BLASTX nr result

ID: Cnidium21_contig00007187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007187
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304511.1| predicted protein [Populus trichocarpa] gi|2...   190   9e-47
ref|NP_194077.1| beta-adaptin-like protein C [Arabidopsis thalia...   182   2e-44
gb|AAL57648.1| AT4g23460/F16G20_160 [Arabidopsis thaliana]            182   2e-44
ref|XP_003538073.1| PREDICTED: beta-adaptin-like protein C-like ...   182   3e-44
ref|XP_002298020.1| predicted protein [Populus trichocarpa] gi|2...   181   6e-44

>ref|XP_002304511.1| predicted protein [Populus trichocarpa] gi|222841943|gb|EEE79490.1|
            predicted protein [Populus trichocarpa]
          Length = 904

 Score =  190 bits (483), Expect = 9e-47
 Identities = 90/114 (78%), Positives = 105/114 (92%)
 Frame = +1

Query: 4    VLFTEDGRMERTSFLETWKSLPDSNEVLRDFPGILIDSLESTLDQLASSNMFFIAKRKNA 183
            V FTEDGRMER SFLETW+SLPDSNEV +DFPGI ++ +E+TLD+LA+SNMFFIAKRK+A
Sbjct: 790  VFFTEDGRMERGSFLETWRSLPDSNEVSKDFPGITVNGVEATLDRLAASNMFFIAKRKHA 849

Query: 184  NQEVLYLSAKIPRAIPFLIELTTVVGVPGLKCAIKTPNPEMASLFFEALESLLK 345
            NQ+V Y SAK+PR IPFL ELTTVVG+PG+KCAIKTPNPEMASLFFEA+E+LLK
Sbjct: 850  NQDVFYFSAKMPRGIPFLTELTTVVGIPGIKCAIKTPNPEMASLFFEAIETLLK 903


>ref|NP_194077.1| beta-adaptin-like protein C [Arabidopsis thaliana]
            gi|306531056|sp|O81742.2|APBLC_ARATH RecName:
            Full=Beta-adaptin-like protein C; Short=At-bC-Ad;
            Short=At-betaC-Ad; AltName: Full=AP complex subunit
            beta-C; AltName: Full=Adaptor protein complex AP subunit
            beta-C; AltName: Full=Beta-adaptin C; AltName:
            Full=Clathrin assembly protein complex beta large chain C
            gi|332659361|gb|AEE84761.1| beta-adaptin-like protein C
            [Arabidopsis thaliana]
          Length = 893

 Score =  182 bits (462), Expect = 2e-44
 Identities = 88/114 (77%), Positives = 101/114 (88%)
 Frame = +1

Query: 7    LFTEDGRMERTSFLETWKSLPDSNEVLRDFPGILIDSLESTLDQLASSNMFFIAKRKNAN 186
            LF+EDGRMER +FLETWKSLPDSNEV ++FPGI I S+ESTLD LA+SNMFFIAKRKN N
Sbjct: 780  LFSEDGRMERGTFLETWKSLPDSNEVQKEFPGITITSVESTLDLLAASNMFFIAKRKNGN 839

Query: 187  QEVLYLSAKIPRAIPFLIELTTVVGVPGLKCAIKTPNPEMASLFFEALESLLKS 348
            Q+VLYLSAK+PR IPFLIELT +VG PGLKCA+KTP PE+A LFFEA+E L K+
Sbjct: 840  QDVLYLSAKVPRGIPFLIELTAIVGQPGLKCAVKTPTPEIAPLFFEAVEILFKA 893


>gb|AAL57648.1| AT4g23460/F16G20_160 [Arabidopsis thaliana]
          Length = 893

 Score =  182 bits (462), Expect = 2e-44
 Identities = 88/114 (77%), Positives = 101/114 (88%)
 Frame = +1

Query: 7    LFTEDGRMERTSFLETWKSLPDSNEVLRDFPGILIDSLESTLDQLASSNMFFIAKRKNAN 186
            LF+EDGRMER +FLETWKSLPDSNEV ++FPGI I S+ESTLD LA+SNMFFIAKRKN N
Sbjct: 780  LFSEDGRMERGTFLETWKSLPDSNEVQKEFPGITITSVESTLDLLAASNMFFIAKRKNGN 839

Query: 187  QEVLYLSAKIPRAIPFLIELTTVVGVPGLKCAIKTPNPEMASLFFEALESLLKS 348
            Q+VLYLSAK+PR IPFLIELT +VG PGLKCA+KTP PE+A LFFEA+E L K+
Sbjct: 840  QDVLYLSAKVPRGIPFLIELTAIVGQPGLKCAVKTPTPEIAPLFFEAVEILFKA 893


>ref|XP_003538073.1| PREDICTED: beta-adaptin-like protein C-like [Glycine max]
          Length = 898

 Score =  182 bits (461), Expect = 3e-44
 Identities = 85/114 (74%), Positives = 105/114 (92%)
 Frame = +1

Query: 1    LVLFTEDGRMERTSFLETWKSLPDSNEVLRDFPGILIDSLESTLDQLASSNMFFIAKRKN 180
            LV FTEDGRMER+SFLETW+SLPDSNEV +DFP I+I + ++TL++LA+SNMFFIAKRKN
Sbjct: 783  LVFFTEDGRMERSSFLETWRSLPDSNEVSKDFPAIVIGNADATLERLAASNMFFIAKRKN 842

Query: 181  ANQEVLYLSAKIPRAIPFLIELTTVVGVPGLKCAIKTPNPEMASLFFEALESLL 342
            ANQ+V Y SAK+PR IPFLIELTT++G PG+KCAIKTP+PEM++LFFEA+E+LL
Sbjct: 843  ANQDVFYFSAKLPRGIPFLIELTTLIGNPGVKCAIKTPSPEMSALFFEAIETLL 896


>ref|XP_002298020.1| predicted protein [Populus trichocarpa] gi|222845278|gb|EEE82825.1|
            predicted protein [Populus trichocarpa]
          Length = 904

 Score =  181 bits (459), Expect = 6e-44
 Identities = 87/115 (75%), Positives = 101/115 (87%)
 Frame = +1

Query: 4    VLFTEDGRMERTSFLETWKSLPDSNEVLRDFPGILIDSLESTLDQLASSNMFFIAKRKNA 183
            V FTEDGRMER SFLE+W+SLPDSNEV RD P I ++ +ESTLD+LA+SNMFFIAKRK++
Sbjct: 790  VFFTEDGRMERGSFLESWRSLPDSNEVSRDLPDITVNGVESTLDRLAASNMFFIAKRKHS 849

Query: 184  NQEVLYLSAKIPRAIPFLIELTTVVGVPGLKCAIKTPNPEMASLFFEALESLLKS 348
            NQ+V Y S KIPR + FLIELTTVVG PG+KCAIKTPNPEMA LFFEA+E+LLKS
Sbjct: 850  NQDVFYFSTKIPRGVAFLIELTTVVGTPGVKCAIKTPNPEMAPLFFEAIETLLKS 904


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