BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006886
         (984 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arab...   250   3e-64
ref|XP_002874842.1| F-box family protein [Arabidopsis lyrata sub...   239   7e-61
ref|NP_567294.1| F-box protein SKIP19 [Arabidopsis thaliana] gi|...   235   1e-59
gb|AAM65310.1| F-box protein family, AtFBL20 [Arabidopsis thaliana]   234   3e-59
ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus ...   233   4e-59

>ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arabidopsis lyrata subsp.
            lyrata] gi|297320680|gb|EFH51102.1| hypothetical protein
            ARALYDRAFT_911810 [Arabidopsis lyrata subsp. lyrata]
          Length = 610

 Score =  250 bits (639), Expect = 3e-64
 Identities = 126/241 (52%), Positives = 168/241 (69%)
 Frame = -2

Query: 725  NWLDLPADITANILHRLGAIEILESAQKVCTAWRRICKDPAMWRVIDMQNHGDLGDMPFD 546
            NW +LP ++T++IL RLG I+ILE+AQKVC +WRR+CKDP+MWR IDM N GDLG M +D
Sbjct: 346  NWAELPPELTSSILGRLGTIDILENAQKVCRSWRRVCKDPSMWRKIDMDNLGDLGAMGYD 405

Query: 545  LEKMCMHAIDRSQGQLVDITIEYFGTDELMEYLAQGGRSSQLKRLQISCCYGMIYESWSE 366
            LE MC HA+DRSQG LV+I I YFGTDEL+ Y+A   RSS L+ L++  CY +  E + E
Sbjct: 406  LEIMCRHAVDRSQGGLVEIDIWYFGTDELLNYIAD--RSSNLRTLRLIMCYPIADEGFIE 463

Query: 365  FLKKSPLLEEIELTFADISEEAVANAGQYCPMLKIFKYNDRGYMHDGRAFSQEIADYSDE 186
             + K PL+E +EL+   +S E++   GQ CP LK  K N          F+ +  ++++E
Sbjct: 464  AVVKLPLIEYLELSHCSLSGESLKVVGQSCPNLKTLKLNS----EPDPKFNDD--EFNNE 517

Query: 185  FVMAIAKGMPQLRHLELIGNAMTNKGLQAILDGCPQLESLDLRRCFYINLDGSFGKLCME 6
              +AIA+ MP+LRHL+L GN +TN GL AILDGCP LE LDLR+C  ++L G   K C+E
Sbjct: 518  EALAIAESMPELRHLQLFGNILTNVGLNAILDGCPHLEHLDLRKCSNVDLTGDLEKRCVE 577

Query: 5    R 3
            R
Sbjct: 578  R 578



 Score =  229 bits (583), Expect = 1e-57
 Identities = 115/247 (46%), Positives = 165/247 (66%), Gaps = 6/247 (2%)
 Frame = -2

Query: 725 NWLDLPADITANILHRLGAIEILESAQKVCTAWRRICKDPAMWRVIDMQNHGDLGDMPFD 546
           NW +LPA++T++IL RLG +EILE+AQKVC +WRR+CKDP+MWR I + N G+     +D
Sbjct: 8   NWAELPAELTSSILLRLGVVEILENAQKVCRSWRRVCKDPSMWRKIVIDNSGNRDIFKYD 67

Query: 545 LEKMCMHAIDRSQGQLVDITIEYFGTDELMEYLAQG------GRSSQLKRLQISCCYGMI 384
           L+ MC HA+DRSQG L++I IEYFGTD+L++Y+A          SS L+ L++  C+ + 
Sbjct: 68  LDSMCRHAVDRSQGGLLEIDIEYFGTDKLLDYIADRFSLSLFSISSNLRSLRLVRCHQIT 127

Query: 383 YESWSEFLKKSPLLEEIELTFADISEEAVANAGQYCPMLKIFKYNDRGYMHDGRAFSQEI 204
            +  +E + K PLLE++E+++   S E ++  GQ CP L   K N R  +       + +
Sbjct: 128 DKGVAEAVVKLPLLEDLEVSYCSFSGECLSVVGQSCPHLTTLKLNRRPRV-------EFV 180

Query: 203 ADYSDEFVMAIAKGMPQLRHLELIGNAMTNKGLQAILDGCPQLESLDLRRCFYINLDGSF 24
            +  D   +AIA+ MP+LRHL+L+GNA+TN GL AILD C  L+ LDLR+C+ INL   F
Sbjct: 181 INMRDHNAIAIAESMPELRHLQLLGNALTNTGLNAILDSCTHLDHLDLRQCYNINLVEDF 240

Query: 23  GKLCMER 3
            K C+ER
Sbjct: 241 MKQCVER 247


>ref|XP_002874842.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320679|gb|EFH51101.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 308

 Score =  239 bits (610), Expect = 7e-61
 Identities = 127/255 (49%), Positives = 172/255 (67%)
 Frame = -2

Query: 767 TSKPKAMRKWVKKTNWLDLPADITANILHRLGAIEILESAQKVCTAWRRICKDPAMWRVI 588
           +S P AM     + NW +LP ++T+ ILHRLGAIEILE+AQKVC +WRR+CKDP+MWR I
Sbjct: 4   SSLPPAMEVGESR-NWTELPPELTSLILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKI 62

Query: 587 DMQNHGDLGDMPFDLEKMCMHAIDRSQGQLVDITIEYFGTDELMEYLAQGGRSSQLKRLQ 408
           DM N GDL DM F+L+ MC HA+DRSQG LV+I I YFGTD L+ Y+A   RSS L+ L+
Sbjct: 63  DMHNLGDLEDMEFNLDIMCRHAVDRSQGGLVEIDIWYFGTDGLLNYIAD--RSSNLRSLR 120

Query: 407 ISCCYGMIYESWSEFLKKSPLLEEIELTFADISEEAVANAGQYCPMLKIFKYNDRGYMHD 228
           ++ C  +  +   E + K PLLE++EL++  +S  ++   GQ CP +KI K         
Sbjct: 121 LTRCSQITDDGLVEAVLKLPLLEDLELSYCSLSGVSLKVLGQSCPNMKILKL-------- 172

Query: 227 GRAFSQEIADYSDEFVMAIAKGMPQLRHLELIGNAMTNKGLQAILDGCPQLESLDLRRCF 48
            +++ Q+    +D+  +AIA+ MP+LRHL+L GN +++ GL AILD C  LE LDLRRCF
Sbjct: 173 -KSYPQK---ENDDDALAIAETMPKLRHLQLFGNGLSDTGLNAILDSCLNLEHLDLRRCF 228

Query: 47  YINLDGSFGKLCMER 3
            +NL G   K C ER
Sbjct: 229 NVNLIGDLQKRCSER 243


>ref|NP_567294.1| F-box protein SKIP19 [Arabidopsis thaliana]
           gi|75335768|sp|Q9M0U9.1|SKI19_ARATH RecName: Full=F-box
           protein SKIP19; AltName: Full=F-box/LRR-repeat protein
           20; AltName: Full=SKP1-interacting partner 19
           gi|7267306|emb|CAB81088.1| N7 like-protein [Arabidopsis
           thaliana] gi|27765050|gb|AAO23646.1| At4g05460
           [Arabidopsis thaliana] gi|110742947|dbj|BAE99368.1| N7
           like-protein [Arabidopsis thaliana]
           gi|332657123|gb|AEE82523.1| F-box protein SKIP19
           [Arabidopsis thaliana]
          Length = 302

 Score =  235 bits (600), Expect = 1e-59
 Identities = 125/254 (49%), Positives = 165/254 (64%)
 Frame = -2

Query: 767 TSKPKAMRKWVKKTNWLDLPADITANILHRLGAIEILESAQKVCTAWRRICKDPAMWRVI 588
           +S P A  +  + TNW +LP ++T+ ILHRLGAIEILE+AQKVC +WRR+CKDP+MWR I
Sbjct: 4   SSSPPAAMEVGESTNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKI 63

Query: 587 DMQNHGDLGDMPFDLEKMCMHAIDRSQGQLVDITIEYFGTDELMEYLAQGGRSSQLKRLQ 408
           DM N GDL DM ++LE MC HA+DRSQG LVDI I YFGT +L+ Y+A   RSS L+ L+
Sbjct: 64  DMHNLGDLDDMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAH--RSSNLRSLR 121

Query: 407 ISCCYGMIYESWSEFLKKSPLLEEIELTFADISEEAVANAGQYCPMLKIFKYNDRGYMHD 228
           +  C  +  + + E + K P LEE+EL++   S E++   GQ C  +K  K N       
Sbjct: 122 LIRCSQITDDGFVEAVVKLP-LEELELSYCSFSVESLRVVGQCCLNMKTLKLNKHPQKE- 179

Query: 227 GRAFSQEIADYSDEFVMAIAKGMPQLRHLELIGNAMTNKGLQAILDGCPQLESLDLRRCF 48
                      +D+  +AIA+ MP+LRHL+L GN +++ GL AILD C  LE LDLRRCF
Sbjct: 180 -----------NDDDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCF 228

Query: 47  YINLDGSFGKLCME 6
            +NL G   K C E
Sbjct: 229 NVNLVGDLQKRCFE 242


>gb|AAM65310.1| F-box protein family, AtFBL20 [Arabidopsis thaliana]
          Length = 302

 Score =  234 bits (596), Expect = 3e-59
 Identities = 124/254 (48%), Positives = 165/254 (64%)
 Frame = -2

Query: 767 TSKPKAMRKWVKKTNWLDLPADITANILHRLGAIEILESAQKVCTAWRRICKDPAMWRVI 588
           +S P A  +  + TNW +LP ++T+ ILHRLGAIEILE+AQKVC +WRR+CKDP+MWR I
Sbjct: 4   SSSPPAAMEVGESTNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKI 63

Query: 587 DMQNHGDLGDMPFDLEKMCMHAIDRSQGQLVDITIEYFGTDELMEYLAQGGRSSQLKRLQ 408
           DM N GDL DM ++LE MC HA+DRSQG LVDI I YFGT +L+ Y+A   RSS L+ L+
Sbjct: 64  DMHNLGDLDDMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAH--RSSNLRSLR 121

Query: 407 ISCCYGMIYESWSEFLKKSPLLEEIELTFADISEEAVANAGQYCPMLKIFKYNDRGYMHD 228
           +  C  +  + + E + K P LEE+EL++   S E++   GQ C  +K  K N       
Sbjct: 122 LIRCSQITDDGFVEAVVKLP-LEELELSYCSFSVESLRVVGQCCLNMKTLKLNKHPQKE- 179

Query: 227 GRAFSQEIADYSDEFVMAIAKGMPQLRHLELIGNAMTNKGLQAILDGCPQLESLDLRRCF 48
                      +D+  +AIA+ +P+LRHL+L GN +++ GL AILD C  LE LDLRRCF
Sbjct: 180 -----------NDDDALAIAETIPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCF 228

Query: 47  YINLDGSFGKLCME 6
            +NL G   K C E
Sbjct: 229 NVNLVGDLQKRCFE 242


>ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223534044|gb|EEF35763.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 305

 Score =  233 bits (595), Expect = 4e-59
 Identities = 114/241 (47%), Positives = 164/241 (68%)
 Frame = -2

Query: 725 NWLDLPADITANILHRLGAIEILESAQKVCTAWRRICKDPAMWRVIDMQNHGDLGDMPFD 546
           NW +LP D+TA IL ++GA +IL SAQ VC++W  +CKDP+MWR +++    D  D+PFD
Sbjct: 18  NWAELPRDVTALILDKVGAFDILGSAQFVCSSWNSVCKDPSMWRSVEIHPLCDFWDLPFD 77

Query: 545 LEKMCMHAIDRSQGQLVDITIEYFGTDELMEYLAQGGRSSQLKRLQISCCYGMIYESWSE 366
           LE +C +A+DRS+G L+ I+IEYF TD L++Y+A   RSS LKRL++   Y +   ++S+
Sbjct: 78  LEALCRNAVDRSRGGLISISIEYFATDSLIKYIAD--RSSHLKRLRLLSSYTLSDAAFSK 135

Query: 365 FLKKSPLLEEIELTFADISEEAVANAGQYCPMLKIFKYNDRGYMHDGRAFSQEIADYSDE 186
             KK PLLEE+++++  +S EA+   G  CP+L+  K N +GY              S+E
Sbjct: 136 AAKKFPLLEELDISYCSLSTEALVGVGISCPLLRSLKLNCQGYKRPHIE--------SNE 187

Query: 185 FVMAIAKGMPQLRHLELIGNAMTNKGLQAILDGCPQLESLDLRRCFYINLDGSFGKLCME 6
             +AI + MP LR+L++ GN +TN G+QAILDGCP LE LDLR+CF ++L+G  G LC E
Sbjct: 188 EALAIGQWMPHLRYLQIFGNKLTNDGVQAILDGCPHLEFLDLRQCFNVHLEGELGMLCGE 247

Query: 5   R 3
           R
Sbjct: 248 R 248