BLASTX nr result

ID: Cnidium21_contig00007172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007172
         (1229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268264.1| PREDICTED: protein TIC 22-like, chloroplasti...   265   1e-68
ref|XP_004138357.1| PREDICTED: protein TIC 22-like, chloroplasti...   249   1e-63
ref|XP_002301750.1| predicted protein [Populus trichocarpa] gi|2...   249   1e-63
ref|XP_003524917.1| PREDICTED: uncharacterized protein LOC100811...   244   3e-62
ref|XP_002883453.1| hypothetical protein ARALYDRAFT_479887 [Arab...   243   7e-62

>ref|XP_002268264.1| PREDICTED: protein TIC 22-like, chloroplastic [Vitis vinifera]
          Length = 293

 Score =  265 bits (678), Expect = 1e-68
 Identities = 134/198 (67%), Positives = 157/198 (79%)
 Frame = -3

Query: 912 RLAGVPVYALSNPSDEFXXXXXXXXXXXXXLFCFKEEDVNTLLDQMKLMDPTMRNGSKVV 733
           RLAGVPVYALSN SDEF             LFC K+ED  TLL+QMKLMDP MR GSKVV
Sbjct: 93  RLAGVPVYALSNSSDEFVLVSGVRTGKSLGLFCLKKEDAETLLEQMKLMDPGMRQGSKVV 152

Query: 732 AVALNKVFQLKVDGVGFRLIPDSTQITNAIAERKRAGSSDGSFSGVPVFQSRSLILKSQK 553
           AVALNKVFQLK+DGV FRL+PDSTQ+ NA+   ++AG SD  FSGVPVFQSRSLIL+SQ 
Sbjct: 153 AVALNKVFQLKLDGVAFRLMPDSTQVKNALRVMEKAGFSDDGFSGVPVFQSRSLILQSQD 212

Query: 552 TRYRPVFFRKEDLENSLRKASSDQRKMNPALREGDIQVAVFEDIILGMKDNSSSEWDDVV 373
            +YRPVFFRKEDLENSL  AS+ Q ++NPA R+GDIQVAVFE+II GM++N+S +WDDVV
Sbjct: 213 KKYRPVFFRKEDLENSLLSASNQQNRLNPAFRQGDIQVAVFEEIIKGMQENASRQWDDVV 272

Query: 372 FIPPGFDVTSDSSQRRVS 319
           FIPPGFD +  S Q++ +
Sbjct: 273 FIPPGFDASISSPQQQAT 290


>ref|XP_004138357.1| PREDICTED: protein TIC 22-like, chloroplastic-like [Cucumis
           sativus] gi|449496760|ref|XP_004160220.1| PREDICTED:
           protein TIC 22-like, chloroplastic-like [Cucumis
           sativus]
          Length = 301

 Score =  249 bits (636), Expect = 1e-63
 Identities = 125/196 (63%), Positives = 151/196 (77%)
 Frame = -3

Query: 912 RLAGVPVYALSNPSDEFXXXXXXXXXXXXXLFCFKEEDVNTLLDQMKLMDPTMRNGSKVV 733
           RLAG+PVYALSN S+EF             LFCFK++D  TLL  +  MDP+ R GSKVV
Sbjct: 106 RLAGIPVYALSNASEEFVLVSGASAQKSLGLFCFKKDDAETLLQHIGTMDPSARYGSKVV 165

Query: 732 AVALNKVFQLKVDGVGFRLIPDSTQITNAIAERKRAGSSDGSFSGVPVFQSRSLILKSQK 553
            VALNKVFQL V+GV FRLIP+ +Q+ NA+ ERK+AG S   FSGVPVFQS+SLIL+ Q 
Sbjct: 166 PVALNKVFQLNVNGVAFRLIPECSQVKNALTERKKAGISADGFSGVPVFQSKSLILRVQN 225

Query: 552 TRYRPVFFRKEDLENSLRKASSDQRKMNPALREGDIQVAVFEDIILGMKDNSSSEWDDVV 373
             YRP FFRKEDLENSL++AS +Q ++NPALR GDIQVAVFE+II GMKDNS S WDD+V
Sbjct: 226 KSYRPAFFRKEDLENSLQRASREQNQINPALRPGDIQVAVFEEIIKGMKDNSISTWDDIV 285

Query: 372 FIPPGFDVTSDSSQRR 325
           FIPPGFDV++D  +++
Sbjct: 286 FIPPGFDVSTDPKKQQ 301


>ref|XP_002301750.1| predicted protein [Populus trichocarpa] gi|222843476|gb|EEE81023.1|
           predicted protein [Populus trichocarpa]
          Length = 299

 Score =  249 bits (636), Expect = 1e-63
 Identities = 128/196 (65%), Positives = 153/196 (78%), Gaps = 1/196 (0%)
 Frame = -3

Query: 912 RLAGVPVYALSNPSDEFXXXXXXXXXXXXXLFCFKEEDVNTLLDQMKLMDPTMRNG-SKV 736
           RLAGVPVYALSN ++EF             LFCFK+ED   LL+QMK MDP MR G SKV
Sbjct: 104 RLAGVPVYALSNSNEEFVLVSGLSTGKSLGLFCFKQEDAEALLEQMKSMDPGMRKGGSKV 163

Query: 735 VAVALNKVFQLKVDGVGFRLIPDSTQITNAIAERKRAGSSDGSFSGVPVFQSRSLILKSQ 556
           V VALNKVFQLKVDGV FRLIP+ +Q+ NA+ ER+RAG SD  FSGVPVFQSRSL+LKSQ
Sbjct: 164 VPVALNKVFQLKVDGVAFRLIPEPSQVKNALMERERAGLSDDCFSGVPVFQSRSLVLKSQ 223

Query: 555 KTRYRPVFFRKEDLENSLRKASSDQRKMNPALREGDIQVAVFEDIILGMKDNSSSEWDDV 376
              YRPVFFRKEDLE SL +AS +Q K+NPA ++GDI+VAVFE+II  MK+ S++ WDDV
Sbjct: 224 NRSYRPVFFRKEDLEKSLLRASREQHKVNPAFKQGDIEVAVFEEIIKCMKEGSATTWDDV 283

Query: 375 VFIPPGFDVTSDSSQR 328
           VFIPPGFDV++  +++
Sbjct: 284 VFIPPGFDVSTTPAKQ 299


>ref|XP_003524917.1| PREDICTED: uncharacterized protein LOC100811136 [Glycine max]
          Length = 253

 Score =  244 bits (623), Expect = 3e-62
 Identities = 118/195 (60%), Positives = 151/195 (77%)
 Frame = -3

Query: 912 RLAGVPVYALSNPSDEFXXXXXXXXXXXXXLFCFKEEDVNTLLDQMKLMDPTMRNGSKVV 733
           RL G+PVYALSN S+EF             LFCF ++D   LL+Q+ L+DP  R GSKVV
Sbjct: 59  RLEGIPVYALSNASEEFLLVSGSSSGKNLGLFCFNKDDAEALLNQVTLIDPHARQGSKVV 118

Query: 732 AVALNKVFQLKVDGVGFRLIPDSTQITNAIAERKRAGSSDGSFSGVPVFQSRSLILKSQK 553
            VALNKVFQLKV+GV FRLIP+ +Q+ NA+ ER+++G +   FSGVPVFQSRSLILKSQ 
Sbjct: 119 PVALNKVFQLKVNGVAFRLIPEFSQVKNALQEREKSGFASSGFSGVPVFQSRSLILKSQN 178

Query: 552 TRYRPVFFRKEDLENSLRKASSDQRKMNPALREGDIQVAVFEDIILGMKDNSSSEWDDVV 373
            R+RP+FFRKEDLEN+L+ A+ +Q K+NP +R+GDIQVA  ED+I  MK+NS+S WDDV+
Sbjct: 179 KRFRPLFFRKEDLENTLKSAAREQNKLNPTMRKGDIQVATLEDVIKEMKENSTSNWDDVI 238

Query: 372 FIPPGFDVTSDSSQR 328
           FIPPGFDV+ DS+++
Sbjct: 239 FIPPGFDVSDDSNEQ 253


>ref|XP_002883453.1| hypothetical protein ARALYDRAFT_479887 [Arabidopsis lyrata subsp.
           lyrata] gi|297329293|gb|EFH59712.1| hypothetical protein
           ARALYDRAFT_479887 [Arabidopsis lyrata subsp. lyrata]
          Length = 314

 Score =  243 bits (620), Expect = 7e-62
 Identities = 125/195 (64%), Positives = 151/195 (77%), Gaps = 1/195 (0%)
 Frame = -3

Query: 912 RLAGVPVYALSNPSDEFXXXXXXXXXXXXXLFCFKEEDVNTLLDQMKLMDPTMRN-GSKV 736
           RLAGVPVYALSN ++EF             L   KEED  TLL QMK MDP MR  GSKV
Sbjct: 119 RLAGVPVYALSNSNEEFVLVSGTSSGKSLGLLFCKEEDAETLLKQMKSMDPRMRKEGSKV 178

Query: 735 VAVALNKVFQLKVDGVGFRLIPDSTQITNAIAERKRAGSSDGSFSGVPVFQSRSLILKSQ 556
           VA+AL+KVFQLKV+GV FRLIP+STQ+ NA+ ERK AG  D  F GVPVFQS+SLIL+S+
Sbjct: 179 VALALSKVFQLKVNGVAFRLIPESTQVKNALKERKTAGIDDDDFHGVPVFQSKSLILRSE 238

Query: 555 KTRYRPVFFRKEDLENSLRKASSDQRKMNPALREGDIQVAVFEDIILGMKDNSSSEWDDV 376
              YRPVFFRKEDLE SL +ASS Q ++NPAL+ GDIQVAVFEDI+ GMK++++S WDD+
Sbjct: 239 NMSYRPVFFRKEDLEKSLIRASSQQNRLNPALKPGDIQVAVFEDIVKGMKESTTSNWDDI 298

Query: 375 VFIPPGFDVTSDSSQ 331
           VFIPPGF+V+++ +Q
Sbjct: 299 VFIPPGFEVSTEQTQ 313


Top