BLASTX nr result

ID: Cnidium21_contig00006974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006974
         (1478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002883270.1| leucine-rich repeat family protein [Arabidop...   543   e-152
ref|NP_188718.1| leucine-rich repeat-containing protein [Arabido...   542   e-152
ref|NP_001240925.1| DNA-damage-repair/toleration protein DRT100-...   542   e-151
dbj|BAJ33628.1| unnamed protein product [Thellungiella halophila]     540   e-151
gb|ABD46739.1| leucine-rich repeat protein [Nicotiana tabacum]        540   e-151

>ref|XP_002883270.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297329110|gb|EFH59529.1| leucine-rich repeat family
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 365

 Score =  543 bits (1398), Expect = e-152
 Identities = 257/345 (74%), Positives = 297/345 (86%)
 Frame = +1

Query: 166  TCCPPSDREALLAFKTSLHEPYLGIFKSWTGNDCCHKWYGISCDSTNGRVADINLRGESE 345
            TCCPPSDR ALLAF+++LHEPYLGIF SWTG DCCH WYGISCDS   RVADINLRGESE
Sbjct: 18   TCCPPSDRRALLAFRSALHEPYLGIFNSWTGQDCCHNWYGISCDSLTHRVADINLRGESE 77

Query: 346  DPLFQKAHRTGYMTGTISPAICKLTWLSSIIIADWKGITGPIPDCVSYLPYLRMLDLIGN 525
            DP+F++AHRTGYMTG IS +IC LT LS+I IADWKGI+G IP C++ LP+LR LDLIGN
Sbjct: 78   DPIFERAHRTGYMTGHISASICDLTRLSAITIADWKGISGEIPKCITRLPFLRTLDLIGN 137

Query: 526  KLTGQLPKDIGRLKRLTVLNVADNNISGYIPRSISGLSSLMHLDLRNNQISGPLPRDIGK 705
            +++G +P DIGRL RL VLNVADN ISG IP+S++ LSSLMHLDLRNN ISG +P D+G+
Sbjct: 138  QISGGIPYDIGRLNRLAVLNVADNRISGSIPKSLTNLSSLMHLDLRNNLISGVIPSDVGR 197

Query: 706  LRMMSRALLSRNRITGPIPNSISYIYRLSDLDLSLNQISGAIPPSLGKMGVLATLNLDGN 885
            L+M+SRALLS NRITG IP S+S IYRL+D+DLS NQ+ G IPPSLG+M VLATLNLDGN
Sbjct: 198  LKMLSRALLSGNRITGRIPESLSNIYRLADVDLSGNQLYGTIPPSLGRMSVLATLNLDGN 257

Query: 886  KLSGTIPTTLINSGVSILNLSKNSLEGNIPDVFGPRSYFTAMDLSYNQLKGPIPKSISGA 1065
            K+SG IP TL+ S V  LNLS+N L+G IP+ FGPRSYFT +DLSYN LKGPIP+SISGA
Sbjct: 258  KISGEIPQTLMTSSVMNLNLSRNLLQGKIPEGFGPRSYFTVLDLSYNNLKGPIPRSISGA 317

Query: 1066 SYVGHLDLSHNHLCGPIPVGSPFDHLEASSFANNDCLCGKPLRSC 1200
            S++GHLDLSHNHLCG IPVGSPFDHLEA+SF  NDCLCGKPLR+C
Sbjct: 318  SFIGHLDLSHNHLCGRIPVGSPFDHLEAASFMFNDCLCGKPLRAC 362


>ref|NP_188718.1| leucine-rich repeat-containing protein [Arabidopsis thaliana]
            gi|9294409|dbj|BAB02490.1| polygalacturonase
            inhibitor-like protein [Arabidopsis thaliana]
            gi|17380932|gb|AAL36278.1| unknown protein [Arabidopsis
            thaliana] gi|21436417|gb|AAM51409.1| unknown protein
            [Arabidopsis thaliana] gi|332642907|gb|AEE76428.1|
            leucine-rich repeat-containing protein [Arabidopsis
            thaliana]
          Length = 365

 Score =  542 bits (1397), Expect = e-152
 Identities = 256/345 (74%), Positives = 298/345 (86%)
 Frame = +1

Query: 166  TCCPPSDREALLAFKTSLHEPYLGIFKSWTGNDCCHKWYGISCDSTNGRVADINLRGESE 345
            TCCPPSDR ALLAF+++LHEPYLGIF SWTG DCCH WYGISCDS   RVADINLRGESE
Sbjct: 18   TCCPPSDRRALLAFRSALHEPYLGIFNSWTGQDCCHNWYGISCDSLTHRVADINLRGESE 77

Query: 346  DPLFQKAHRTGYMTGTISPAICKLTWLSSIIIADWKGITGPIPDCVSYLPYLRMLDLIGN 525
            DP+F++AHRTGYMTG IS +IC+LT LS+I IADWKGI+G IP C++ LP+LR LDLIGN
Sbjct: 78   DPIFERAHRTGYMTGHISASICELTRLSAITIADWKGISGEIPKCITRLPFLRTLDLIGN 137

Query: 526  KLTGQLPKDIGRLKRLTVLNVADNNISGYIPRSISGLSSLMHLDLRNNQISGPLPRDIGK 705
            +++G +P DIGRL RL VLNVADN ISG IP+S++ LSSLMHLDLRNN ISG +P D+G+
Sbjct: 138  QISGGIPYDIGRLNRLAVLNVADNRISGSIPKSLTNLSSLMHLDLRNNLISGVIPSDVGR 197

Query: 706  LRMMSRALLSRNRITGPIPNSISYIYRLSDLDLSLNQISGAIPPSLGKMGVLATLNLDGN 885
            L+M+SRALLS NRITG IP S++ IYRL+D+DLS NQ+ G IPPSLG+M VLATLNLDGN
Sbjct: 198  LKMLSRALLSGNRITGRIPESLTNIYRLADVDLSGNQLYGTIPPSLGRMSVLATLNLDGN 257

Query: 886  KLSGTIPTTLINSGVSILNLSKNSLEGNIPDVFGPRSYFTAMDLSYNQLKGPIPKSISGA 1065
            K+SG IP TL+ S V  LNLS+N L+G IP+ FGPRSYFT +DLSYN LKGPIP+SISGA
Sbjct: 258  KISGEIPQTLMTSSVMNLNLSRNLLQGKIPEGFGPRSYFTVLDLSYNNLKGPIPRSISGA 317

Query: 1066 SYVGHLDLSHNHLCGPIPVGSPFDHLEASSFANNDCLCGKPLRSC 1200
            S++GHLDLSHNHLCG IPVGSPFDHLEA+SF  NDCLCGKPLR+C
Sbjct: 318  SFIGHLDLSHNHLCGRIPVGSPFDHLEAASFMFNDCLCGKPLRAC 362


>ref|NP_001240925.1| DNA-damage-repair/toleration protein DRT100-like precursor [Glycine
            max] gi|223452540|gb|ACM89597.1| leucine rich repeat
            protein [Glycine max]
          Length = 368

 Score =  542 bits (1396), Expect = e-151
 Identities = 260/346 (75%), Positives = 295/346 (85%)
 Frame = +1

Query: 163  VTCCPPSDREALLAFKTSLHEPYLGIFKSWTGNDCCHKWYGISCDSTNGRVADINLRGES 342
            V  CPPSDR ALLAFK +LHEPYLGIF SWTG DCCHKWYG+SCD    RVADINLRGES
Sbjct: 22   VRSCPPSDRAALLAFKAALHEPYLGIFNSWTGADCCHKWYGVSCDQETRRVADINLRGES 81

Query: 343  EDPLFQKAHRTGYMTGTISPAICKLTWLSSIIIADWKGITGPIPDCVSYLPYLRMLDLIG 522
            E+P+F++AHRTGYMTG ISPAICKL  LSSI IADWKGI+G IP C++ LP+LR++DLIG
Sbjct: 82   EEPIFERAHRTGYMTGYISPAICKLARLSSITIADWKGISGEIPRCITTLPFLRIVDLIG 141

Query: 523  NKLTGQLPKDIGRLKRLTVLNVADNNISGYIPRSISGLSSLMHLDLRNNQISGPLPRDIG 702
            N+L+G +P  IGRL RLTVLNVADN ISG IP S++ LSSLMHLDLRNN  SGP+PR+ G
Sbjct: 142  NRLSGSIPAGIGRLHRLTVLNVADNLISGTIPTSLANLSSLMHLDLRNNLFSGPIPRNFG 201

Query: 703  KLRMMSRALLSRNRITGPIPNSISYIYRLSDLDLSLNQISGAIPPSLGKMGVLATLNLDG 882
             L M+SRALLS NR++G IP+S+S IYRL+DLDLS NQISG IP SLGKM VL+TLNLD 
Sbjct: 202  SLSMLSRALLSGNRLSGAIPSSVSQIYRLADLDLSRNQISGPIPESLGKMAVLSTLNLDM 261

Query: 883  NKLSGTIPTTLINSGVSILNLSKNSLEGNIPDVFGPRSYFTAMDLSYNQLKGPIPKSISG 1062
            NKLSG IP +L +SG+S LNLS+N+LEGNIPD FG RSYFTA+DLSYN LKG IPKSIS 
Sbjct: 262  NKLSGPIPVSLFSSGISDLNLSRNALEGNIPDAFGVRSYFTALDLSYNNLKGAIPKSISS 321

Query: 1063 ASYVGHLDLSHNHLCGPIPVGSPFDHLEASSFANNDCLCGKPLRSC 1200
            ASY+GHLDLSHNHLCG IP+GSPFDHLEASSF  NDCLCGKPL+ C
Sbjct: 322  ASYIGHLDLSHNHLCGKIPLGSPFDHLEASSFVYNDCLCGKPLKPC 367


>dbj|BAJ33628.1| unnamed protein product [Thellungiella halophila]
          Length = 365

 Score =  540 bits (1392), Expect = e-151
 Identities = 255/345 (73%), Positives = 295/345 (85%)
 Frame = +1

Query: 166  TCCPPSDREALLAFKTSLHEPYLGIFKSWTGNDCCHKWYGISCDSTNGRVADINLRGESE 345
            TCCPPSDR ALLAF+++LHEPYLGIF SWTG DCCH WYG+SCDS   RVADINLRGESE
Sbjct: 18   TCCPPSDRRALLAFRSALHEPYLGIFNSWTGQDCCHNWYGVSCDSVTHRVADINLRGESE 77

Query: 346  DPLFQKAHRTGYMTGTISPAICKLTWLSSIIIADWKGITGPIPDCVSYLPYLRMLDLIGN 525
            DP+F++AHRTG+MTG ISPAIC L  LS+I IA WKGI+G IP C++ LP+LR LDLIGN
Sbjct: 78   DPIFERAHRTGFMTGRISPAICNLPRLSAITIAGWKGISGEIPKCITRLPFLRTLDLIGN 137

Query: 526  KLTGQLPKDIGRLKRLTVLNVADNNISGYIPRSISGLSSLMHLDLRNNQISGPLPRDIGK 705
            +++G +P DIGRL RL VLNVADN ISG IP+S++ LSSLMHLDLRNNQISG +P D G+
Sbjct: 138  QISGGIPNDIGRLHRLAVLNVADNRISGPIPKSLTNLSSLMHLDLRNNQISGVIPPDFGR 197

Query: 706  LRMMSRALLSRNRITGPIPNSISYIYRLSDLDLSLNQISGAIPPSLGKMGVLATLNLDGN 885
            L M+SRALLS NRITG IP S++ IYRL+D+DLS NQ+ G IPPSLG+M VLATLNLDGN
Sbjct: 198  LTMLSRALLSGNRITGRIPESLTRIYRLADVDLSGNQLYGTIPPSLGRMAVLATLNLDGN 257

Query: 886  KLSGTIPTTLINSGVSILNLSKNSLEGNIPDVFGPRSYFTAMDLSYNQLKGPIPKSISGA 1065
            K+SG IP TL+ S V  LNLS+N L+G IP+ FGPRSYFT +DLSYN LKGPIP+SISGA
Sbjct: 258  KISGEIPQTLMTSSVMNLNLSRNLLQGKIPEGFGPRSYFTVLDLSYNNLKGPIPRSISGA 317

Query: 1066 SYVGHLDLSHNHLCGPIPVGSPFDHLEASSFANNDCLCGKPLRSC 1200
            S++GHLDLSHNHLCG IPVGSPFDHLEA+SF  NDCLCGKPLR+C
Sbjct: 318  SFIGHLDLSHNHLCGRIPVGSPFDHLEAASFMYNDCLCGKPLRAC 362


>gb|ABD46739.1| leucine-rich repeat protein [Nicotiana tabacum]
          Length = 365

 Score =  540 bits (1392), Expect = e-151
 Identities = 260/346 (75%), Positives = 295/346 (85%)
 Frame = +1

Query: 163  VTCCPPSDREALLAFKTSLHEPYLGIFKSWTGNDCCHKWYGISCDSTNGRVADINLRGES 342
            V  CPPSDR ALLAF+ +L+E  LGIF +W G +CCH WYG+SCD    RVADINLRGES
Sbjct: 19   VHSCPPSDRAALLAFRAALNESSLGIFNTWQGYECCHGWYGVSCDQLTHRVADINLRGES 78

Query: 343  EDPLFQKAHRTGYMTGTISPAICKLTWLSSIIIADWKGITGPIPDCVSYLPYLRMLDLIG 522
            EDPLFQKAH+TGYMTGTISPAICKL  LSS+ IADWKGITGPIP CV+ LP+LR++DLIG
Sbjct: 79   EDPLFQKAHKTGYMTGTISPAICKLERLSSLTIADWKGITGPIPSCVTSLPFLRIIDLIG 138

Query: 523  NKLTGQLPKDIGRLKRLTVLNVADNNISGYIPRSISGLSSLMHLDLRNNQISGPLPRDIG 702
            NKLTG++P +IGRL RLTVLNVADN +SG IPRS++ LSSLMHLDLRNN+I G LP + G
Sbjct: 139  NKLTGEIPSEIGRLSRLTVLNVADNCLSGRIPRSLTNLSSLMHLDLRNNRIFGTLPTNFG 198

Query: 703  KLRMMSRALLSRNRITGPIPNSISYIYRLSDLDLSLNQISGAIPPSLGKMGVLATLNLDG 882
            KLRM+SRALLS NR+ G IP SISYIYRLSDLDLSLN++SG IPPSLGKM VLATLNLDG
Sbjct: 199  KLRMLSRALLSGNRLIGKIPYSISYIYRLSDLDLSLNKLSGTIPPSLGKMHVLATLNLDG 258

Query: 883  NKLSGTIPTTLINSGVSILNLSKNSLEGNIPDVFGPRSYFTAMDLSYNQLKGPIPKSISG 1062
            N +SGTIP TLINS ++ILNLSKNS+EG IPD F  RSYF  MDLSYN+L+G IPKSIS 
Sbjct: 259  NNISGTIPPTLINSRINILNLSKNSIEGYIPDSFDERSYFMVMDLSYNKLRGKIPKSISS 318

Query: 1063 ASYVGHLDLSHNHLCGPIPVGSPFDHLEASSFANNDCLCGKPLRSC 1200
            A+++GH D+SHNHLCG IP GSPFDHLEASSF  NDCLCGKPL+ C
Sbjct: 319  ATFIGHFDVSHNHLCGQIPAGSPFDHLEASSFTYNDCLCGKPLKPC 364


Top