BLASTX nr result

ID: Cnidium21_contig00007337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007337
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEC10963.1| 40S ribosomal protein s17 [Camellia sinensis]           75   4e-12
ref|XP_002871207.1| 40S ribosomal protein S17 [Arabidopsis lyrat...    68   9e-10
gb|AFK42207.1| unknown [Medicago truncatula]                           67   2e-09
ref|XP_003635820.1| 40S ribosomal protein S17 [Medicago truncatu...    67   2e-09
gb|ACJ84115.1| unknown [Medicago truncatula] gi|388503948|gb|AFK...    67   2e-09

>gb|AEC10963.1| 40S ribosomal protein s17 [Camellia sinensis]
          Length = 149

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/40 (90%), Positives = 39/40 (97%)
 Frame = +3

Query: 3   DFVPDESAIRTDRIEVDKETIDLLASLGMSELPGIVLKEE 122
           DFVPDESAI+TD IEVDKETIDLLASLGMSE+PG+VLKEE
Sbjct: 83  DFVPDESAIKTDHIEVDKETIDLLASLGMSEMPGVVLKEE 122


>ref|XP_002871207.1| 40S ribosomal protein S17 [Arabidopsis lyrata subsp. lyrata]
           gi|297317044|gb|EFH47466.1| 40S ribosomal protein S17
           [Arabidopsis lyrata subsp. lyrata]
          Length = 139

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/51 (66%), Positives = 41/51 (80%)
 Frame = +3

Query: 3   DFVPDESAIRTDRIEVDKETIDLLASLGMSELPGIVLKEEQAPVVAMPYAS 155
           DFVPDESAI+TD IEVDKET+++LASLGMSELPG+V  +   P  A P A+
Sbjct: 83  DFVPDESAIKTDHIEVDKETLEMLASLGMSELPGVVKVD---PAAAAPVAA 130


>gb|AFK42207.1| unknown [Medicago truncatula]
          Length = 144

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/49 (65%), Positives = 41/49 (83%)
 Frame = +3

Query: 3   DFVPDESAIRTDRIEVDKETIDLLASLGMSELPGIVLKEEQAPVVAMPY 149
           DFVPD SAIRTD IEVDKET+D+LA+LGMSE+PG+V + +  PV  +P+
Sbjct: 83  DFVPDVSAIRTDHIEVDKETLDMLAALGMSEIPGVV-QVDPVPVQQVPF 130


>ref|XP_003635820.1| 40S ribosomal protein S17 [Medicago truncatula]
           gi|355501755|gb|AES82958.1| 40S ribosomal protein S17
           [Medicago truncatula]
          Length = 291

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/49 (65%), Positives = 41/49 (83%)
 Frame = +3

Query: 3   DFVPDESAIRTDRIEVDKETIDLLASLGMSELPGIVLKEEQAPVVAMPY 149
           DFVPD SAIRTD IEVDKET+D+LA+LGMSE+PG+V + +  PV  +P+
Sbjct: 83  DFVPDVSAIRTDHIEVDKETLDMLAALGMSEIPGVV-QVDPVPVQQIPF 130



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/36 (80%), Positives = 34/36 (94%)
 Frame = +3

Query: 3   DFVPDESAIRTDRIEVDKETIDLLASLGMSELPGIV 110
           DFVPD SAIRTD IEVDKETID+LA+LGMS++PG+V
Sbjct: 248 DFVPDVSAIRTDHIEVDKETIDMLAALGMSKIPGVV 283


>gb|ACJ84115.1| unknown [Medicago truncatula] gi|388503948|gb|AFK40040.1| unknown
           [Medicago truncatula]
          Length = 144

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/49 (65%), Positives = 41/49 (83%)
 Frame = +3

Query: 3   DFVPDESAIRTDRIEVDKETIDLLASLGMSELPGIVLKEEQAPVVAMPY 149
           DFVPD SAIRTD IEVDKET+D+LA+LGMSE+PG+V + +  PV  +P+
Sbjct: 83  DFVPDVSAIRTDHIEVDKETLDMLAALGMSEIPGVV-QVDPVPVQQIPF 130


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