BLASTX nr result

ID: Cnidium21_contig00006955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006955
         (960 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39438.3| unnamed protein product [Vitis vinifera]              414   e-113
ref|XP_002266620.1| PREDICTED: uncharacterized WD repeat-contain...   414   e-113
ref|XP_002321094.1| predicted protein [Populus trichocarpa] gi|2...   410   e-112
ref|XP_002302896.1| predicted protein [Populus trichocarpa] gi|2...   406   e-111
gb|AFX67015.1| WD-repeat protein, partial [Solanum tuberosum]         404   e-110

>emb|CBI39438.3| unnamed protein product [Vitis vinifera]
          Length = 528

 Score =  414 bits (1065), Expect = e-113
 Identities = 189/234 (80%), Positives = 213/234 (91%)
 Frame = +1

Query: 1   CKRLDKKGVSFCTRTTYEDNAITNAVEIYDSLSGGIHFMASNNDCGIREYDMEKFQLMNH 180
           CKRLDK+GVSFCTRTTY+DNAITNA+EIYDS  GGIHFMASNNDCG+REYDME FQL+NH
Sbjct: 295 CKRLDKEGVSFCTRTTYDDNAITNALEIYDSPRGGIHFMASNNDCGVREYDMESFQLLNH 354

Query: 181 FRFPWPVNHTSVSPDSKILAVVGDDLEALLVDSQNGKTISSVVGHLDYSFASAWHPDGHT 360
           FRFPWPVNHTS+SPD K++ VVGD L  LLVDS NGKT+SSVVGHLDYSFASAWHP+G+ 
Sbjct: 355 FRFPWPVNHTSISPDRKLITVVGDHLHGLLVDSHNGKTVSSVVGHLDYSFASAWHPNGNI 414

Query: 361 FATGNQDKTCRVWDLRNLSKPVAVLKGNMGAVRSVRFSSDGQFLVVAEPADFVHVYSARV 540
           FATGNQDKTCRVWD R +  P+AVLKGN+GAVRS+RFSSDGQF+VVAEPADFVHVY  + 
Sbjct: 415 FATGNQDKTCRVWDARKVGTPIAVLKGNLGAVRSIRFSSDGQFMVVAEPADFVHVYDTKA 474

Query: 541 DYKKRQEIDFFGEISGVSLSPDDESLFIGVWDRTYASLLQYNRINEYKYLDSYM 702
           DYK RQEIDFFGEISGVSLSPDDE+L+IG+WDRTYASLLQYN+ ++Y YLD Y+
Sbjct: 475 DYKMRQEIDFFGEISGVSLSPDDEALYIGIWDRTYASLLQYNKRHKYGYLDCYL 528


>ref|XP_002266620.1| PREDICTED: uncharacterized WD repeat-containing protein C2A9.03
           [Vitis vinifera]
          Length = 443

 Score =  414 bits (1065), Expect = e-113
 Identities = 189/234 (80%), Positives = 213/234 (91%)
 Frame = +1

Query: 1   CKRLDKKGVSFCTRTTYEDNAITNAVEIYDSLSGGIHFMASNNDCGIREYDMEKFQLMNH 180
           CKRLDK+GVSFCTRTTY+DNAITNA+EIYDS  GGIHFMASNNDCG+REYDME FQL+NH
Sbjct: 210 CKRLDKEGVSFCTRTTYDDNAITNALEIYDSPRGGIHFMASNNDCGVREYDMESFQLLNH 269

Query: 181 FRFPWPVNHTSVSPDSKILAVVGDDLEALLVDSQNGKTISSVVGHLDYSFASAWHPDGHT 360
           FRFPWPVNHTS+SPD K++ VVGD L  LLVDS NGKT+SSVVGHLDYSFASAWHP+G+ 
Sbjct: 270 FRFPWPVNHTSISPDRKLITVVGDHLHGLLVDSHNGKTVSSVVGHLDYSFASAWHPNGNI 329

Query: 361 FATGNQDKTCRVWDLRNLSKPVAVLKGNMGAVRSVRFSSDGQFLVVAEPADFVHVYSARV 540
           FATGNQDKTCRVWD R +  P+AVLKGN+GAVRS+RFSSDGQF+VVAEPADFVHVY  + 
Sbjct: 330 FATGNQDKTCRVWDARKVGTPIAVLKGNLGAVRSIRFSSDGQFMVVAEPADFVHVYDTKA 389

Query: 541 DYKKRQEIDFFGEISGVSLSPDDESLFIGVWDRTYASLLQYNRINEYKYLDSYM 702
           DYK RQEIDFFGEISGVSLSPDDE+L+IG+WDRTYASLLQYN+ ++Y YLD Y+
Sbjct: 390 DYKMRQEIDFFGEISGVSLSPDDEALYIGIWDRTYASLLQYNKRHKYGYLDCYL 443


>ref|XP_002321094.1| predicted protein [Populus trichocarpa] gi|222861867|gb|EEE99409.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score =  410 bits (1053), Expect = e-112
 Identities = 186/234 (79%), Positives = 214/234 (91%)
 Frame = +1

Query: 1   CKRLDKKGVSFCTRTTYEDNAITNAVEIYDSLSGGIHFMASNNDCGIREYDMEKFQLMNH 180
           CKRLDK+GVSFCTRTTY+DNAITNA+EIYD + GGI FMASNNDCG+REYD+E FQL+NH
Sbjct: 164 CKRLDKQGVSFCTRTTYDDNAITNAIEIYDGMRGGIKFMASNNDCGLREYDLETFQLLNH 223

Query: 181 FRFPWPVNHTSVSPDSKILAVVGDDLEALLVDSQNGKTISSVVGHLDYSFASAWHPDGHT 360
           FRFPWPVNHTS+SPDS+++ VVGD+L+ LLVDSQ+GKT+S+V GH DYSFASAWHPDG  
Sbjct: 224 FRFPWPVNHTSMSPDSRLMTVVGDNLDGLLVDSQSGKTVSTVEGHSDYSFASAWHPDGRV 283

Query: 361 FATGNQDKTCRVWDLRNLSKPVAVLKGNMGAVRSVRFSSDGQFLVVAEPADFVHVYSARV 540
           FATGNQDKTCRVWD+R LS P  +LKGN+GAVRS+RFSSDGQF+ VAEPADFVHVYS R 
Sbjct: 284 FATGNQDKTCRVWDIRKLSSPTVILKGNLGAVRSIRFSSDGQFMFVAEPADFVHVYSTRD 343

Query: 541 DYKKRQEIDFFGEISGVSLSPDDESLFIGVWDRTYASLLQYNRINEYKYLDSYM 702
           DY+KRQEIDFFGEISGV+LSPDDESL IG+WDRTYASLLQYN+ ++Y YLDSY+
Sbjct: 344 DYRKRQEIDFFGEISGVALSPDDESLSIGIWDRTYASLLQYNKRHKYGYLDSYL 397


>ref|XP_002302896.1| predicted protein [Populus trichocarpa] gi|222844622|gb|EEE82169.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score =  406 bits (1044), Expect = e-111
 Identities = 185/234 (79%), Positives = 216/234 (92%)
 Frame = +1

Query: 1   CKRLDKKGVSFCTRTTYEDNAITNAVEIYDSLSGGIHFMASNNDCGIREYDMEKFQLMNH 180
           CKRLDK+GVSFCTRTTY+DNAITNA+EIYDS+ GGI FM+SNND G+REYD+E FQL+NH
Sbjct: 168 CKRLDKQGVSFCTRTTYDDNAITNAIEIYDSMRGGIRFMSSNNDGGLREYDLETFQLLNH 227

Query: 181 FRFPWPVNHTSVSPDSKILAVVGDDLEALLVDSQNGKTISSVVGHLDYSFASAWHPDGHT 360
           FRFPWPVNHTSVSPD +++AVVGD+L+ LLVDSQ+GKT+S+V GHLDYSFASAWHPDG+ 
Sbjct: 228 FRFPWPVNHTSVSPDRRLIAVVGDNLDGLLVDSQSGKTVSTVEGHLDYSFASAWHPDGNV 287

Query: 361 FATGNQDKTCRVWDLRNLSKPVAVLKGNMGAVRSVRFSSDGQFLVVAEPADFVHVYSARV 540
           FATGNQDKTCRVWD+R LS P A+LKGN+GAVRS+ FSSDGQF+ VAEPADFVHVYS + 
Sbjct: 288 FATGNQDKTCRVWDIRKLSSPTAILKGNLGAVRSICFSSDGQFMYVAEPADFVHVYSTQD 347

Query: 541 DYKKRQEIDFFGEISGVSLSPDDESLFIGVWDRTYASLLQYNRINEYKYLDSYM 702
           DY++RQEIDFFGEISGV+LSPDDESL+IG+WDRTYASLLQYN+ + Y YLDSY+
Sbjct: 348 DYRRRQEIDFFGEISGVALSPDDESLYIGIWDRTYASLLQYNKRHTYGYLDSYL 401


>gb|AFX67015.1| WD-repeat protein, partial [Solanum tuberosum]
          Length = 312

 Score =  404 bits (1039), Expect = e-110
 Identities = 185/234 (79%), Positives = 210/234 (89%)
 Frame = +1

Query: 1   CKRLDKKGVSFCTRTTYEDNAITNAVEIYDSLSGGIHFMASNNDCGIREYDMEKFQLMNH 180
           CK LDK GVSFC RTTYEDNAITNAVEIY+S+S G+ FMA+NNDCG+R YDMEKFQ MNH
Sbjct: 79  CKSLDKPGVSFCARTTYEDNAITNAVEIYESVSCGLRFMAANNDCGVRVYDMEKFQQMNH 138

Query: 181 FRFPWPVNHTSVSPDSKILAVVGDDLEALLVDSQNGKTISSVVGHLDYSFASAWHPDGHT 360
           FRFPWPVNHTS+SPD K+  VVGDDL+ LLVDS+NGKT++S+VGHLDYSFA AWHPDG T
Sbjct: 139 FRFPWPVNHTSMSPDCKLFTVVGDDLDGLLVDSRNGKTVASIVGHLDYSFACAWHPDGRT 198

Query: 361 FATGNQDKTCRVWDLRNLSKPVAVLKGNMGAVRSVRFSSDGQFLVVAEPADFVHVYSARV 540
           FATGNQDKTCR+WDLRNLS   A+LKGN+GA RS+RFSSDGQFLVVAEPADFVH+YS + 
Sbjct: 199 FATGNQDKTCRIWDLRNLSSSTAILKGNIGAARSIRFSSDGQFLVVAEPADFVHIYSTKS 258

Query: 541 DYKKRQEIDFFGEISGVSLSPDDESLFIGVWDRTYASLLQYNRINEYKYLDSYM 702
           DYKKRQEID FGEISGVSLSPDDESL+IG+WDRTY SLL+YNR +  +YLDS++
Sbjct: 259 DYKKRQEIDLFGEISGVSLSPDDESLYIGIWDRTYGSLLEYNRKHTCRYLDSFV 312


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