMEMEILGCRNLKEVINHVFR 262
                   E+EI+GC+NLKE+IN VF+
Sbjct: 457 SLKALSLKEIEIIGCKNLKELINAVFK 483


>ref|XP_002863004.1| hypothetical protein ARALYDRAFT_359214 [Arabidopsis lyrata subsp.
           lyrata] gi|297308800|gb|EFH39263.1| hypothetical protein
           ARALYDRAFT_359214 [Arabidopsis lyrata subsp. lyrata]
          Length = 193

 Score =  106 bits (264), Expect = 3e-21
 Identities = 56/87 (64%), Positives = 63/87 (72%)
 Frame = +2

Query: 2   AICSSFLEFPIPPGVAFIAEIGLGGELRTVQRMEKRVITVAKLGYKMCVVPXXXXXXXXX 181
           AICSSFLEFPIP GVAFI EIGLGGE+RTV RMEKRV T+AKLG+  CVVP         
Sbjct: 110 AICSSFLEFPIPHGVAFIGEIGLGGEVRTVPRMEKRVSTLAKLGFNKCVVP----KSVEE 165

Query: 182 XXXXXXXMEMEILGCRNLKEVINHVFR 262
                   E+EI+GC+NLKE+IN VFR
Sbjct: 166 SLKALNLKEIEIIGCKNLKELINAVFR 192


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