BLASTX nr result

ID: Cnidium21_contig00007113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007113
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24060.3| unnamed protein product [Vitis vinifera]               77   1e-12
ref|XP_002265949.1| PREDICTED: uncharacterized protein LOC100244...    77   1e-12
ref|XP_002309023.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_002331407.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_004172869.1| PREDICTED: uncharacterized LOC101216928 [Cuc...    57   1e-06

>emb|CBI24060.3| unnamed protein product [Vitis vinifera]
          Length = 303

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 50/117 (42%), Positives = 59/117 (50%), Gaps = 14/117 (11%)
 Frame = +3

Query: 3   SPRSNPIPIFGDSK---------PLGSNFEDDMELSEEYTCVISHIGNNLIKKSEYFDGN 155
           SPRSNPIPI   +K         P     E +ME+SE YTCVISH GNNLIKK  YFD  
Sbjct: 136 SPRSNPIPIANRAKHMPKVEKCRPSSGMMEMEMEMSESYTCVISHCGNNLIKKRVYFDDK 195

Query: 156 LTSKCE-----TTVSEKGGSYWVSSGVFSEASPPSKTNAGESAAVAVFGTSDFLSSC 311
                +       +S    +YWV+    SEA+PP             F T+DFLSSC
Sbjct: 196 PNGVVDDITTAVPISSTDAAYWVA----SEAAPP-------------FKTADFLSSC 235


>ref|XP_002265949.1| PREDICTED: uncharacterized protein LOC100244902 isoform 1 [Vitis
           vinifera]
          Length = 267

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 50/117 (42%), Positives = 59/117 (50%), Gaps = 14/117 (11%)
 Frame = +3

Query: 3   SPRSNPIPIFGDSK---------PLGSNFEDDMELSEEYTCVISHIGNNLIKKSEYFDGN 155
           SPRSNPIPI   +K         P     E +ME+SE YTCVISH GNNLIKK  YFD  
Sbjct: 100 SPRSNPIPIANRAKHMPKVEKCRPSSGMMEMEMEMSESYTCVISHCGNNLIKKRVYFDDK 159

Query: 156 LTSKCE-----TTVSEKGGSYWVSSGVFSEASPPSKTNAGESAAVAVFGTSDFLSSC 311
                +       +S    +YWV+    SEA+PP             F T+DFLSSC
Sbjct: 160 PNGVVDDITTAVPISSTDAAYWVA----SEAAPP-------------FKTADFLSSC 199


>ref|XP_002309023.1| predicted protein [Populus trichocarpa] gi|222854999|gb|EEE92546.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 45/123 (36%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
 Frame = +3

Query: 3   SPRSNPIPIFGDSKPLG---------SNFEDDM---------ELSEEYTCVISHIGNNLI 128
           SPRS+ +PI    KP           SN + D          E  E YTCVISH+GNN+I
Sbjct: 63  SPRSSLLPIVSLKKPASYFKEGGIGVSNLDKDSSGGGVFVVDENDESYTCVISHVGNNVI 122

Query: 129 KKSEYFDGNLTSKCETTVSEKGGSYWVSSGVFSEASPPSK--TNAGESAAVAVFGTSDFL 302
           K+S  +        +    + G  + V SG+   ASPP +   NA  +AA   F + DFL
Sbjct: 123 KQSVCYG-------DEVCIDPGNEFDVGSGLVYAASPPVRMPMNAAVAAARREFWSKDFL 175

Query: 303 SSC 311
           SSC
Sbjct: 176 SSC 178


>ref|XP_002331407.1| predicted protein [Populus trichocarpa] gi|222873621|gb|EEF10752.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 44/117 (37%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
 Frame = +3

Query: 3   SPRSNPIPIFGDSKPLGSNFEDDM-------------ELSEEYTCVISHIGNNLIKKSEY 143
           SPRS+P+P+    KP     E  +             E  E YTCVISH+GNN+IKKS Y
Sbjct: 57  SPRSSPVPVVSLKKPASCFKEGGIGVWNFDKGGVVVDENDESYTCVISHVGNNVIKKSVY 116

Query: 144 FDGNLTSKCETTVSEKGGSYWVSSGVFSEASPPSKTNAGESAAV-AVFGTSDFLSSC 311
           +D  +   C  +VS     + V SG+   ASP        + A    F + DFLSSC
Sbjct: 117 YDDKV---CVDSVS----WFDVGSGLLYAASPAVMMPIDVATAERREFWSKDFLSSC 166


>ref|XP_004172869.1| PREDICTED: uncharacterized LOC101216928 [Cucumis sativus]
          Length = 236

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 47/114 (41%), Positives = 54/114 (47%), Gaps = 11/114 (9%)
 Frame = +3

Query: 3   SPRSNPIPIFGDSKPL-----GSNFEDDM------ELSEEYTCVISHIGNNLIKKSEYFD 149
           SPRS  IPI   +KP      G N E +       ELSE YTCV SH GN L +K  YF+
Sbjct: 65  SPRSCSIPIVSSAKPAANFRGGFNLEKETLPEVVDELSESYTCVTSHFGNRLFEKRVYFN 124

Query: 150 GNLTSKCETTVSEKGGSYWVSSGVFSEASPPSKTNAGESAAVAVFGTSDFLSSC 311
           G      E  +     S  V SGVFS  SP S        A   F  ++FLSSC
Sbjct: 125 G------ELDLVNGRSSNIVRSGVFS-TSPMS-----FGVAERGFCAAEFLSSC 166


Top