BLASTX nr result

ID: Cnidium21_contig00006917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006917
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532972.1| RNA-binding protein, putative [Ricinus commu...   204   8e-51
ref|XP_002278861.2| PREDICTED: uncharacterized protein LOC100250...   201   1e-49
emb|CBI33920.3| unnamed protein product [Vitis vinifera]              201   1e-49
emb|CAN76782.1| hypothetical protein VITISV_013474 [Vitis vinifera]   201   1e-49
ref|XP_002305898.1| predicted protein [Populus trichocarpa] gi|2...   191   7e-47

>ref|XP_002532972.1| RNA-binding protein, putative [Ricinus communis]
            gi|223527250|gb|EEF29409.1| RNA-binding protein, putative
            [Ricinus communis]
          Length = 962

 Score =  204 bits (520), Expect = 8e-51
 Identities = 103/123 (83%), Positives = 110/123 (89%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2    DRDPAFKRGVTDSMPFPPGVGG-RGVADGNYNVQSYEVITAEKAIDESNVGNRMLRNMGW 178
            +RD  FK+G  DSMPFPPGVGG RG  D + N QSYEVITA+KAIDESNVGNRMLR+MGW
Sbjct: 837  NRDLPFKKGSLDSMPFPPGVGGGRGAGDASINTQSYEVITADKAIDESNVGNRMLRSMGW 896

Query: 179  QEGLGLGKDGSGMIEPVQAQSVEKRAGLGSQPKKLDPSLEVQAGDSYRTLIQKKALARFR 358
             EGLGLGKDGSGMIEPVQAQ+ EKRAGLGSQ KKLDPSLEVQAGDSY+TLIQKKALARFR
Sbjct: 897  HEGLGLGKDGSGMIEPVQAQATEKRAGLGSQQKKLDPSLEVQAGDSYKTLIQKKALARFR 956

Query: 359  EMS 367
            EMS
Sbjct: 957  EMS 959


>ref|XP_002278861.2| PREDICTED: uncharacterized protein LOC100250662 [Vitis vinifera]
          Length = 1105

 Score =  201 bits (510), Expect = 1e-49
 Identities = 100/122 (81%), Positives = 109/122 (89%), Gaps = 1/122 (0%)
 Frame = +2

Query: 5    RDPAFKRGVTDSMPFPPGVGG-RGVADGNYNVQSYEVITAEKAIDESNVGNRMLRNMGWQ 181
            RD AFK+G  DSMPFPPGVGG RG+ D N NVQSYEVITA+KAIDESNVGNRMLR+MGWQ
Sbjct: 984  RDSAFKKGSLDSMPFPPGVGGGRGMGDANGNVQSYEVITADKAIDESNVGNRMLRSMGWQ 1043

Query: 182  EGLGLGKDGSGMIEPVQAQSVEKRAGLGSQPKKLDPSLEVQAGDSYRTLIQKKALARFRE 361
            EG GLGKDGSGM+EPVQAQ+++ RAGLGS  KKLDP LEVQ GDSYRTLIQKKALARF+E
Sbjct: 1044 EGSGLGKDGSGMVEPVQAQAMDSRAGLGSHQKKLDPGLEVQPGDSYRTLIQKKALARFQE 1103

Query: 362  MS 367
            MS
Sbjct: 1104 MS 1105


>emb|CBI33920.3| unnamed protein product [Vitis vinifera]
          Length = 1029

 Score =  201 bits (510), Expect = 1e-49
 Identities = 100/122 (81%), Positives = 109/122 (89%), Gaps = 1/122 (0%)
 Frame = +2

Query: 5    RDPAFKRGVTDSMPFPPGVGG-RGVADGNYNVQSYEVITAEKAIDESNVGNRMLRNMGWQ 181
            RD AFK+G  DSMPFPPGVGG RG+ D N NVQSYEVITA+KAIDESNVGNRMLR+MGWQ
Sbjct: 908  RDSAFKKGSLDSMPFPPGVGGGRGMGDANGNVQSYEVITADKAIDESNVGNRMLRSMGWQ 967

Query: 182  EGLGLGKDGSGMIEPVQAQSVEKRAGLGSQPKKLDPSLEVQAGDSYRTLIQKKALARFRE 361
            EG GLGKDGSGM+EPVQAQ+++ RAGLGS  KKLDP LEVQ GDSYRTLIQKKALARF+E
Sbjct: 968  EGSGLGKDGSGMVEPVQAQAMDSRAGLGSHQKKLDPGLEVQPGDSYRTLIQKKALARFQE 1027

Query: 362  MS 367
            MS
Sbjct: 1028 MS 1029


>emb|CAN76782.1| hypothetical protein VITISV_013474 [Vitis vinifera]
          Length = 1070

 Score =  201 bits (510), Expect = 1e-49
 Identities = 100/122 (81%), Positives = 109/122 (89%), Gaps = 1/122 (0%)
 Frame = +2

Query: 5    RDPAFKRGVTDSMPFPPGVGG-RGVADGNYNVQSYEVITAEKAIDESNVGNRMLRNMGWQ 181
            RD AFK+G  DSMPFPPGVGG RG+ D N NVQSYEVITA+KAIDESNVGNRMLR+MGWQ
Sbjct: 949  RDSAFKKGSLDSMPFPPGVGGGRGMGDANGNVQSYEVITADKAIDESNVGNRMLRSMGWQ 1008

Query: 182  EGLGLGKDGSGMIEPVQAQSVEKRAGLGSQPKKLDPSLEVQAGDSYRTLIQKKALARFRE 361
            EG GLGKDGSGM+EPVQAQ+++ RAGLGS  KKLDP LEVQ GDSYRTLIQKKALARF+E
Sbjct: 1009 EGSGLGKDGSGMVEPVQAQAMDSRAGLGSHQKKLDPGLEVQPGDSYRTLIQKKALARFQE 1068

Query: 362  MS 367
            MS
Sbjct: 1069 MS 1070


>ref|XP_002305898.1| predicted protein [Populus trichocarpa] gi|222848862|gb|EEE86409.1|
            predicted protein [Populus trichocarpa]
          Length = 1023

 Score =  191 bits (486), Expect = 7e-47
 Identities = 96/122 (78%), Positives = 106/122 (86%), Gaps = 1/122 (0%)
 Frame = +2

Query: 5    RDPAFKRGVTDSMPFPPGVGG-RGVADGNYNVQSYEVITAEKAIDESNVGNRMLRNMGWQ 181
            R+ AFKR   DSMPFPPGVGG RG+ D     QSYEVIT +KA+ ESNVGNRMLRNMGWQ
Sbjct: 906  RESAFKRSALDSMPFPPGVGGGRGIGDA----QSYEVITVDKALGESNVGNRMLRNMGWQ 961

Query: 182  EGLGLGKDGSGMIEPVQAQSVEKRAGLGSQPKKLDPSLEVQAGDSYRTLIQKKALARFRE 361
            EG GLGKDG GM+EPVQAQ++++RAGLGSQ KKLDPSLEVQAGDSY+TLIQKKALARFRE
Sbjct: 962  EGSGLGKDGGGMVEPVQAQAIDRRAGLGSQQKKLDPSLEVQAGDSYKTLIQKKALARFRE 1021

Query: 362  MS 367
            MS
Sbjct: 1022 MS 1023


Top