BLASTX nr result

ID: Cnidium21_contig00007304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007304
         (874 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266663.1| PREDICTED: exosome complex component CSL4 [V...   308   1e-81
ref|NP_001242874.1| uncharacterized protein LOC100796154 [Glycin...   301   2e-79
ref|XP_002319669.1| predicted protein [Populus trichocarpa] gi|1...   300   2e-79
ref|XP_002522015.1| conserved hypothetical protein [Ricinus comm...   298   8e-79
gb|ACU17429.1| unknown [Glycine max]                                  295   9e-78

>ref|XP_002266663.1| PREDICTED: exosome complex component CSL4 [Vitis vinifera]
           gi|296085148|emb|CBI28643.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  308 bits (788), Expect = 1e-81
 Identities = 154/192 (80%), Positives = 170/192 (88%)
 Frame = -1

Query: 787 ESSSSLVTPGEILGKAFEVKAGKGAYLSPHNHTVYASLTGLTRFVLPTPDSLDQRPTVQV 608
           E +  LVTPGE+LGK  ++KAG+GAY  P N TVYASLTG    + P+P S DQRPTV+V
Sbjct: 5   EEAEELVTPGEVLGKGSQLKAGRGAYFLPQNGTVYASLTGRRSLIPPSPLSSDQRPTVEV 64

Query: 607 TGHKAHGAVPQPASIVIARVTKVMSRMASADIMCVGPKSVREKFTGIIRQQDVRATEIDK 428
           TGH AHGA+P+P SIVIARVTKVM+RMASADIMCVGPKSVREKFTGIIRQQDVRATEIDK
Sbjct: 65  TGHSAHGAIPEPGSIVIARVTKVMARMASADIMCVGPKSVREKFTGIIRQQDVRATEIDK 124

Query: 427 VEMHSSFRPGDIVKAQVLSLGDARAYHLSTAKNELGVVSAESSSGATMVPISWTEMQCPL 248
           V+MHSSFRPGDIV+A VLSLGDARAY LSTAKNELGVVSAES++GATMVP+SWTEMQCPL
Sbjct: 125 VDMHSSFRPGDIVRALVLSLGDARAYFLSTAKNELGVVSAESAAGATMVPMSWTEMQCPL 184

Query: 247 TGQTEPRKVAKV 212
           TGQ E RKVAKV
Sbjct: 185 TGQIEQRKVAKV 196


>ref|NP_001242874.1| uncharacterized protein LOC100796154 [Glycine max]
           gi|255640712|gb|ACU20640.1| unknown [Glycine max]
          Length = 197

 Score =  301 bits (770), Expect = 2e-79
 Identities = 151/192 (78%), Positives = 166/192 (86%)
 Frame = -1

Query: 790 EESSSSLVTPGEILGKAFEVKAGKGAYLSPHNHTVYASLTGLTRFVLPTPDSLDQRPTVQ 611
           EE  + +VTPGE+LG+  +VKAG+GAY + HN+TVYASLTG    V P PDS D RPTV+
Sbjct: 3   EEKEAVMVTPGEVLGRTSDVKAGRGAYAALHNNTVYASLTGFRHTVPPAPDSSDLRPTVE 62

Query: 610 VTGHKAHGAVPQPASIVIARVTKVMSRMASADIMCVGPKSVREKFTGIIRQQDVRATEID 431
           VTGHKAHG VPQP S+VIARVTKVM+R ASADIMCVGPKSVR KFTGIIRQQDVRATEID
Sbjct: 63  VTGHKAHGPVPQPGSVVIARVTKVMARSASADIMCVGPKSVRGKFTGIIRQQDVRATEID 122

Query: 430 KVEMHSSFRPGDIVKAQVLSLGDARAYHLSTAKNELGVVSAESSSGATMVPISWTEMQCP 251
           KV+MH SF PGDIV+A VLSLGDARAY LSTAKNELGVVSAES +GATMVP+SWTEMQCP
Sbjct: 123 KVDMHLSFHPGDIVRALVLSLGDARAYFLSTAKNELGVVSAESIAGATMVPVSWTEMQCP 182

Query: 250 LTGQTEPRKVAK 215
           LTGQ E RKVAK
Sbjct: 183 LTGQIEQRKVAK 194


>ref|XP_002319669.1| predicted protein [Populus trichocarpa] gi|118483759|gb|ABK93772.1|
           unknown [Populus trichocarpa]
           gi|222858045|gb|EEE95592.1| predicted protein [Populus
           trichocarpa]
          Length = 199

 Score =  300 bits (769), Expect = 2e-79
 Identities = 151/196 (77%), Positives = 172/196 (87%), Gaps = 4/196 (2%)
 Frame = -1

Query: 787 ESSSSLVTPGEILGKAFEVKAGKGAYLSPHNHT----VYASLTGLTRFVLPTPDSLDQRP 620
           +    + TPGE+LGKA E+KAGKGAY+  +  T    V++SLTGL R + P+PDS DQRP
Sbjct: 2   QEEGEMATPGEVLGKATELKAGKGAYIGSYRDTDIQYVFSSLTGLRRTLSPSPDSPDQRP 61

Query: 619 TVQVTGHKAHGAVPQPASIVIARVTKVMSRMASADIMCVGPKSVREKFTGIIRQQDVRAT 440
           TV+VTGHKAHGAVP+P S+VIARVTKVM++ ASADIMCVGPKSV+EKFTGIIRQQDVRAT
Sbjct: 62  TVEVTGHKAHGAVPEPGSVVIARVTKVMAKTASADIMCVGPKSVQEKFTGIIRQQDVRAT 121

Query: 439 EIDKVEMHSSFRPGDIVKAQVLSLGDARAYHLSTAKNELGVVSAESSSGATMVPISWTEM 260
           EIDKV+MH SFRPGDIV+A VLSLGDARAY+LSTAKNELGVVSAES++GATMVPISWTEM
Sbjct: 122 EIDKVDMHLSFRPGDIVRALVLSLGDARAYYLSTAKNELGVVSAESAAGATMVPISWTEM 181

Query: 259 QCPLTGQTEPRKVAKV 212
           QCPLTGQ E RKVAKV
Sbjct: 182 QCPLTGQIEQRKVAKV 197


>ref|XP_002522015.1| conserved hypothetical protein [Ricinus communis]
           gi|223538819|gb|EEF40419.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 593

 Score =  298 bits (764), Expect = 8e-79
 Identities = 151/198 (76%), Positives = 173/198 (87%), Gaps = 4/198 (2%)
 Frame = -1

Query: 793 MEESSSSLVTPGEILGKAFEVKAGKGAYLSPHNHT----VYASLTGLTRFVLPTPDSLDQ 626
           ME     +VTPGE+LGKA E+KAGKGAY++P+ +T    VY+SL+G  R + PTPDS DQ
Sbjct: 394 MEGEKEEMVTPGEVLGKASELKAGKGAYVAPYRNTDIFYVYSSLSGFLRTLAPTPDSPDQ 453

Query: 625 RPTVQVTGHKAHGAVPQPASIVIARVTKVMSRMASADIMCVGPKSVREKFTGIIRQQDVR 446
           RPTV+VTG KA GAVP+  S+VIARVTKVM++MASADIMCVGPKSVREKFTG+IRQQDVR
Sbjct: 454 RPTVEVTGLKARGAVPEAGSVVIARVTKVMAKMASADIMCVGPKSVREKFTGLIRQQDVR 513

Query: 445 ATEIDKVEMHSSFRPGDIVKAQVLSLGDARAYHLSTAKNELGVVSAESSSGATMVPISWT 266
           ATEIDKV+MH SFRPGDIV+A VLSLGDARAY+LSTAKNELGVVSAES++G TMVPISWT
Sbjct: 514 ATEIDKVDMHLSFRPGDIVRAVVLSLGDARAYYLSTAKNELGVVSAESTAGGTMVPISWT 573

Query: 265 EMQCPLTGQTEPRKVAKV 212
           EMQCPLTGQ E RKVAK+
Sbjct: 574 EMQCPLTGQIEQRKVAKL 591


>gb|ACU17429.1| unknown [Glycine max]
          Length = 189

 Score =  295 bits (755), Expect = 9e-78
 Identities = 147/186 (79%), Positives = 162/186 (87%)
 Frame = -1

Query: 790 EESSSSLVTPGEILGKAFEVKAGKGAYLSPHNHTVYASLTGLTRFVLPTPDSLDQRPTVQ 611
           EE  + +VTPGE+LG+  +VKAG+GAY + HN+TVYASLTG    V P PDS D RPTV+
Sbjct: 3   EEKEAVMVTPGEVLGRTSDVKAGRGAYAALHNNTVYASLTGFRHTVPPAPDSSDLRPTVE 62

Query: 610 VTGHKAHGAVPQPASIVIARVTKVMSRMASADIMCVGPKSVREKFTGIIRQQDVRATEID 431
           VTGHKAHG VPQP S+VIARVTKVM+R ASADIMCVGPKSVREKFTGIIRQQDVRATEID
Sbjct: 63  VTGHKAHGPVPQPGSVVIARVTKVMARSASADIMCVGPKSVREKFTGIIRQQDVRATEID 122

Query: 430 KVEMHSSFRPGDIVKAQVLSLGDARAYHLSTAKNELGVVSAESSSGATMVPISWTEMQCP 251
           KV+MH SF PGDIV+A VLSLGDARAY LSTAKNELGVVSAES +GATMVP+SWTEMQCP
Sbjct: 123 KVDMHLSFHPGDIVRALVLSLGDARAYFLSTAKNELGVVSAESIAGATMVPVSWTEMQCP 182

Query: 250 LTGQTE 233
           LTGQ E
Sbjct: 183 LTGQIE 188


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