BLASTX nr result

ID: Cnidium21_contig00007239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007239
         (1164 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263208.1| PREDICTED: TIM21-like protein, mitochondrial...   285   2e-74
ref|NP_001031562.1| uncharacterized protein [Arabidopsis thalian...   273   8e-71
ref|XP_002302508.1| predicted protein [Populus trichocarpa] gi|2...   273   8e-71
ref|XP_002872975.1| hypothetical protein ARALYDRAFT_912250 [Arab...   271   2e-70
ref|XP_002326838.1| predicted protein [Populus trichocarpa] gi|2...   271   2e-70

>ref|XP_002263208.1| PREDICTED: TIM21-like protein, mitochondrial [Vitis vinifera]
           gi|296088479|emb|CBI37470.3| unnamed protein product
           [Vitis vinifera]
          Length = 314

 Score =  285 bits (728), Expect = 2e-74
 Identities = 142/225 (63%), Positives = 166/225 (73%), Gaps = 4/225 (1%)
 Frame = +2

Query: 245 GPTGIGGLFRRYQTNNCLVKYRSPYHLTKTKTADPAMSFFARAFASQTSKGKDS----SK 412
           G  G   L  R+QT   +V + SPY   +T      +  FAR+ AS  SK  +     ++
Sbjct: 89  GVDGTSVLSARWQTRERIVGFCSPYRPIETHGKSTVVPCFARSCASTASKSPEEKQSETR 148

Query: 413 REISTVEDPFDAPTYNIPQKPVTFTEGASYSLVXXXXXXXXXXXXYGVFSELIFSPKEYK 592
           ++ISTVEDPFDAPTYNIP+KPVTF EGASYS++            Y VF ELIF PKEYK
Sbjct: 149 KDISTVEDPFDAPTYNIPEKPVTFAEGASYSVIILVGLGIAAAAGYAVFKELIFEPKEYK 208

Query: 593 VFGIALKRVQNDSQVSVRIGSPVTGYGQDSRNRAARQRIPHRIWTDEDGVEHVEVNFFVR 772
           +FG ALKRVQ D QV VRIGSP+TGYGQ+SRNRAARQRI +RIWTDEDGVEHVEVNF++R
Sbjct: 209 IFGKALKRVQEDGQVRVRIGSPITGYGQESRNRAARQRISNRIWTDEDGVEHVEVNFYIR 268

Query: 773 GPHGYGKVFTEMFKDKEEKQWKFTYMIVEIDSPSKAQLMLESYIP 907
           GPHG GKV+TEMFKDK +KQWKFTY+I EI SPS AQLMLESY+P
Sbjct: 269 GPHGAGKVYTEMFKDKVDKQWKFTYLIAEIKSPSPAQLMLESYVP 313


>ref|NP_001031562.1| uncharacterized protein [Arabidopsis thaliana]
           gi|449061898|sp|Q1G3L1.1|TIM21_ARATH RecName:
           Full=Probable mitochondrial import inner membrane
           translocase subunit TIM21; AltName: Full=Protein
           SEGREGATION DISTORTION 3; Flags: Precursor
           gi|98961813|gb|ABF59236.1| unknown protein [Arabidopsis
           thaliana] gi|110737180|dbj|BAF00539.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332656415|gb|AEE81815.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 269

 Score =  273 bits (697), Expect = 8e-71
 Identities = 141/253 (55%), Positives = 180/253 (71%), Gaps = 4/253 (1%)
 Frame = +2

Query: 161 ASVSKSSNGLFSDVGSASANDITNRGLLGPTGIGGLFRRYQTNNCLVKYRSPYHLTKTKT 340
           + + KSS  +FS       N   ++   G  G+   FR  Q + C          T+ + 
Sbjct: 33  SGIPKSSKRVFS-------NSFLSKDSTGANGLLFRFRNPQASIC----------TEARP 75

Query: 341 ADPAMSFFARAFASQTSKG----KDSSKREISTVEDPFDAPTYNIPQKPVTFTEGASYSL 508
            +   S+F R+FAS+TSK     ++ +K+E++TVEDPFD+PTY+IP+KPVTFTEGASYSL
Sbjct: 76  KNINSSYFTRSFASRTSKEPGNQQNKAKKEVTTVEDPFDSPTYHIPEKPVTFTEGASYSL 135

Query: 509 VXXXXXXXXXXXXYGVFSELIFSPKEYKVFGIALKRVQNDSQVSVRIGSPVTGYGQDSRN 688
           V            YGVF ELIF PKEYKVF  ALKR+Q+D QV VRIGSP+ GYGQ++RN
Sbjct: 136 VILAGLGVAGAAGYGVFKELIFQPKEYKVFDKALKRIQDDGQVRVRIGSPIKGYGQETRN 195

Query: 689 RAARQRIPHRIWTDEDGVEHVEVNFFVRGPHGYGKVFTEMFKDKEEKQWKFTYMIVEIDS 868
           RAARQRIP+R++TDEDGVEHVEVNF++RGP G GKV+TEMFKDK EK+WK+TY+IVEI +
Sbjct: 196 RAARQRIPNRVFTDEDGVEHVEVNFYIRGPQGAGKVYTEMFKDKAEKEWKYTYLIVEILT 255

Query: 869 PSKAQLMLESYIP 907
           PS A+LMLESY+P
Sbjct: 256 PSPAKLMLESYLP 268


>ref|XP_002302508.1| predicted protein [Populus trichocarpa] gi|222844234|gb|EEE81781.1|
           predicted protein [Populus trichocarpa]
          Length = 238

 Score =  273 bits (697), Expect = 8e-71
 Identities = 133/226 (58%), Positives = 167/226 (73%), Gaps = 4/226 (1%)
 Frame = +2

Query: 254 GIGGLFRRYQTNNCLVKYRSPYHLTKTKTADPAMSFFARAFASQTSKGK----DSSKREI 421
           GI  ++        LV  RS + + +T         FAR+FAS+ SK +      +K+++
Sbjct: 12  GIPAIYGGQPNREYLVSLRSSFQIMETHGESTINICFARSFASKASKKETHKQSETKKDV 71

Query: 422 STVEDPFDAPTYNIPQKPVTFTEGASYSLVXXXXXXXXXXXXYGVFSELIFSPKEYKVFG 601
           STVEDPFDAPTYNIP+KPVTFTEGASYS++            Y VF ELIF PKEYK+F 
Sbjct: 72  STVEDPFDAPTYNIPEKPVTFTEGASYSIIILAGLAVAAAAAYAVFKELIFEPKEYKIFN 131

Query: 602 IALKRVQNDSQVSVRIGSPVTGYGQDSRNRAARQRIPHRIWTDEDGVEHVEVNFFVRGPH 781
            ALKR+Q+DSQV VRIGSP+TGYGQ+SRNRAARQRIP+RI+TDEDGVEHV++NF++RGPH
Sbjct: 132 KALKRIQDDSQVRVRIGSPITGYGQESRNRAARQRIPNRIFTDEDGVEHVQINFYIRGPH 191

Query: 782 GYGKVFTEMFKDKEEKQWKFTYMIVEIDSPSKAQLMLESYIPGVAA 919
           G GKV  EMFKDK +KQWK+TY+IVE+  PS++QL+LESY+P   A
Sbjct: 192 GAGKVSAEMFKDKVDKQWKYTYLIVEVMQPSRSQLILESYMPAPVA 237


>ref|XP_002872975.1| hypothetical protein ARALYDRAFT_912250 [Arabidopsis lyrata subsp.
           lyrata] gi|297318812|gb|EFH49234.1| hypothetical protein
           ARALYDRAFT_912250 [Arabidopsis lyrata subsp. lyrata]
          Length = 270

 Score =  271 bits (694), Expect = 2e-70
 Identities = 137/224 (61%), Positives = 172/224 (76%), Gaps = 8/224 (3%)
 Frame = +2

Query: 260 GGLFRRYQT--NNCLVKYRSPYH--LTKTKTADPAMSFFARAFASQTSKG----KDSSKR 415
           GG  R+  T  N  L ++R+P     T+ +  +   S+F R+FAS+TSK     ++ +K+
Sbjct: 46  GGASRQDSTGANGLLFRFRNPQASICTEARPKNINSSYFTRSFASRTSKEPGNQQNKAKK 105

Query: 416 EISTVEDPFDAPTYNIPQKPVTFTEGASYSLVXXXXXXXXXXXXYGVFSELIFSPKEYKV 595
           E++TVEDPFD+PTY+IP KPVTFTEGASYSLV            YGVF ELIF PKEYKV
Sbjct: 106 EVTTVEDPFDSPTYHIPDKPVTFTEGASYSLVILAGLGVAGAAGYGVFKELIFQPKEYKV 165

Query: 596 FGIALKRVQNDSQVSVRIGSPVTGYGQDSRNRAARQRIPHRIWTDEDGVEHVEVNFFVRG 775
           F  ALKR+Q+D QV VRIGSP+ GYGQ++RNRAARQRIP+R++TDEDGVEHVEVNF++RG
Sbjct: 166 FDKALKRIQDDGQVRVRIGSPIKGYGQETRNRAARQRIPNRVFTDEDGVEHVEVNFYIRG 225

Query: 776 PHGYGKVFTEMFKDKEEKQWKFTYMIVEIDSPSKAQLMLESYIP 907
           P G GKV+TEMFKDK EK+WK+TY+IVEI +PS A+LMLESY+P
Sbjct: 226 PQGAGKVYTEMFKDKAEKEWKYTYLIVEILTPSPAKLMLESYLP 269


>ref|XP_002326838.1| predicted protein [Populus trichocarpa] gi|222835153|gb|EEE73588.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score =  271 bits (694), Expect = 2e-70
 Identities = 137/239 (57%), Positives = 173/239 (72%), Gaps = 5/239 (2%)
 Frame = +2

Query: 206 SASANDITNRGLLG-PTGIGGLFRRYQTNNCLVKYRSPYHLTKTKTADPAMSFFARAFAS 382
           +++AN +T    LG P   GG   R     CLV   SP+ + +           AR+FAS
Sbjct: 65  ASNANHLTKVRWLGIPAMYGGKSNR----ECLVSLGSPFQIMENHGGSTINICVARSFAS 120

Query: 383 QTSK----GKDSSKREISTVEDPFDAPTYNIPQKPVTFTEGASYSLVXXXXXXXXXXXXY 550
           + SK     +  +++++STVEDPFDAPTYNIP+KPVTFTEGASYS++            Y
Sbjct: 121 KASKKETRNQSETRKDLSTVEDPFDAPTYNIPEKPVTFTEGASYSIIILAGLGVAAAAAY 180

Query: 551 GVFSELIFSPKEYKVFGIALKRVQNDSQVSVRIGSPVTGYGQDSRNRAARQRIPHRIWTD 730
            VF ELIF PKEYK+F  ALKR+Q+DSQV VRIGSP+TGYGQ+SRNRAARQRIP+RI+TD
Sbjct: 181 AVFKELIFEPKEYKIFNKALKRIQDDSQVRVRIGSPITGYGQESRNRAARQRIPNRIFTD 240

Query: 731 EDGVEHVEVNFFVRGPHGYGKVFTEMFKDKEEKQWKFTYMIVEIDSPSKAQLMLESYIP 907
           EDGVEHV++NF++RGPHG GKV  EMFKDK +KQWK+TY+IVE   PS++QL+LESY+P
Sbjct: 241 EDGVEHVQINFYIRGPHGAGKVSAEMFKDKVDKQWKYTYLIVETMQPSRSQLILESYMP 299


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