BLASTX nr result

ID: Cnidium21_contig00006891 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006891
         (832 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520021.1| NADH-ubiquinone oxidoreductase subunit B17.2...   280   3e-73
ref|NP_566192.1| putative NADH dehydrogenase [ubiquinone] 1 alph...   278   1e-72
ref|XP_002884359.1| NADH:ubiquinone oxidoreductase family protei...   276   3e-72
ref|NP_001030628.1| putative NADH dehydrogenase [ubiquinone] 1 a...   276   5e-72
ref|NP_001235085.1| uncharacterized protein LOC100500489 [Glycin...   266   4e-69

>ref|XP_002520021.1| NADH-ubiquinone oxidoreductase subunit B17.2, putative [Ricinus
           communis] gi|223540785|gb|EEF42345.1| NADH-ubiquinone
           oxidoreductase subunit B17.2, putative [Ricinus
           communis]
          Length = 159

 Score =  280 bits (716), Expect = 3e-73
 Identities = 125/158 (79%), Positives = 141/158 (89%)
 Frame = +1

Query: 118 MATTLVKSVFNSIREKGLLTFVRDIKHEGYLKCLADGNLLQTKLHNIGATVVGVDKFGNK 297
           MA T+VK    SIREKGL TF+R++K EGYL+CLADGNLLQTK+HNIGAT+VGVDKFGNK
Sbjct: 1   MALTVVKGALKSIREKGLGTFLRELKEEGYLRCLADGNLLQTKIHNIGATLVGVDKFGNK 60

Query: 298 YYEKLGDTQYGRHRWVEYASKGRYNASQVPPEWHGWLHFITDRTGDELLNLKPKRYGLDH 477
           YYE+L D Q+GRHRWVEYA K RYNASQVPPEWHGWLHFITD TGDELL LKPKRYG +H
Sbjct: 61  YYERLQDMQFGRHRWVEYAEKSRYNASQVPPEWHGWLHFITDHTGDELLMLKPKRYGAEH 120

Query: 478 QENLSGEGDKYIYHSKGHTLHAGQRDWTRYQSWQPTKT 591
           +ENLSGEG+++IYHSKGH L+ GQ+DWTRYQ WQPTKT
Sbjct: 121 KENLSGEGEEFIYHSKGHALNPGQKDWTRYQLWQPTKT 158


>ref|NP_566192.1| putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
           12 [Arabidopsis thaliana]
           gi|12644540|sp|Q9M9M9.1|NDUAC_ARATH RecName:
           Full=Probable NADH dehydrogenase [ubiquinone] 1 alpha
           subcomplex subunit 12
           gi|6714426|gb|AAF26114.1|AC012328_17 unknown protein
           [Arabidopsis thaliana]
           gi|13878173|gb|AAK44164.1|AF370349_1 unknown protein
           [Arabidopsis thaliana] gi|17104529|gb|AAL34153.1|
           unknown protein [Arabidopsis thaliana]
           gi|21593289|gb|AAM65238.1| probable NADH-ubiquinone
           oxidoreductase subunit B17.2 (Complex I-B17.2)
           (CI-B17.2) [Arabidopsis thaliana]
           gi|332640380|gb|AEE73901.1| putative NADH dehydrogenase
           [ubiquinone] 1 alpha subcomplex subunit 12 [Arabidopsis
           thaliana]
          Length = 159

 Score =  278 bits (711), Expect = 1e-72
 Identities = 125/158 (79%), Positives = 141/158 (89%)
 Frame = +1

Query: 118 MATTLVKSVFNSIREKGLLTFVRDIKHEGYLKCLADGNLLQTKLHNIGATVVGVDKFGNK 297
           MA T+ KS   +IREKGL  F+R I+ EG+++CL DGNLLQTK+HNIGAT+VGVDKFGNK
Sbjct: 1   MALTVAKSALEAIREKGLGGFMRMIREEGFMRCLPDGNLLQTKIHNIGATLVGVDKFGNK 60

Query: 298 YYEKLGDTQYGRHRWVEYASKGRYNASQVPPEWHGWLHFITDRTGDELLNLKPKRYGLDH 477
           YY+KLGDTQYGRHRWVEYASK RYNASQVP EWHGWLHFITD TGDELL+LKPKRYGL+H
Sbjct: 61  YYQKLGDTQYGRHRWVEYASKDRYNASQVPAEWHGWLHFITDHTGDELLSLKPKRYGLEH 120

Query: 478 QENLSGEGDKYIYHSKGHTLHAGQRDWTRYQSWQPTKT 591
           +EN SGEGD YIYHSKGHTL+ GQ++WTRYQSW PTKT
Sbjct: 121 KENFSGEGDAYIYHSKGHTLNPGQKNWTRYQSWVPTKT 158


>ref|XP_002884359.1| NADH:ubiquinone oxidoreductase family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330199|gb|EFH60618.1|
           NADH:ubiquinone oxidoreductase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 159

 Score =  276 bits (707), Expect = 3e-72
 Identities = 125/158 (79%), Positives = 140/158 (88%)
 Frame = +1

Query: 118 MATTLVKSVFNSIREKGLLTFVRDIKHEGYLKCLADGNLLQTKLHNIGATVVGVDKFGNK 297
           MA T+ KS   +IREKGL   +R I+ EG+L+CL DGNLLQTK+HNIGAT+VGVDKFGNK
Sbjct: 1   MALTVAKSALEAIREKGLGGLMRMIREEGFLRCLPDGNLLQTKIHNIGATLVGVDKFGNK 60

Query: 298 YYEKLGDTQYGRHRWVEYASKGRYNASQVPPEWHGWLHFITDRTGDELLNLKPKRYGLDH 477
           YY+KLGDTQYGRHRWVEYASK RYNASQVP EWHGWLHFITD TGDELL+LKPKRYGL+H
Sbjct: 61  YYQKLGDTQYGRHRWVEYASKDRYNASQVPAEWHGWLHFITDHTGDELLSLKPKRYGLEH 120

Query: 478 QENLSGEGDKYIYHSKGHTLHAGQRDWTRYQSWQPTKT 591
           +EN SGEGD YIYHSKGHTL+ GQ++WTRYQSW PTKT
Sbjct: 121 KENFSGEGDAYIYHSKGHTLNPGQKNWTRYQSWVPTKT 158


>ref|NP_001030628.1| putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
           12 [Arabidopsis thaliana] gi|332640381|gb|AEE73902.1|
           putative NADH dehydrogenase [ubiquinone] 1 alpha
           subcomplex subunit 12 [Arabidopsis thaliana]
          Length = 159

 Score =  276 bits (705), Expect = 5e-72
 Identities = 124/158 (78%), Positives = 140/158 (88%)
 Frame = +1

Query: 118 MATTLVKSVFNSIREKGLLTFVRDIKHEGYLKCLADGNLLQTKLHNIGATVVGVDKFGNK 297
           MA T+ KS   +IREKGL  F+R I+ EG+++CL DGNLLQTK+HNIGAT+VGVDKFGNK
Sbjct: 1   MALTVAKSALEAIREKGLGGFMRMIREEGFMRCLPDGNLLQTKIHNIGATLVGVDKFGNK 60

Query: 298 YYEKLGDTQYGRHRWVEYASKGRYNASQVPPEWHGWLHFITDRTGDELLNLKPKRYGLDH 477
           YY+KLGDTQYG HRWVEYASK RYNASQVP EWHGWLHFITD TGDELL+LKPKRYGL+H
Sbjct: 61  YYQKLGDTQYGMHRWVEYASKDRYNASQVPAEWHGWLHFITDHTGDELLSLKPKRYGLEH 120

Query: 478 QENLSGEGDKYIYHSKGHTLHAGQRDWTRYQSWQPTKT 591
           +EN SGEGD YIYHSKGHTL+ GQ++WTRYQSW PTKT
Sbjct: 121 KENFSGEGDAYIYHSKGHTLNPGQKNWTRYQSWVPTKT 158


>ref|NP_001235085.1| uncharacterized protein LOC100500489 [Glycine max]
           gi|255630462|gb|ACU15589.1| unknown [Glycine max]
          Length = 158

 Score =  266 bits (680), Expect = 4e-69
 Identities = 117/151 (77%), Positives = 136/151 (90%)
 Frame = +1

Query: 127 TLVKSVFNSIREKGLLTFVRDIKHEGYLKCLADGNLLQTKLHNIGATVVGVDKFGNKYYE 306
           ++VK+V  S+REKG   F+R++K EGYL+CL DGNLLQTK+HNIGAT+VGVDKFGNKYYE
Sbjct: 3   SVVKNVLKSVREKGFGAFLRELKDEGYLRCLPDGNLLQTKIHNIGATLVGVDKFGNKYYE 62

Query: 307 KLGDTQYGRHRWVEYASKGRYNASQVPPEWHGWLHFITDRTGDELLNLKPKRYGLDHQEN 486
           KLGDTQ+GRHRWVEYA K RYNASQVP EWHGWLHFITD TGDELL LKPKRYG++H+EN
Sbjct: 63  KLGDTQFGRHRWVEYAEKTRYNASQVPAEWHGWLHFITDHTGDELLLLKPKRYGIEHKEN 122

Query: 487 LSGEGDKYIYHSKGHTLHAGQRDWTRYQSWQ 579
           LSGEG++YIYHSKGH L+ GQR+WTRYQ W+
Sbjct: 123 LSGEGEQYIYHSKGHALNPGQRNWTRYQPWE 153


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