BLASTX nr result

ID: Cnidium21_contig00006863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006863
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|4DNQ|A Chain A, Crystal Structure Of Dad2 S96a Mutant gi|414...    82   5e-14
pdb|4DNP|A Chain A, Crystal Structure Of Dad2                          82   5e-14
gb|AFR68698.1| DAD2 [Petunia x hybrida]                                82   5e-14
emb|CBI19405.3| unnamed protein product [Vitis vinifera]               78   7e-13
ref|XP_002285308.1| PREDICTED: sigma factor sigB regulation prot...    78   7e-13

>pdb|4DNQ|A Chain A, Crystal Structure Of Dad2 S96a Mutant
           gi|414145490|pdb|4DNQ|B Chain B, Crystal Structure Of
           Dad2 S96a Mutant gi|414145491|pdb|4DNQ|C Chain C,
           Crystal Structure Of Dad2 S96a Mutant
           gi|414145492|pdb|4DNQ|D Chain D, Crystal Structure Of
           Dad2 S96a Mutant gi|414145493|pdb|4DNQ|E Chain E,
           Crystal Structure Of Dad2 S96a Mutant
           gi|414145494|pdb|4DNQ|F Chain F, Crystal Structure Of
           Dad2 S96a Mutant gi|414145495|pdb|4DNQ|G Chain G,
           Crystal Structure Of Dad2 S96a Mutant
           gi|414145496|pdb|4DNQ|H Chain H, Crystal Structure Of
           Dad2 S96a Mutant gi|414145497|pdb|4DNQ|I Chain I,
           Crystal Structure Of Dad2 S96a Mutant
           gi|414145498|pdb|4DNQ|J Chain J, Crystal Structure Of
           Dad2 S96a Mutant gi|414145499|pdb|4DNQ|K Chain K,
           Crystal Structure Of Dad2 S96a Mutant
           gi|414145500|pdb|4DNQ|L Chain L, Crystal Structure Of
           Dad2 S96a Mutant
          Length = 269

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 41/46 (89%), Positives = 42/46 (91%)
 Frame = -3

Query: 356 VPASVATYLKNHLGGRNTVVMLNIEGHLPHLSAPGLLAQELLRALS 219
           VPASVATYLKNHLGG+NTV  LNIEGHLPHLSAP LLAQEL RALS
Sbjct: 222 VPASVATYLKNHLGGKNTVHWLNIEGHLPHLSAPTLLAQELRRALS 267


>pdb|4DNP|A Chain A, Crystal Structure Of Dad2
          Length = 269

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 41/46 (89%), Positives = 42/46 (91%)
 Frame = -3

Query: 356 VPASVATYLKNHLGGRNTVVMLNIEGHLPHLSAPGLLAQELLRALS 219
           VPASVATYLKNHLGG+NTV  LNIEGHLPHLSAP LLAQEL RALS
Sbjct: 222 VPASVATYLKNHLGGKNTVHWLNIEGHLPHLSAPTLLAQELRRALS 267


>gb|AFR68698.1| DAD2 [Petunia x hybrida]
          Length = 267

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 41/46 (89%), Positives = 42/46 (91%)
 Frame = -3

Query: 356 VPASVATYLKNHLGGRNTVVMLNIEGHLPHLSAPGLLAQELLRALS 219
           VPASVATYLKNHLGG+NTV  LNIEGHLPHLSAP LLAQEL RALS
Sbjct: 220 VPASVATYLKNHLGGKNTVHWLNIEGHLPHLSAPTLLAQELRRALS 265


>emb|CBI19405.3| unnamed protein product [Vitis vinifera]
          Length = 167

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 39/47 (82%), Positives = 40/47 (85%)
 Frame = -3

Query: 356 VPASVATYLKNHLGGRNTVVMLNIEGHLPHLSAPGLLAQELLRALSR 216
           VP SVA YLKNHLGGRNTV MLN+EGHLPHLSAP LLA  L RALSR
Sbjct: 121 VPTSVALYLKNHLGGRNTVEMLNVEGHLPHLSAPMLLAPVLRRALSR 167


>ref|XP_002285308.1| PREDICTED: sigma factor sigB regulation protein rsbQ [Vitis
           vinifera]
          Length = 266

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 39/47 (82%), Positives = 40/47 (85%)
 Frame = -3

Query: 356 VPASVATYLKNHLGGRNTVVMLNIEGHLPHLSAPGLLAQELLRALSR 216
           VP SVA YLKNHLGGRNTV MLN+EGHLPHLSAP LLA  L RALSR
Sbjct: 220 VPTSVALYLKNHLGGRNTVEMLNVEGHLPHLSAPMLLAPVLRRALSR 266


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