BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006951
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [...   215   3e-54
ref|XP_003549365.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   210   1e-52
ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   204   5e-51
ref|XP_004138653.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   204   5e-51
ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   201   5e-50

>ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223533842|gb|EEF35573.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 468

 Score =  215 bits (547), Expect = 3e-54
 Identities = 104/124 (83%), Positives = 114/124 (91%)
 Frame = -1

Query: 372 RISKRFNAIPTGTLYPNADEIEYLQRLVKYKDSAIIVLNKPPRLPVKGNLPVHNSMDALA 193
           RISKRF+ IP+GTLYPNADEI+YLQRLVKYKDSAIIVLNKPPRLPVKGNLP+HNSMDALA
Sbjct: 145 RISKRFDTIPSGTLYPNADEIQYLQRLVKYKDSAIIVLNKPPRLPVKGNLPLHNSMDALA 204

Query: 192 SAALSYDNEEGPKLVHRLDRESSGIHLMGRTKESISHLQWLFSGIYRANSSHKAWNDACH 13
           +AALSYD +EGPKLV RLDRESSG+ LMGRTKESI HLQWLFS + ++NS  KAWNDAC 
Sbjct: 205 AAALSYDYDEGPKLVQRLDRESSGLLLMGRTKESIDHLQWLFSDVNKSNSRCKAWNDACK 264

Query: 12  ATYQ 1
           ATYQ
Sbjct: 265 ATYQ 268


>ref|XP_003549365.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Glycine
           max]
          Length = 554

 Score =  210 bits (534), Expect = 1e-52
 Identities = 102/124 (82%), Positives = 114/124 (91%)
 Frame = -1

Query: 372 RISKRFNAIPTGTLYPNADEIEYLQRLVKYKDSAIIVLNKPPRLPVKGNLPVHNSMDALA 193
           RISKR++AIP+GTLYPNADEI+YLQRLV YKDSAIIVLNKPP+LPVKG+LPVHNSMDALA
Sbjct: 231 RISKRYDAIPSGTLYPNADEIKYLQRLVIYKDSAIIVLNKPPKLPVKGSLPVHNSMDALA 290

Query: 192 SAALSYDNEEGPKLVHRLDRESSGIHLMGRTKESISHLQWLFSGIYRANSSHKAWNDACH 13
           +AALSYD +EGPKLVHRLDRESSGI L+GRTK+S+SHLQWLFS I  A SS K WN+AC 
Sbjct: 291 AAALSYDYDEGPKLVHRLDRESSGILLLGRTKDSVSHLQWLFSNINNAKSSCKDWNEACE 350

Query: 12  ATYQ 1
           ATYQ
Sbjct: 351 ATYQ 354


>ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
           sativus]
          Length = 471

 Score =  204 bits (520), Expect = 5e-51
 Identities = 97/124 (78%), Positives = 111/124 (89%)
 Frame = -1

Query: 372 RISKRFNAIPTGTLYPNADEIEYLQRLVKYKDSAIIVLNKPPRLPVKGNLPVHNSMDALA 193
           ++++RF+ IP+GTLYPNADEI+YLQRLVKYKDSAIIVLNKPP+LPVKG LPVHNSMDALA
Sbjct: 149 KVARRFDTIPSGTLYPNADEIKYLQRLVKYKDSAIIVLNKPPKLPVKGTLPVHNSMDALA 208

Query: 192 SAALSYDNEEGPKLVHRLDRESSGIHLMGRTKESISHLQWLFSGIYRANSSHKAWNDACH 13
            AALSYD ++GPKLVHRLDRESSGI LMGRTKES+ HLQWLFS I  A  + KAW +AC+
Sbjct: 209 DAALSYDYDDGPKLVHRLDRESSGILLMGRTKESVDHLQWLFSNIRNAKFTCKAWEEACN 268

Query: 12  ATYQ 1
           ATYQ
Sbjct: 269 ATYQ 272


>ref|XP_004138653.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
           sativus]
          Length = 471

 Score =  204 bits (520), Expect = 5e-51
 Identities = 97/124 (78%), Positives = 111/124 (89%)
 Frame = -1

Query: 372 RISKRFNAIPTGTLYPNADEIEYLQRLVKYKDSAIIVLNKPPRLPVKGNLPVHNSMDALA 193
           ++++RF+ IP+GTLYPNADEI+YLQRLVKYKDSAIIVLNKPP+LPVKG LPVHNSMDALA
Sbjct: 149 KVARRFDTIPSGTLYPNADEIKYLQRLVKYKDSAIIVLNKPPKLPVKGTLPVHNSMDALA 208

Query: 192 SAALSYDNEEGPKLVHRLDRESSGIHLMGRTKESISHLQWLFSGIYRANSSHKAWNDACH 13
            AALSYD ++GPKLVHRLDRESSGI LMGRTKES+ HLQWLFS I  A  + KAW +AC+
Sbjct: 209 DAALSYDYDDGPKLVHRLDRESSGILLMGRTKESVDHLQWLFSNIRNAKFTCKAWEEACN 268

Query: 12  ATYQ 1
           ATYQ
Sbjct: 269 ATYQ 272


>ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Vitis
           vinifera]
          Length = 479

 Score =  201 bits (511), Expect = 5e-50
 Identities = 96/124 (77%), Positives = 111/124 (89%)
 Frame = -1

Query: 372 RISKRFNAIPTGTLYPNADEIEYLQRLVKYKDSAIIVLNKPPRLPVKGNLPVHNSMDALA 193
           RISKRF+ IP+GTL+PNADEIEYLQRLV YKD AI+VLNKPP++P+KGNLPVHNSMDALA
Sbjct: 154 RISKRFDTIPSGTLHPNADEIEYLQRLVTYKDPAILVLNKPPKVPLKGNLPVHNSMDALA 213

Query: 192 SAALSYDNEEGPKLVHRLDRESSGIHLMGRTKESISHLQWLFSGIYRANSSHKAWNDACH 13
           +AAL++D EEGPKLVHRLDRESSG+ LMGRTKES++HL WLFS I +A S  KAW+DAC 
Sbjct: 214 AAALTFDYEEGPKLVHRLDRESSGLLLMGRTKESVAHLHWLFSDINKAKSLSKAWDDACE 273

Query: 12  ATYQ 1
           AT Q
Sbjct: 274 ATCQ 277