BLASTX nr result

ID: Cnidium21_contig00007200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007200
         (903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADG58095.1| transcription factor [Lycoris longituba]                70   9e-10
gb|ADG58011.1| transcription factor [Lycoris longituba]                69   1e-09
gb|ADG57979.1| transcription factor [Lycoris longituba]                69   1e-09
ref|XP_002510689.1| DNA-binding protein MNB1B, putative [Ricinus...    69   2e-09
emb|CAA74403.1| HMG protein [Arabidopsis thaliana]                     67   4e-09

>gb|ADG58095.1| transcription factor [Lycoris longituba]
          Length = 190

 Score = 69.7 bits (169), Expect = 9e-10
 Identities = 49/131 (37%), Positives = 60/131 (45%), Gaps = 29/131 (22%)
 Frame = +3

Query: 66  HRNPSFFHH*L--------------GFAMKGGRSKAGTK---DERLSVKQSXXXXXXXXX 194
           H+ PSF +H L               FAMKGG+SKA T    D RLSVK+          
Sbjct: 1   HQAPSFSNHSLPTFSISSLFEALTLDFAMKGGKSKADTSKKADARLSVKRKAAEKPVKKP 60

Query: 195 XXXXXX------------SAFFVFMEGFRKQFKEENPNXXXXXXXXXXXXDRWRSMTDDD 338
                             SAFFVFME FRKQFKE+NPN            D+W+SM+  +
Sbjct: 61  AVKKAKEGKDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATE 120

Query: 339 KAPFVRTAEQR 371
           KAP+   A +R
Sbjct: 121 KAPYEAKAAKR 131


>gb|ADG58011.1| transcription factor [Lycoris longituba]
          Length = 171

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 44/107 (41%), Positives = 53/107 (49%), Gaps = 15/107 (14%)
 Frame = +3

Query: 96  LGFAMKGGRSKAGTK---DERLSVKQSXXXXXXXXXXXXXXX------------SAFFVF 230
           L FAMKGG+SKA T    D RLSVK+                            SAFFVF
Sbjct: 10  LDFAMKGGKSKADTSKKADARLSVKRKAAEKPVKKPAVKKAKEGKDPNKPKRPPSAFFVF 69

Query: 231 MEGFRKQFKEENPNXXXXXXXXXXXXDRWRSMTDDDKAPFVRTAEQR 371
           ME FRKQFKE+NPN            D+W+SM+  +KAP+   A +R
Sbjct: 70  MEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKAAKR 116


>gb|ADG57979.1| transcription factor [Lycoris longituba]
          Length = 179

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 44/107 (41%), Positives = 53/107 (49%), Gaps = 15/107 (14%)
 Frame = +3

Query: 96  LGFAMKGGRSKAGTK---DERLSVKQSXXXXXXXXXXXXXXX------------SAFFVF 230
           L FAMKGG+SKA T    D RLSVK+                            SAFFVF
Sbjct: 15  LDFAMKGGKSKADTSKKADARLSVKRKAAEKPAKKPAVKKAKEGKDPNKPKRPPSAFFVF 74

Query: 231 MEGFRKQFKEENPNXXXXXXXXXXXXDRWRSMTDDDKAPFVRTAEQR 371
           ME FRKQFKE+NPN            D+W+SM+  +KAP+   A +R
Sbjct: 75  MEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKAAKR 121


>ref|XP_002510689.1| DNA-binding protein MNB1B, putative [Ricinus communis]
           gi|223551390|gb|EEF52876.1| DNA-binding protein MNB1B,
           putative [Ricinus communis]
          Length = 145

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 38/95 (40%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
 Frame = +3

Query: 108 MKGGRSKAGTKDERLSVKQSXXXXXXXXXXXXXXX-------SAFFVFMEGFRKQFKEEN 266
           MKGG+SKA  K+ +LSV +                       SAFFVFME FR+Q+K+E+
Sbjct: 1   MKGGKSKADAKNSKLSVNKKPVKATKKAGKAAKDPNKPKRPASAFFVFMEEFREQYKKEH 60

Query: 267 PNXXXXXXXXXXXXDRWRSMTDDDKAPFVRTAEQR 371
           P             DRW+SM++ +KAPFV  AE+R
Sbjct: 61  PKNKSVAAVGKAGGDRWKSMSESEKAPFVAKAEKR 95


>emb|CAA74403.1| HMG protein [Arabidopsis thaliana]
          Length = 138

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 39/92 (42%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
 Frame = +3

Query: 108 MKGGRSKAG--TKDERLSVK--QSXXXXXXXXXXXXXXXSAFFVFMEGFRKQFKEENPNX 275
           MKGG SKAG  + D+RL  +  ++               SAFFVF+E FRK+F   NPN 
Sbjct: 1   MKGGESKAGATSTDQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNN 60

Query: 276 XXXXXXXXXXXDRWRSMTDDDKAPFVRTAEQR 371
                       RW+SMTD+DKAP+V  AE R
Sbjct: 61  KSVATVGKAAGARWKSMTDEDKAPYVAKAESR 92


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