BLASTX nr result

ID: Cnidium21_contig00007168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007168
         (833 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002864707.1| hypothetical protein ARALYDRAFT_919322 [Arab...   213   3e-53
gb|AAG50930.1|AC079284_5 unknown protein [Arabidopsis thaliana]       211   1e-52
ref|NP_564580.1| Ankyrin repeat family protein [Arabidopsis thal...   211   1e-52
ref|XP_002319824.1| predicted protein [Populus trichocarpa] gi|2...   209   5e-52
gb|AFK46964.1| unknown [Lotus japonicus]                              207   2e-51

>ref|XP_002864707.1| hypothetical protein ARALYDRAFT_919322 [Arabidopsis lyrata subsp.
           lyrata] gi|297310542|gb|EFH40966.1| hypothetical protein
           ARALYDRAFT_919322 [Arabidopsis lyrata subsp. lyrata]
          Length = 177

 Score =  213 bits (543), Expect = 3e-53
 Identities = 109/163 (66%), Positives = 129/163 (79%)
 Frame = +2

Query: 65  SCSRSVSLKSKFVGTVDKRLGWLRLSKIGLLVXXXXXXXXXXXXXCWFKFGKNGVDAEQA 244
           SCS    L S+F+GT + +L  +R +++G                CWFKFGKNGVDAE A
Sbjct: 24  SCSSPTLLSSRFLGTRNLKLQ-IRPARLG--------PSNGSRTTCWFKFGKNGVDAENA 74

Query: 245 GIYGSQSRNDFDRDDVEQYFNYMGMLAVEGTYDKMEALLNQKIHPVDILLILAAAEGDKP 424
           GIYGSQSR+DFDRDDVEQYFNYMGMLAVEGTY KMEALL+  IHPVDILL+LAA EGD+P
Sbjct: 75  GIYGSQSRDDFDRDDVEQYFNYMGMLAVEGTYSKMEALLSLNIHPVDILLMLAATEGDRP 134

Query: 425 KIEELLRAGADYTVKDVDGRTALDRASSDEIKDLILGFSVPKA 553
           KIEELL+AGADY+VKD DGRTA+DRA+S+EI+DLILG++  KA
Sbjct: 135 KIEELLKAGADYSVKDADGRTAIDRANSEEIRDLILGYNAQKA 177


>gb|AAG50930.1|AC079284_5 unknown protein [Arabidopsis thaliana]
          Length = 257

 Score =  211 bits (538), Expect = 1e-52
 Identities = 108/156 (69%), Positives = 126/156 (80%)
 Frame = +2

Query: 86  LKSKFVGTVDKRLGWLRLSKIGLLVXXXXXXXXXXXXXCWFKFGKNGVDAEQAGIYGSQS 265
           L S+F+GT + +L  +R +++G                CWFKFGKNGVDAE AGIYGSQS
Sbjct: 111 LSSRFLGTRNLKLR-IRPARLG--------PSNGSRTTCWFKFGKNGVDAENAGIYGSQS 161

Query: 266 RNDFDRDDVEQYFNYMGMLAVEGTYDKMEALLNQKIHPVDILLILAAAEGDKPKIEELLR 445
           R+DFDRDDVEQYFNYMGMLAVEGTY KMEALLN  IHPVDILL+LAA EGD+PKIEELL+
Sbjct: 162 RDDFDRDDVEQYFNYMGMLAVEGTYSKMEALLNLNIHPVDILLMLAATEGDRPKIEELLK 221

Query: 446 AGADYTVKDVDGRTALDRASSDEIKDLILGFSVPKA 553
           AGADY+VKD DGRTA+DRA+S+EI+DLILG+S  KA
Sbjct: 222 AGADYSVKDADGRTAIDRANSEEIRDLILGYSTQKA 257


>ref|NP_564580.1| Ankyrin repeat family protein [Arabidopsis thaliana]
           gi|75248476|sp|Q8VY88.1|LTD_ARATH RecName: Full=Protein
           LHCP TRANSLOCATION DEFECT; AltName: Full=Protein
           GRANA-DEFICIENT CHLOROPLAST 1; Flags: Precursor
           gi|18252245|gb|AAL61955.1| unknown protein [Arabidopsis
           thaliana] gi|21386977|gb|AAM47892.1| unknown protein
           [Arabidopsis thaliana] gi|21553984|gb|AAM63065.1|
           unknown [Arabidopsis thaliana]
           gi|332194478|gb|AEE32599.1| Ankyrin repeat family
           protein [Arabidopsis thaliana]
          Length = 175

 Score =  211 bits (538), Expect = 1e-52
 Identities = 108/156 (69%), Positives = 126/156 (80%)
 Frame = +2

Query: 86  LKSKFVGTVDKRLGWLRLSKIGLLVXXXXXXXXXXXXXCWFKFGKNGVDAEQAGIYGSQS 265
           L S+F+GT + +L  +R +++G                CWFKFGKNGVDAE AGIYGSQS
Sbjct: 29  LSSRFLGTRNLKLR-IRPARLG--------PSNGSRTTCWFKFGKNGVDAENAGIYGSQS 79

Query: 266 RNDFDRDDVEQYFNYMGMLAVEGTYDKMEALLNQKIHPVDILLILAAAEGDKPKIEELLR 445
           R+DFDRDDVEQYFNYMGMLAVEGTY KMEALLN  IHPVDILL+LAA EGD+PKIEELL+
Sbjct: 80  RDDFDRDDVEQYFNYMGMLAVEGTYSKMEALLNLNIHPVDILLMLAATEGDRPKIEELLK 139

Query: 446 AGADYTVKDVDGRTALDRASSDEIKDLILGFSVPKA 553
           AGADY+VKD DGRTA+DRA+S+EI+DLILG+S  KA
Sbjct: 140 AGADYSVKDADGRTAIDRANSEEIRDLILGYSTQKA 175


>ref|XP_002319824.1| predicted protein [Populus trichocarpa] gi|222858200|gb|EEE95747.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score =  209 bits (533), Expect = 5e-52
 Identities = 110/156 (70%), Positives = 123/156 (78%)
 Frame = +2

Query: 86  LKSKFVGTVDKRLGWLRLSKIGLLVXXXXXXXXXXXXXCWFKFGKNGVDAEQAGIYGSQS 265
           L S+F+G +   +GWLR  +IG                CWFKFGKNGVDAE AGIYGSQ+
Sbjct: 26  LNSQFLG-LQSNVGWLRPCRIG--------PSNGSRAKCWFKFGKNGVDAEGAGIYGSQT 76

Query: 266 RNDFDRDDVEQYFNYMGMLAVEGTYDKMEALLNQKIHPVDILLILAAAEGDKPKIEELLR 445
           R+DFDRDDVEQYFNYMGMLAVEGTYDKMEALL+Q IHPVDILL+LAA+EGDKPKIEELLR
Sbjct: 77  RDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDILLMLAASEGDKPKIEELLR 136

Query: 446 AGADYTVKDVDGRTALDRASSDEIKDLILGFSVPKA 553
           AGA Y +KD DGRTALDRA ++E KD ILG SV KA
Sbjct: 137 AGAGYDIKDADGRTALDRA-NEETKDFILGLSVRKA 171


>gb|AFK46964.1| unknown [Lotus japonicus]
          Length = 175

 Score =  207 bits (528), Expect = 2e-51
 Identities = 113/160 (70%), Positives = 128/160 (80%), Gaps = 1/160 (0%)
 Frame = +2

Query: 77  SVSLKSKFVGTVDKRLGWLRL-SKIGLLVXXXXXXXXXXXXXCWFKFGKNGVDAEQAGIY 253
           S++L S F+G + +R+G LRL S IG                CWF+FGKNGVDAE AGIY
Sbjct: 26  SLNLASGFLG-IRRRVGCLRLTSSIG--------PSNGSKATCWFRFGKNGVDAEGAGIY 76

Query: 254 GSQSRNDFDRDDVEQYFNYMGMLAVEGTYDKMEALLNQKIHPVDILLILAAAEGDKPKIE 433
           GSQSR+DFDRDDVEQYFNYMGMLAVEGTYDKMEALL+QKIHPVDILL+LAA+EGD PKIE
Sbjct: 77  GSQSRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQKIHPVDILLLLAASEGDMPKIE 136

Query: 434 ELLRAGADYTVKDVDGRTALDRASSDEIKDLILGFSVPKA 553
           ELLRAGA Y V+D DGRTALDRA +DE+KD IL FSV +A
Sbjct: 137 ELLRAGAKYDVRDGDGRTALDRA-NDEVKDFILNFSVQRA 175


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