BLASTX nr result

ID: Cnidium21_contig00007049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007049
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA73171.1| histone H1 [Apium graveolens]                          86   4e-15
ref|NP_180620.1| histone H1.2 [Arabidopsis thaliana] gi|121907|s...    68   1e-09
ref|NP_001189643.1| histone H1.2 [Arabidopsis thaliana] gi|33025...    68   1e-09
gb|ACU21235.1| unknown [Glycine max]                                   68   1e-09
gb|AAA50303.1| histone H1 [Pisum sativum]                              68   2e-09

>emb|CAA73171.1| histone H1 [Apium graveolens]
          Length = 302

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 42/45 (93%), Positives = 43/45 (95%)
 Frame = -2

Query: 137 HPSYLEMITDAITCLKERTGSSQQAIQKFLEAKHKDLPAVFRRML 3
           HP YLEMITDAIT LKERTGSSQQAIQKFLEAKHKDLPAVFR+ML
Sbjct: 61  HPPYLEMITDAITSLKERTGSSQQAIQKFLEAKHKDLPAVFRKML 105


>ref|NP_180620.1| histone H1.2 [Arabidopsis thaliana] gi|121907|sp|P26569.1|H12_ARATH
           RecName: Full=Histone H1.2
           gi|13430598|gb|AAK25921.1|AF360211_1 putative histone H1
           protein [Arabidopsis thaliana] gi|16320|emb|CAA44316.1|
           Histone H1-2 [Arabidopsis thaliana]
           gi|14532870|gb|AAK64117.1| putative histone H1 protein
           [Arabidopsis thaliana] gi|20198329|gb|AAM15525.1|
           histone H1 [Arabidopsis thaliana]
           gi|21553923|gb|AAM63006.1| histone H1 [Arabidopsis
           thaliana] gi|330253325|gb|AEC08419.1| histone H1.2
           [Arabidopsis thaliana]
          Length = 273

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 32/45 (71%), Positives = 36/45 (80%)
 Frame = -2

Query: 137 HPSYLEMITDAITCLKERTGSSQQAIQKFLEAKHKDLPAVFRRML 3
           HP+Y EMI DAI  LKERTGSSQ AIQKF+E KHK LP  FR++L
Sbjct: 62  HPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLL 106


>ref|NP_001189643.1| histone H1.2 [Arabidopsis thaliana] gi|330253326|gb|AEC08420.1|
           histone H1.2 [Arabidopsis thaliana]
          Length = 202

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 32/45 (71%), Positives = 36/45 (80%)
 Frame = -2

Query: 137 HPSYLEMITDAITCLKERTGSSQQAIQKFLEAKHKDLPAVFRRML 3
           HP+Y EMI DAI  LKERTGSSQ AIQKF+E KHK LP  FR++L
Sbjct: 62  HPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLL 106


>gb|ACU21235.1| unknown [Glycine max]
          Length = 164

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 33/45 (73%), Positives = 36/45 (80%)
 Frame = -2

Query: 137 HPSYLEMITDAITCLKERTGSSQQAIQKFLEAKHKDLPAVFRRML 3
           HPSY EMI DAIT LKERTGSSQ AI KF+E KHK LP  FR++L
Sbjct: 55  HPSYEEMIKDAITSLKERTGSSQHAIAKFIEEKHKQLPPNFRKLL 99


>gb|AAA50303.1| histone H1 [Pisum sativum]
          Length = 185

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 30/45 (66%), Positives = 38/45 (84%)
 Frame = -2

Query: 137 HPSYLEMITDAITCLKERTGSSQQAIQKFLEAKHKDLPAVFRRML 3
           HP++ EMIT+AIT LKERTGSSQ AI KF+E KHKDLP  +R+++
Sbjct: 21  HPTFAEMITEAITSLKERTGSSQYAITKFIEEKHKDLPPTYRKLV 65


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