BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007238
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|D9J034.1|WHY2_SOLTU RecName: Full=Single-stranded DNA-bindig ...   147   7e-34
ref|XP_002303313.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
gb|ABK94132.1| unknown [Populus trichocarpa]                          140   1e-31
pdb|3R9Y|A Chain A, Crystal Structure Of Stwhy2 K67a (Form I) gi...   129   3e-28
pdb|3N1H|A Chain A, Crystal Structure Of Stwhy2 gi|302566180|pdb...   129   3e-28

>sp|D9J034.1|WHY2_SOLTU RecName: Full=Single-stranded DNA-bindig protein WHY2,
           mitochondrial; AltName: Full=Protein WHIRLY 2;
           Short=StWHY2; Flags: Precursor
           gi|298359665|gb|ADI77438.1| Why2 protein [Solanum
           tuberosum]
          Length = 238

 Score =  147 bits (372), Expect = 7e-34
 Identities = 72/99 (72%), Positives = 82/99 (82%)
 Frame = +1

Query: 1   DPSMKSSNAGQVRKTLQVKPHADGSGYFISLSVVNNVQKISERVTVPVTKAEFAVMRTAF 180
           DPSM SSNAGQVRK+L +KP+ADGSGYFISLSVVNN  K ++R TVPVT AEFAVMRTAF
Sbjct: 140 DPSMLSSNAGQVRKSLSIKPNADGSGYFISLSVVNNNLKTNDRFTVPVTTAEFAVMRTAF 199

Query: 181 SFALPHIMGWDRYINQPPKSIENSASMVDPRVKSLEWDR 297
           SFALPHIMGWDR+ N+P +SI  S S V P++   EWDR
Sbjct: 200 SFALPHIMGWDRFTNRPSESISQSPSKVVPQLMEAEWDR 238


>ref|XP_002303313.1| predicted protein [Populus trichocarpa] gi|222840745|gb|EEE78292.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score =  140 bits (353), Expect = 1e-31
 Identities = 66/99 (66%), Positives = 78/99 (78%)
 Frame = +1

Query: 1   DPSMKSSNAGQVRKTLQVKPHADGSGYFISLSVVNNVQKISERVTVPVTKAEFAVMRTAF 180
           DPSM SSNAGQVRK L +KPHADGSGYF+SLSVVNN+ K +ER TVPVT AEF V++TA 
Sbjct: 85  DPSMLSSNAGQVRKNLSIKPHADGSGYFVSLSVVNNILKTTERFTVPVTTAEFTVLKTAC 144

Query: 181 SFALPHIMGWDRYINQPPKSIENSASMVDPRVKSLEWDR 297
           SFALPHIMGWDR     P ++ +  S VDP++  LEWD+
Sbjct: 145 SFALPHIMGWDRLTTPLPGTLASKLSKVDPQMPDLEWDK 183


>gb|ABK94132.1| unknown [Populus trichocarpa]
          Length = 229

 Score =  140 bits (353), Expect = 1e-31
 Identities = 66/99 (66%), Positives = 78/99 (78%)
 Frame = +1

Query: 1   DPSMKSSNAGQVRKTLQVKPHADGSGYFISLSVVNNVQKISERVTVPVTKAEFAVMRTAF 180
           DPSM SSNAGQVRK L +KPHADGSGYF+SLSVVNN+ K +ER TVPVT AEF V++TA 
Sbjct: 131 DPSMLSSNAGQVRKNLSIKPHADGSGYFVSLSVVNNILKTTERFTVPVTTAEFTVLKTAC 190

Query: 181 SFALPHIMGWDRYINQPPKSIENSASMVDPRVKSLEWDR 297
           SFALPHIMGWDR     P ++ +  S VDP++  LEWD+
Sbjct: 191 SFALPHIMGWDRLTTPLPGTLASKLSKVDPQMPDLEWDK 229


>pdb|3R9Y|A Chain A, Crystal Structure Of Stwhy2 K67a (Form I)
           gi|347948613|pdb|3R9Z|A Chain A, Crystal Structure Of
           Stwhy2 K67a (Form Ii) gi|347948614|pdb|3RA0|A Chain A,
           Crystal Structure Of A Stwhy2 K67a-Dt32 Complex
          Length = 178

 Score =  129 bits (323), Expect = 3e-28
 Identities = 62/77 (80%), Positives = 69/77 (89%)
 Frame = +1

Query: 1   DPSMKSSNAGQVRKTLQVKPHADGSGYFISLSVVNNVQKISERVTVPVTKAEFAVMRTAF 180
           DPSM SSNAGQVRK+L +KP+ADGSGYFISLSVVNN  K ++R TVPVT AEFAVMRTAF
Sbjct: 94  DPSMLSSNAGQVRKSLSIKPNADGSGYFISLSVVNNNLKTNDRFTVPVTTAEFAVMRTAF 153

Query: 181 SFALPHIMGWDRYINQP 231
           SFALPHIMGWDR+ N+P
Sbjct: 154 SFALPHIMGWDRFTNRP 170


>pdb|3N1H|A Chain A, Crystal Structure Of Stwhy2 gi|302566180|pdb|3N1I|A Chain
           A, Crystal Structure Of A Stwhy2-Ere32 Complex
           gi|302566182|pdb|3N1J|A Chain A, Crystal Structure Of A
           Stwhy2-Dt32 Complex gi|302566184|pdb|3N1K|A Chain A,
           Crystal Structure Of A Stwhy2-Cere32 Complex
           gi|302566186|pdb|3N1L|A Chain A, Crystal Structure Of A
           Stwhy2-Rcere32 Complex
          Length = 178

 Score =  129 bits (323), Expect = 3e-28
 Identities = 62/77 (80%), Positives = 69/77 (89%)
 Frame = +1

Query: 1   DPSMKSSNAGQVRKTLQVKPHADGSGYFISLSVVNNVQKISERVTVPVTKAEFAVMRTAF 180
           DPSM SSNAGQVRK+L +KP+ADGSGYFISLSVVNN  K ++R TVPVT AEFAVMRTAF
Sbjct: 94  DPSMLSSNAGQVRKSLSIKPNADGSGYFISLSVVNNNLKTNDRFTVPVTTAEFAVMRTAF 153

Query: 181 SFALPHIMGWDRYINQP 231
           SFALPHIMGWDR+ N+P
Sbjct: 154 SFALPHIMGWDRFTNRP 170