BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007261
         (2022 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29964.3| unnamed protein product [Vitis vinifera]              811   0.0  
ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-lik...   807   0.0  
ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-lik...   771   0.0  
ref|XP_002882757.1| predicted protein [Arabidopsis lyrata subsp....   724   0.0  
ref|NP_187802.2| Cleavage and polyadenylation specificity factor...   721   0.0  

>emb|CBI29964.3| unnamed protein product [Vitis vinifera]
          Length = 1363

 Score =  811 bits (2094), Expect = 0.0
 Identities = 409/536 (76%), Positives = 465/536 (86%), Gaps = 4/536 (0%)
 Frame = -1

Query: 2022 SDRPWLLQTARHSLMYTSISFQPSTHATPVCSAECPNGVLFVAENSLHLVEMVQSKRLNV 1843
            SDRPWLLQ+ARHSL YTSISFQPSTH TPVCS ECP G+LFVAENSLHLVEMV SKRLNV
Sbjct: 829  SDRPWLLQSARHSLSYTSISFQPSTHVTPVCSMECPMGILFVAENSLHLVEMVHSKRLNV 888

Query: 1842 QKFPLGGTPRKVLYHNESRLLLVMRNDLSNDSYSSDICYVDPLSGSILSSFKLDPGETGK 1663
            QKF LGGTPRKVLYH+ESRLLLVMR +LS D+YSSDIC VDPLSGS+LSSFKL+ GETGK
Sbjct: 889  QKFYLGGTPRKVLYHSESRLLLVMRTELSQDTYSSDICCVDPLSGSVLSSFKLELGETGK 948

Query: 1662 CMELVKVGHEHVLVIGTSLSAGPSIMPSGEAESSSQGRLIVLSLEHRQNSDSGSMTHGSK 1483
             MELV+V +E VLVIGTSLS+GP++MPSGEAES+ +GRLIVL LEH QNSDSGSMT  SK
Sbjct: 949  SMELVRVVNEQVLVIGTSLSSGPAMMPSGEAEST-KGRLIVLCLEHMQNSDSGSMTFCSK 1007

Query: 1482 ASSSSQRTSPFRDVTGYAAEQLSSSSMCSSPDENNFDGIKLEETEAWSMKLCYSTKLSGM 1303
            A SSSQRTSPFR++ GYAAEQLS SS+CSSPD+ + DG++LEE+EAW ++L Y+    GM
Sbjct: 1008 AGSSSQRTSPFREIVGYAAEQLSGSSLCSSPDDTSCDGVRLEESEAWQLRLAYTATWPGM 1067

Query: 1302 VLAVCPYLDRFFLASAGCVFYVCGFPNDNYQRVRRLAVARTRFMIRTLTAHFTRIAVGDC 1123
            VLA+CPYLDR+FLASAG  FYVCGFPNDN QRVRR AV RTRFMI +LTAHFTRIAVGDC
Sbjct: 1068 VLAICPYLDRYFLASAGNSFYVCGFPNDNPQRVRRFAVGRTRFMIMSLTAHFTRIAVGDC 1127

Query: 1122 RDGILFFSYHEDARKLEQLYCDPVQRLVADCMLMDADTAVVSDRKGSVAILSRPSHLEDN 943
            RDG++F+SYHED+RKLEQLYCDP QRLVADC+LMD DTAVVSDRKGS+A+LS  +HLEDN
Sbjct: 1128 RDGVVFYSYHEDSRKLEQLYCDPEQRLVADCILMDVDTAVVSDRKGSIAVLSCSNHLEDN 1187

Query: 942  ASPESNLALNCSYYMGEIAMSIRKGSLLYKLPGDDAFRGCDVANTVFNLSCNSILVSTLL 763
            ASPE NL LNCSYYMGEIAMSI+KGS  YKLP DD  +GCD +NT+ + S NSI+  TLL
Sbjct: 1188 ASPECNLTLNCSYYMGEIAMSIKKGSFSYKLPADDVLKGCDGSNTIIDFSENSIMAGTLL 1247

Query: 762  GSIISFVPLSREEYEILEAVQTRLVVHPLTAPILGNDHNEFRSRESA---ATVPRILDGD 592
            GSII  +P+SREE+E+LEAVQ RL VH LTAPILGNDHNEFRSRE++   A V +ILDGD
Sbjct: 1248 GSIIMLIPISREEHELLEAVQARLAVHQLTAPILGNDHNEFRSRENSVRKAGVSKILDGD 1307

Query: 591  MLAQFLELTSMQQEAVLSLPLGSPKTVMLSLKSS-PPPITANQVVRILERVHYALN 427
            MLAQFLELTSMQQEAVL+LPLGS +TV  S K +   PI+ N+VV++LERVHYALN
Sbjct: 1308 MLAQFLELTSMQQEAVLALPLGSLETVTSSSKQTLLSPISVNRVVQLLERVHYALN 1363


>ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-like [Vitis vinifera]
          Length = 1387

 Score =  807 bits (2084), Expect = 0.0
 Identities = 409/546 (74%), Positives = 465/546 (85%), Gaps = 14/546 (2%)
 Frame = -1

Query: 2022 SDRPWLLQTARHSLMYTSISFQPSTHATPVCSAECPNGVLFVAENSLHLVEMVQSKRLNV 1843
            SDRPWLLQ+ARHSL YTSISFQPSTH TPVCS ECP G+LFVAENSLHLVEMV SKRLNV
Sbjct: 843  SDRPWLLQSARHSLSYTSISFQPSTHVTPVCSMECPMGILFVAENSLHLVEMVHSKRLNV 902

Query: 1842 QKFPLGGTPRKVLYHNESRLLLVMRNDLSNDSYSSDICYVDPLSGSILSSFKLDPGETGK 1663
            QKF LGGTPRKVLYH+ESRLLLVMR +LS D+YSSDIC VDPLSGS+LSSFKL+ GETGK
Sbjct: 903  QKFYLGGTPRKVLYHSESRLLLVMRTELSQDTYSSDICCVDPLSGSVLSSFKLELGETGK 962

Query: 1662 CMELVKVGHEHVLVIGTSLSAGPSIMPSGEAESSSQGRLIVLSLEHRQNSDSGSMTHGSK 1483
             MELV+V +E VLVIGTSLS+GP++MPSGEAES+ +GRLIVL LEH QNSDSGSMT  SK
Sbjct: 963  SMELVRVVNEQVLVIGTSLSSGPAMMPSGEAEST-KGRLIVLCLEHMQNSDSGSMTFCSK 1021

Query: 1482 ASSSSQRTSPFRDVTGYAAEQLSSSSMCSSPDENNFDGIKLEETEAWSMKLCYSTKLSGM 1303
            A SSSQRTSPFR++ GYAAEQLS SS+CSSPD+ + DG++LEE+EAW ++L Y+    GM
Sbjct: 1022 AGSSSQRTSPFREIVGYAAEQLSGSSLCSSPDDTSCDGVRLEESEAWQLRLAYTATWPGM 1081

Query: 1302 VLAVCPYLDRFFLASAGCVFYVCGFPNDNYQRVRRLAVARTRFMIRTLTAHFTRIAVGDC 1123
            VLA+CPYLDR+FLASAG  FYVCGFPNDN QRVRR AV RTRFMI +LTAHFTRIAVGDC
Sbjct: 1082 VLAICPYLDRYFLASAGNSFYVCGFPNDNPQRVRRFAVGRTRFMIMSLTAHFTRIAVGDC 1141

Query: 1122 RDGILFFSYHEDARKLEQLYCDPVQRLVADCMLMDADTAVVSDRKGSVAILSRPSHLE-- 949
            RDG++F+SYHED+RKLEQLYCDP QRLVADC+LMD DTAVVSDRKGS+A+LS  +HLE  
Sbjct: 1142 RDGVVFYSYHEDSRKLEQLYCDPEQRLVADCILMDVDTAVVSDRKGSIAVLSCSNHLEEL 1201

Query: 948  -----------DNASPESNLALNCSYYMGEIAMSIRKGSLLYKLPGDDAFRGCDVANTVF 802
                       DNASPE NL LNCSYYMGEIAMSI+KGS  YKLP DD  +GCD +NT+ 
Sbjct: 1202 HGFKFLIISCPDNASPECNLTLNCSYYMGEIAMSIKKGSFSYKLPADDVLKGCDGSNTII 1261

Query: 801  NLSCNSILVSTLLGSIISFVPLSREEYEILEAVQTRLVVHPLTAPILGNDHNEFRSRESA 622
            + S NSI+  TLLGSII  +P+SREE+E+LEAVQ RL VH LTAPILGNDHNEFRSRE++
Sbjct: 1262 DFSENSIMAGTLLGSIIMLIPISREEHELLEAVQARLAVHQLTAPILGNDHNEFRSRENS 1321

Query: 621  ATVPRILDGDMLAQFLELTSMQQEAVLSLPLGSPKTVMLSLKSS-PPPITANQVVRILER 445
            A V +ILDGDMLAQFLELTSMQQEAVL+LPLGS +TV  S K +   PI+ N+VV++LER
Sbjct: 1322 AGVSKILDGDMLAQFLELTSMQQEAVLALPLGSLETVTSSSKQTLLSPISVNRVVQLLER 1381

Query: 444  VHYALN 427
            VHYALN
Sbjct: 1382 VHYALN 1387


>ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-like [Cucumis sativus]
          Length = 1376

 Score =  771 bits (1990), Expect = 0.0
 Identities = 389/532 (73%), Positives = 446/532 (83%)
 Frame = -1

Query: 2022 SDRPWLLQTARHSLMYTSISFQPSTHATPVCSAECPNGVLFVAENSLHLVEMVQSKRLNV 1843
            SDRPWLL +ARHSL YTSISFQPSTH TPVCSA+CP+G+LFVAE+SLHLVEMV +KRLNV
Sbjct: 846  SDRPWLLHSARHSLSYTSISFQPSTHVTPVCSADCPSGLLFVAESSLHLVEMVHTKRLNV 905

Query: 1842 QKFPLGGTPRKVLYHNESRLLLVMRNDLSNDSYSSDICYVDPLSGSILSSFKLDPGETGK 1663
            QKF LGGTPRKVLYH+ES+LLLVMR  L ND+ SSDIC VDPLSGSILSS KL+ GETGK
Sbjct: 906  QKFHLGGTPRKVLYHSESKLLLVMRTQLINDTSSSDICCVDPLSGSILSSHKLEIGETGK 965

Query: 1662 CMELVKVGHEHVLVIGTSLSAGPSIMPSGEAESSSQGRLIVLSLEHRQNSDSGSMTHGSK 1483
             MELV+ G+E VLV+GTSLS+GP+IM SGEAES+ +GRLIVL LEH QNSD+GSMT  SK
Sbjct: 966  SMELVRNGNEQVLVVGTSLSSGPAIMASGEAEST-KGRLIVLCLEHVQNSDTGSMTFCSK 1024

Query: 1482 ASSSSQRTSPFRDVTGYAAEQLSSSSMCSSPDENNFDGIKLEETEAWSMKLCYSTKLSGM 1303
            A  SS + SPFR++ GYA EQLSSSS+CSSPD+ + DGIKLEETEAW +++ YST L GM
Sbjct: 1025 AGLSSLQASPFREIVGYATEQLSSSSLCSSPDDASSDGIKLEETEAWQLRVVYSTSLPGM 1084

Query: 1302 VLAVCPYLDRFFLASAGCVFYVCGFPNDNYQRVRRLAVARTRFMIRTLTAHFTRIAVGDC 1123
            VLA+CPYLDR+FLASAG  FYVCGFPND++QRV+R AV RTRFMI +LTAH  RIAVGDC
Sbjct: 1085 VLAICPYLDRYFLASAGNAFYVCGFPNDSFQRVKRFAVGRTRFMITSLTAHVNRIAVGDC 1144

Query: 1122 RDGILFFSYHEDARKLEQLYCDPVQRLVADCMLMDADTAVVSDRKGSVAILSRPSHLEDN 943
            RDGILFFSY EDA+KLEQ+Y DP QRLVADC L+D DTAVVSDRKGS+AILS    LEDN
Sbjct: 1145 RDGILFFSYQEDAKKLEQIYSDPSQRLVADCTLLDVDTAVVSDRKGSIAILSCSDRLEDN 1204

Query: 942  ASPESNLALNCSYYMGEIAMSIRKGSLLYKLPGDDAFRGCDVANTVFNLSCNSILVSTLL 763
            ASPE NL LNC+YYMGEIAM++RKGS  YKLP DD  RGC V  + F+ S N+I+ STLL
Sbjct: 1205 ASPECNLTLNCAYYMGEIAMTLRKGSFSYKLPADDLLRGCAVPGSDFDSSHNTIIASTLL 1264

Query: 762  GSIISFVPLSREEYEILEAVQTRLVVHPLTAPILGNDHNEFRSRESAATVPRILDGDMLA 583
            GSI+ F PLSR+EYE+LEAVQ +L VHPLT+PILGNDH E+RSRE+   VP+ILDGD+L 
Sbjct: 1265 GSIVIFTPLSRDEYELLEAVQAKLAVHPLTSPILGNDHYEYRSRENPIGVPKILDGDILT 1324

Query: 582  QFLELTSMQQEAVLSLPLGSPKTVMLSLKSSPPPITANQVVRILERVHYALN 427
            QFLELTSMQQE VLS  +GS   V  S KS P  I  NQVV++LER+HYALN
Sbjct: 1325 QFLELTSMQQELVLSSSVGSLSAVKPSSKSMPASIPINQVVQLLERIHYALN 1376


>ref|XP_002882757.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297328597|gb|EFH59016.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1384

 Score =  724 bits (1869), Expect = 0.0
 Identities = 364/547 (66%), Positives = 438/547 (80%), Gaps = 15/547 (2%)
 Frame = -1

Query: 2022 SDRPWLLQTARHSLMYTSISFQPSTHATPVCSAECPNGVLFVAENSLHLVEMVQSKRLNV 1843
            SDRPWLLQTAR SL YTSISFQPSTHATPVCS+ECP G+LFV+EN LHLVEMV SKR N 
Sbjct: 841  SDRPWLLQTARQSLSYTSISFQPSTHATPVCSSECPQGILFVSENCLHLVEMVHSKRRNA 900

Query: 1842 QKFPLGGTPRKVLYHNESRLLLVMRNDLSNDSYSSDICYVDPLSGSILSSFKLDPGETGK 1663
            QKF LGGTPRKV+YH+ES+LL+VMR DL  D+ +SDIC VDPLSGS+LSS+KL PGETGK
Sbjct: 901  QKFHLGGTPRKVIYHSESKLLIVMRTDLY-DTCTSDICCVDPLSGSVLSSYKLKPGETGK 959

Query: 1662 CMELVKVGHEHVLVIGTSLSAGPSIMPSGEAESSSQGRLIVLSLEHRQNSDSGSMTHGSK 1483
             MELV+VG+EHVLV+GTSLS+GP+I+PSGEAES+ +GRLI+L LEH QNSDSGSMT  SK
Sbjct: 960  SMELVRVGNEHVLVVGTSLSSGPAILPSGEAEST-KGRLIILCLEHTQNSDSGSMTICSK 1018

Query: 1482 ASSSSQRTSPFRDVTGYAAEQLSSSSMCSSPDENNFDGIKLEETEAWSMKLCYSTKLSGM 1303
            A SSSQRTSPFRDV GY  EQLSSSS CSSPD+N++DGIK +E E W ++L  +T   GM
Sbjct: 1019 AGSSSQRTSPFRDVVGYTTEQLSSSSHCSSPDDNSYDGIKFDEAETWQLRLASATTWPGM 1078

Query: 1302 VLAVCPYLDRFFLASAGCVFYVCGFPNDNYQRVRRLAVARTRFMIRTLTAHFTRIAVGDC 1123
            VLA+CPYLD +FLASAG  FYVCGFPND+ +R++R AV RTRFMI +L  +FTRI VGDC
Sbjct: 1079 VLAICPYLDHYFLASAGNAFYVCGFPNDSPERMKRFAVGRTRFMITSLRTYFTRIVVGDC 1138

Query: 1122 RDGILFFSYHEDARKLEQLYCDPVQRLVADCMLMDADTAVVSDRKGSVAILSRPSHLE-- 949
            RDG+LF+SYHE+++KL Q+YCDP QRLVADC LMDA++  VSDRKGS+AILS   H E  
Sbjct: 1139 RDGVLFYSYHEESKKLHQIYCDPAQRLVADCFLMDANSVAVSDRKGSIAILSCQDHSEFG 1198

Query: 948  ------------DNASPESNLALNCSYYMGEIAMSIRKGSLLYKLPGDDAFRGCDVANTV 805
                        + +SPESNL LNC+YYMGEIAM+I+KG  +YKLP DD  R   ++ ++
Sbjct: 1199 TKHLAFSPRDDPEYSSPESNLNLNCAYYMGEIAMAIKKGCNIYKLPADDVLRSYGLSKSI 1258

Query: 804  FNLSCNSILVSTLLGSIISFVPLSREEYEILEAVQTRLVVHPLTAPILGNDHNEFRSRES 625
             + + ++I+  TLLGSI  F P+S EEYE+LEAVQ +L +HPLTAP+LGNDHNEFR RE+
Sbjct: 1259 -DTADDTIIAGTLLGSIFVFAPISSEEYELLEAVQAKLGIHPLTAPVLGNDHNEFRGREN 1317

Query: 624  AATVPRILDGDMLAQFLELTSMQQEAVLSLPLGSPKTVMLSLKS-SPPPITANQVVRILE 448
             +   +ILDGDMLAQFLELT+ QQE+VL  P  SP T   S K  S PP+  +QVV++LE
Sbjct: 1318 PSQATKILDGDMLAQFLELTNRQQESVLLTPQPSPSTSKASSKQRSSPPLMLHQVVQLLE 1377

Query: 447  RVHYALN 427
            RVHYAL+
Sbjct: 1378 RVHYALH 1384


>ref|NP_187802.2| Cleavage and polyadenylation specificity factor (CPSF) A subunit
            protein [Arabidopsis thaliana] gi|29824376|gb|AAP04148.1|
            unknown protein [Arabidopsis thaliana]
            gi|110739103|dbj|BAF01468.1| hypothetical protein
            [Arabidopsis thaliana] gi|332641608|gb|AEE75129.1|
            Cleavage and polyadenylation specificity factor (CPSF) A
            subunit protein [Arabidopsis thaliana]
          Length = 1379

 Score =  721 bits (1862), Expect = 0.0
 Identities = 362/539 (67%), Positives = 436/539 (80%), Gaps = 7/539 (1%)
 Frame = -1

Query: 2022 SDRPWLLQTARHSLMYTSISFQPSTHATPVCSAECPNGVLFVAENSLHLVEMVQSKRLNV 1843
            SDRPWLLQTAR SL YTSISFQPSTHATPVCS ECP G+LFV+EN LHLVEMV SKR N 
Sbjct: 844  SDRPWLLQTARQSLSYTSISFQPSTHATPVCSFECPQGILFVSENCLHLVEMVHSKRRNA 903

Query: 1842 QKFPLGGTPRKVLYHNESRLLLVMRNDLSNDSYSSDICYVDPLSGSILSSFKLDPGETGK 1663
            QKF LGGTPRKV+YH+ES+LL+VMR DL  D+ +SDIC VDPLSGS+LSS+KL PGETGK
Sbjct: 904  QKFQLGGTPRKVIYHSESKLLIVMRTDLY-DTCTSDICCVDPLSGSVLSSYKLKPGETGK 962

Query: 1662 CMELVKVGHEHVLVIGTSLSAGPSIMPSGEAESSSQGRLIVLSLEHRQNSDSGSMTHGSK 1483
             MELV+VG+EHVLV+GTSLS+GP+I+PSGEAES+ +GR+I+L LEH QNSDSGSMT  SK
Sbjct: 963  SMELVRVGNEHVLVVGTSLSSGPAILPSGEAEST-KGRVIILCLEHTQNSDSGSMTICSK 1021

Query: 1482 ASSSSQRTSPFRDVTGYAAEQLSSSSMCSSPDENNFDGIKLEETEAWSMKLCYSTKLSGM 1303
            A SSSQRTSPF DV GY  E LSSSS+CSSPD+ ++DGIKL+E E W ++L  ST   GM
Sbjct: 1022 ACSSSQRTSPFHDVVGYTTENLSSSSLCSSPDDYSYDGIKLDEAETWQLRLASSTTWPGM 1081

Query: 1302 VLAVCPYLDRFFLASAGCVFYVCGFPNDNYQRVRRLAVARTRFMIRTLTAHFTRIAVGDC 1123
            VLA+CPYLD +FLASAG  FYVCGFPND+ +R++R AV RTRFMI +L  +FTRI VGDC
Sbjct: 1082 VLAICPYLDHYFLASAGNAFYVCGFPNDSPERMKRFAVGRTRFMITSLRTYFTRIVVGDC 1141

Query: 1122 RDGILFFSYHEDARKLEQLYCDPVQRLVADCMLMDADTAVVSDRKGSVAILSRPSHLE-- 949
            RDG+LF+SYHE+++KL Q+YCDP QRLVADC LMDA++  VSDRKGS+AILS   H +  
Sbjct: 1142 RDGVLFYSYHEESKKLHQIYCDPAQRLVADCFLMDANSVAVSDRKGSIAILSCKDHSDFG 1201

Query: 948  ----DNASPESNLALNCSYYMGEIAMSIRKGSLLYKLPGDDAFRGCDVANTVFNLSCNSI 781
                + +SPESNL LNC+YYMGEIAMSI+KG  +YKLP DD  R   ++ ++ + + ++I
Sbjct: 1202 MKHLEYSSPESNLNLNCAYYMGEIAMSIKKGCNIYKLPADDVLRSYGLSKSI-DTADDTI 1260

Query: 780  LVSTLLGSIISFVPLSREEYEILEAVQTRLVVHPLTAPILGNDHNEFRSRESAATVPRIL 601
            +  TLLGSI  F P+S EEYE+LE VQ +L +HPLTAP+LGNDHNEFR RE+ +   +IL
Sbjct: 1261 IAGTLLGSIFVFAPISSEEYELLEGVQAKLGIHPLTAPVLGNDHNEFRGRENPSQARKIL 1320

Query: 600  DGDMLAQFLELTSMQQEAVLSLPLGSPKTVMLSLKS-SPPPITANQVVRILERVHYALN 427
            DGDMLAQFLELT+ QQE+VLS P  SP T   S K  S PP+  +QVV++LERVHYAL+
Sbjct: 1321 DGDMLAQFLELTNRQQESVLSTPQPSPSTSKASSKQRSFPPLMLHQVVQLLERVHYALH 1379